# pml automagically-generated by psntools 1.0

# molecule file name, you can change it with an other file of the same molecule
mol_file_name = "gq_nucleotide.pdb"

# cartoon color definition, change it as you please
set_color cartoon_color, [ 0.60, 0.60, 0.60 ]

# color definitions, change them as you please
set_color color_value_from_0_to_10,   [ 0.00, 0.00, 0.00 ]
set_color color_value_from_10_to_20,  [ 0.10, 0.10, 0.10 ]
set_color color_value_from_20_to_30,  [ 0.30, 0.30, 0.30 ]
set_color color_value_from_30_to_40,  [ 0.60, 0.60, 0.60 ]
set_color color_value_from_40_to_50,  [ 0.00, 0.00, 1.00 ]
set_color color_value_from_50_to_60,  [ 0.00, 0.50, 1.00 ]
set_color color_value_from_60_to_70,  [ 0.00, 1.00, 0.00 ]
set_color color_value_from_70_to_80,  [ 1.00, 1.00, 0.00 ]
set_color color_value_from_80_to_90,  [ 1.00, 0.60, 0.00 ]
set_color color_value_from_90_to_100, [ 1.00, 0.00, 0.00 ]

# consurf colors, change them as you please
set_color color_consurf_0, [ 0.00, 0.00, 0.00 ]
set_color color_consurf_1, [ 0.06, 0.78, 0.82 ]
set_color color_consurf_2, [ 0.55, 1.00, 1.00 ]
set_color color_consurf_3, [ 0.84, 1.00, 1.00 ]
set_color color_consurf_4, [ 0.92, 1.00, 1.00 ]
set_color color_consurf_5, [ 1.00, 1.00, 1.00 ]
set_color color_consurf_6, [ 0.99, 0.93, 0.96 ]
set_color color_consurf_7, [ 0.98, 0.79, 0.87 ]
set_color color_consurf_8, [ 0.94, 0.49, 0.67 ]
set_color color_consurf_9, [ 0.63, 0.15, 0.38 ]

# color definitions, change them as you please
set_color color_num_0,   [ 0.00, 0.00, 0.00 ]
set_color color_num_1,   [ 1.00, 0.00, 0.00 ]
set_color color_num_2,   [ 0.00, 1.00, 0.00 ]
set_color color_num_3,   [ 0.00, 0.00, 1.00 ]
set_color color_num_4,   [ 1.00, 1.00, 0.00 ]
set_color color_num_5,   [ 0.00, 1.00, 1.00 ]
set_color color_num_6,   [ 1.00, 0.00, 1.00 ]
set_color color_num_7,   [ 0.80, 1.00, 0.00 ]
set_color color_num_8,   [ 1.00, 0.70, 0.70 ]
set_color color_num_9,   [ 1.00, 0.70, 0.20 ]
set_color color_num_10,  [ 0.00, 0.60, 1.00 ]
set_color color_num_11,  [ 0.54, 0.31, 0.64 ]
set_color color_num_12,  [ 1.00, 0.50, 1.00 ]
set_color color_num_13,  [ 0.20, 0.60, 0.20 ]
set_color color_num_14,  [ 1.00, 0.12, 0.00 ]
set_color color_num_15,  [ 1.00, 0.24, 0.00 ]
set_color color_num_16,  [ 1.00, 0.36, 0.00 ]
set_color color_num_17,  [ 1.00, 0.48, 0.00 ]
set_color color_num_18,  [ 1.00, 0.60, 0.00 ]
set_color color_num_19,  [ 1.00, 0.72, 0.00 ]
set_color color_num_20,  [ 1.00, 0.84, 0.00 ]
set_color color_num_21,  [ 1.00, 0.96, 0.00 ]
set_color color_num_22,  [ 0.92, 1.00, 0.00 ]
set_color color_num_23,  [ 0.80, 1.00, 0.00 ]
set_color color_num_24,  [ 0.68, 1.00, 0.00 ]
set_color color_num_25,  [ 0.56, 1.00, 0.00 ]
set_color color_num_26,  [ 0.44, 1.00, 0.00 ]
set_color color_num_27,  [ 0.32, 1.00, 0.00 ]
set_color color_num_28,  [ 0.20, 1.00, 0.00 ]
set_color color_num_29,  [ 0.08, 1.00, 0.00 ]
set_color color_num_30,  [ 0.00, 1.00, 0.04 ]
set_color color_num_31,  [ 0.00, 1.00, 0.16 ]
set_color color_num_32,  [ 0.00, 1.00, 0.28 ]
set_color color_num_33,  [ 0.00, 1.00, 0.40 ]
set_color color_num_34,  [ 0.00, 1.00, 0.52 ]
set_color color_num_35,  [ 0.00, 1.00, 0.64 ]
set_color color_num_36,  [ 0.00, 1.00, 0.76 ]
set_color color_num_37,  [ 0.00, 1.00, 0.88 ]
set_color color_num_38,  [ 0.00, 1.00, 1.00 ]
set_color color_num_39,  [ 0.00, 0.88, 1.00 ]
set_color color_num_40,  [ 0.00, 0.76, 1.00 ]
set_color color_num_41,  [ 0.00, 0.64, 1.00 ]
set_color color_num_42,  [ 0.00, 0.52, 1.00 ]
set_color color_num_43,  [ 0.00, 0.40, 1.00 ]
set_color color_num_44,  [ 0.00, 0.28, 1.00 ]
set_color color_num_45,  [ 0.00, 0.16, 1.00 ]
set_color color_num_46,  [ 0.00, 0.04, 1.00 ]
set_color color_num_47,  [ 0.08, 0.00, 1.00 ]
set_color color_num_48,  [ 0.20, 0.00, 1.00 ]
set_color color_num_49,  [ 0.32, 0.00, 1.00 ]
set_color color_num_50,  [ 0.44, 0.00, 1.00 ]
set_color color_num_51,  [ 0.56, 0.00, 1.00 ]
set_color color_num_52,  [ 0.68, 0.00, 1.00 ]
set_color color_num_53,  [ 0.80, 0.00, 1.00 ]
set_color color_num_54,  [ 0.92, 0.00, 1.00 ]
set_color color_num_55,  [ 1.00, 0.00, 0.96 ]
set_color color_num_56,  [ 1.00, 0.00, 0.84 ]
set_color color_num_57,  [ 1.00, 0.00, 0.72 ]
set_color color_num_58,  [ 1.00, 0.00, 0.60 ]
set_color color_num_59,  [ 1.00, 0.00, 0.48 ]
set_color color_num_60,  [ 1.00, 0.00, 0.36 ]
set_color color_num_61,  [ 1.00, 0.00, 0.24 ]
set_color color_num_62,  [ 1.00, 0.00, 0.12 ]

# fixed size radius used for clusters and communities, change them as you please
link_fixed_size_value = 4.0
node_fixed_size_value = 1.0
hub_fixed_size_value  = 1.8

# link size definitions, change them as you please
link_size_value_from_0_to_10   = 2.5
link_size_value_from_10_to_20  = 3.0
link_size_value_from_20_to_30  = 3.5
link_size_value_from_30_to_40  = 4.0
link_size_value_from_40_to_50  = 4.5
link_size_value_from_50_to_60  = 5.0
link_size_value_from_60_to_70  = 5.5
link_size_value_from_70_to_80  = 6.0
link_size_value_from_80_to_90  = 6.5
link_size_value_from_90_to_100 = 7.0

# node size definitions, change them as you please
node_size_value_from_0_to_10   = 0.5
node_size_value_from_10_to_20  = 0.6
node_size_value_from_20_to_30  = 0.7
node_size_value_from_30_to_40  = 0.8
node_size_value_from_40_to_50  = 0.9
node_size_value_from_50_to_60  = 1.0
node_size_value_from_60_to_70  = 1.1
node_size_value_from_70_to_80  = 1.2
node_size_value_from_80_to_90  = 1.3
node_size_value_from_90_to_100 = 1.4

# diff colors definitions, change them as you please
set_color net1_items_color,   [ 1.0, 0.5, 0.0 ]
set_color shared_items_color, [ 0.5, 1.0, 0.0 ]
set_color net2_items_color,   [ 0.8, 0.5, 1.0 ]

# pert colors definitions, change them as you please
set_color color_pert_neg_75_100, [ 0.00, 0.00, 1.00 ]
set_color color_pert_neg_50_75,  [ 0.00, 0.37, 1.00 ]
set_color color_pert_neg_25_50,  [ 0.00, 0.75, 1.00 ]
set_color color_pert_neg_0_25,   [ 0.00, 1.00, 1.00 ]
set_color color_pert_zero,       [ 1.00, 1.00, 1.00 ]
set_color color_pert_pos_75_100, [ 1.00, 0.00, 0.00 ]
set_color color_pert_pos_50_75,  [ 1.00, 0.37, 0.00 ]
set_color color_pert_pos_25_50,  [ 1.00, 0.75, 0.00 ]
set_color color_pert_pos_0_25,   [ 1.00, 1.00, 0.00 ]

# some other graphic settings, change them as you please
cartoon automatic
set cartoon_smooth_loops=0
set cartoon_fancy_helices=1
set transparency_mode=1
set ray_shadows=0
set ray_transparency_shadows=0
set cartoon_transparency=0.6
bg_color white
set ortho=on
set depth_cue=off
set ray_trace_fog=0
set antialias=1
set dash_gap,0.0
set dash_round_ends,on
set dash_width,3.0
set dash_radius,0.0
print("this is gq_nucleotide_metapath.pml")



# =========================================== #
# PLEASE DO NOT EDIT ANYTHING BELOW THIS LINE #
# =========================================== #



cmd.load(mol_file_name, "molcart")
dss molcart
hide everything, molcart
color cartoon_color, molcart
show cartoon, molcart

sele notpol, molcart and not polymer
show sticks, notpol
cmd.load(mol_file_name, "psg")
hide everything, psg
# link: 7x34 7x35
cmd.dist("link1", "psg and R/R/306/CA", "psg and R/R/307/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_5, link1
# link: 3x43 6x45
cmd.dist("link2", "psg and R/R/142/CA", "psg and R/R/269/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_9, link2
# link: 6x45 6x48
cmd.dist("link3", "psg and R/R/269/CA", "psg and R/R/273/CA", label = 0, width = link_size_value_from_80_to_90)
color color_consurf_9, link3
# link: 6x48 6x52
cmd.dist("link4", "psg and R/R/273/CA", "psg and R/R/277/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_8, link4
# link: 6x51 6x52
cmd.dist("link5", "psg and R/R/276/CA", "psg and R/R/277/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_8, link5
# link: 6x51 7x34
cmd.dist("link6", "psg and R/R/276/CA", "psg and R/R/306/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_6, link6
# link: 2x40 I1
cmd.dist("link7", "psg and R/R/87/CA", "psg and R/R/83/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_7, link7
# link: 2x37 2x40
cmd.dist("link8", "psg and R/R/84/CA", "psg and R/R/87/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_7, link8
# link: 2x37 G.H5.22
cmd.dist("link9", "psg and R/R/84/CA", "psg and A/A/355/CA", label = 0, width = link_size_value_from_70_to_80)
color color_consurf_6, link9
# link: 2x39 G.H5.22
cmd.dist("link10", "psg and R/R/86/CA", "psg and A/A/355/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_6, link10
# link: 2x39 3x46
cmd.dist("link11", "psg and R/R/86/CA", "psg and R/R/145/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_8, link11
# link: 3x46 7x53
cmd.dist("link12", "psg and R/R/145/CA", "psg and R/R/324/CA", label = 0, width = link_size_value_from_60_to_70)
color color_consurf_9, link12
# link: 3x43 7x53
cmd.dist("link13", "psg and R/R/142/CA", "psg and R/R/324/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_9, link13
# link: G.H5.22 G.H5.23
cmd.dist("link14", "psg and A/A/355/CA", "psg and A/A/356/CA", label = 0, width = link_size_value_from_80_to_90)
color color_consurf_4, link14
# link: 3x50 G.H5.23
cmd.dist("link15", "psg and R/R/149/CA", "psg and A/A/356/CA", label = 0, width = link_size_value_from_60_to_70)
color color_consurf_7, link15
# link: 3x50 7x53
cmd.dist("link16", "psg and R/R/149/CA", "psg and R/R/324/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_9, link16
# link: I1 b.l25x4
cmd.dist("link17", "psg and R/R/83/CA", "psg and B/B/312/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_6, link17
# link: 7x38 E2x52
cmd.dist("link18", "psg and R/R/310/CA", "psg and R/R/204/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_6, link18
# link: 7x34 7x38
cmd.dist("link19", "psg and R/R/306/CA", "psg and R/R/310/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_5, link19
# link: 3x50 G.H5.25
cmd.dist("link20", "psg and R/R/149/CA", "psg and A/A/358/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_9, link20
# link: G.H5.20 G.H5.25
cmd.dist("link21", "psg and A/A/353/CA", "psg and A/A/358/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_8, link21
# link: 6x31 G.H5.20
cmd.dist("link22", "psg and R/R/255/CA", "psg and A/A/353/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_7, link22
# link: 6x31 G.H5.13
cmd.dist("link23", "psg and R/R/255/CA", "psg and A/A/346/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_7, link23
# link: b.l25x4 b.l27x2
cmd.dist("link24", "psg and B/B/312/CA", "psg and B/B/333/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_7, link24
# link: b.l25x3 b.l27x2
cmd.dist("link25", "psg and B/B/311/CA", "psg and B/B/333/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_9, link25
# link: b.b27x3 b.l25x3
cmd.dist("link26", "psg and B/B/329/CA", "psg and B/B/311/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_9, link26
# link: b.b27x3 b.b28x6
cmd.dist("link27", "psg and B/B/329/CA", "psg and B/B/339/CA", label = 0, width = link_size_value_from_60_to_70)
color color_consurf_9, link27
# link: b.b28x6 b.lhb1x11
cmd.dist("link28", "psg and B/B/339/CA", "psg and B/B/45/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_7, link28
# link: b.b28x7 b.lhb1x11
cmd.dist("link29", "psg and B/B/340/CA", "psg and B/B/45/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_7, link29
# link: b.b28x7 g.ctx16
cmd.dist("link30", "psg and B/B/340/CA", "psg and G/G/61/CA", label = 0, width = link_size_value_from_60_to_70)
color color_consurf_9, link30
# link: b.l4x1 g.ctx16
cmd.dist("link31", "psg and B/B/84/CA", "psg and G/G/61/CA", label = 0, width = link_size_value_from_60_to_70)
color color_consurf_7, link31
# link: b.b2x5 b.l4x1
cmd.dist("link32", "psg and B/B/63/CA", "psg and B/B/84/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_6, link32
# link: b.b2x5 b.b3x2
cmd.dist("link33", "psg and B/B/63/CA", "psg and B/B/70/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_6, link33
# link: b.b3x2 b.b4x6
cmd.dist("link34", "psg and B/B/70/CA", "psg and B/B/82/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_7, link34
# link: b.b4x6 b.l1x3
cmd.dist("link35", "psg and B/B/82/CA", "psg and B/B/54/CA", label = 0, width = link_size_value_from_60_to_70)
color color_consurf_9, link35
# link: b.b28x4 b.l25x3
cmd.dist("link36", "psg and B/B/337/CA", "psg and B/B/311/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_8, link36
# link: b.b28x4 b.b28x6
cmd.dist("link37", "psg and B/B/337/CA", "psg and B/B/339/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_8, link37
# link: 5x44 6x55
cmd.dist("link38", "psg and R/R/222/CA", "psg and R/R/280/CA", label = 0, width = link_size_value_from_60_to_70)
color color_consurf_6, link38
# link: 6x41 7x53
cmd.dist("link39", "psg and R/R/265/CA", "psg and R/R/324/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_8, link39
# link: b.l1x3 b.l1x7
cmd.dist("link40", "psg and B/B/54/CA", "psg and B/B/58/CA", label = 0, width = link_size_value_from_70_to_80)
color color_consurf_9, link40
# link: b.b26x2 b.l1x7
cmd.dist("link41", "psg and B/B/317/CA", "psg and B/B/58/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_8, link41
# link: b.b26x1 b.b26x2
cmd.dist("link42", "psg and B/B/316/CA", "psg and B/B/317/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_8, link42
# link: b.b26x1 b.l27x1
cmd.dist("link43", "psg and B/B/316/CA", "psg and B/B/332/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_9, link43
# link: b.b2x1 b.l27x1
cmd.dist("link44", "psg and B/B/59/CA", "psg and B/B/332/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_9, link44
# link: G.H3.17 b.l27x1
cmd.dist("link45", "psg and A/A/263/CA", "psg and B/B/332/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_7, link45
# link: G.H3.15 G.H3.17
cmd.dist("link46", "psg and A/A/261/CA", "psg and A/A/263/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_7, link46
# link: G.H3.12 G.H3.15
cmd.dist("link47", "psg and A/A/258/CA", "psg and A/A/261/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_8, link47
# link: G.H3.12 G.S4.04
cmd.dist("link48", "psg and A/A/258/CA", "psg and A/A/228/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_9, link48
# link: b.lhb1x11 g.ctx5
cmd.dist("link49", "psg and B/B/45/CA", "psg and G/G/50/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_7, link49
# link: b.b23x1 g.ctx5
cmd.dist("link50", "psg and B/B/284/CA", "psg and G/G/50/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_7, link50
# link: b.b23x1 b.b24x5
cmd.dist("link51", "psg and B/B/284/CA", "psg and B/B/296/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_5, link51
# link: b.b24x5 b.b25x5
cmd.dist("link52", "psg and B/B/296/CA", "psg and B/B/306/CA", label = 0, width = link_size_value_from_10_to_20)
color color_consurf_5, link52
# link: b.b25x5 b.b25x6
cmd.dist("link53", "psg and B/B/306/CA", "psg and B/B/307/CA", label = 0, width = link_size_value_from_10_to_20)
color color_consurf_4, link53
# link: b.b24x2 b.b25x6
cmd.dist("link54", "psg and B/B/293/CA", "psg and B/B/307/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_4, link54
# link: b.b24x2 b.l23x2
cmd.dist("link55", "psg and B/B/293/CA", "psg and B/B/291/CA", label = 0, width = link_size_value_from_80_to_90)
color color_consurf_7, link55
# link: b.l21x7 b.l23x2
cmd.dist("link56", "psg and B/B/271/CA", "psg and B/B/291/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_7, link56
# link: b.l21x7 b.l21x8
cmd.dist("link57", "psg and B/B/271/CA", "psg and B/B/272/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_5, link57
# link: b.l21x8 b.l23x1
cmd.dist("link58", "psg and B/B/272/CA", "psg and B/B/290/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_5, link58
# link: b.l23x1 b.l25x6
cmd.dist("link59", "psg and B/B/290/CA", "psg and B/B/314/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_7, link59
# link: G.H3.17 b.l25x6
cmd.dist("link60", "psg and A/A/263/CA", "psg and B/B/314/CA", label = 0, width = link_size_value_from_60_to_70)
color color_consurf_7, link60
# link: G.H3.09 G.S4.04
cmd.dist("link61", "psg and A/A/255/CA", "psg and A/A/228/CA", label = 0, width = link_size_value_from_80_to_90)
color color_consurf_9, link61
# link: G.H3.09 G.h4s6.01
cmd.dist("link62", "psg and A/A/255/CA", "psg and A/A/316/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_7, link62
# link: G.H3.06 G.h4s6.01
cmd.dist("link63", "psg and A/A/252/CA", "psg and A/A/316/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_5, link63
# link: G.H3.03 G.H3.06
cmd.dist("link64", "psg and A/A/249/CA", "psg and A/A/252/CA", label = 0, width = link_size_value_from_80_to_90)
color color_consurf_5, link64
# link: G.H3.03 G.s4h3.15
cmd.dist("link65", "psg and A/A/249/CA", "psg and A/A/246/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_7, link65
# link: G.hgh4.02 G.s4h3.15
cmd.dist("link66", "psg and A/A/292/CA", "psg and A/A/246/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_9, link66
# link: G.HG.15 G.hgh4.02
cmd.dist("link67", "psg and A/A/288/CA", "psg and A/A/292/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_8, link67
# link: G.HG.15 G.s4h3.04
cmd.dist("link68", "psg and A/A/288/CA", "psg and A/A/235/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_8, link68
# link: G.H2.10 b.b2x1
cmd.dist("link69", "psg and A/A/219/CA", "psg and B/B/59/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_8, link69
# link: G.H2.10 b.b6x1
cmd.dist("link70", "psg and A/A/219/CA", "psg and B/B/101/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_8, link70
# link: b.b6x1 b.l9x6
cmd.dist("link71", "psg and B/B/101/CA", "psg and B/B/145/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_9, link71
# link: G.H2.07 b.l9x6
cmd.dist("link72", "psg and A/A/216/CA", "psg and B/B/145/CA", label = 0, width = link_size_value_from_80_to_90)
color color_consurf_9, link72
# link: G.H2.06 b.l9x6
cmd.dist("link73", "psg and A/A/215/CA", "psg and B/B/145/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_9, link73
# link: G.H2.06 b.l19x1
cmd.dist("link74", "psg and A/A/215/CA", "psg and B/B/246/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_9, link74
# link: b.l17x5 b.l19x1
cmd.dist("link75", "psg and B/B/227/CA", "psg and B/B/246/CA", label = 0, width = link_size_value_from_20_to_30)
color color_consurf_8, link75
# link: b.l17x5 b.l19x2
cmd.dist("link76", "psg and B/B/227/CA", "psg and B/B/247/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_8, link76
# link: b.l17x4 b.l19x2
cmd.dist("link77", "psg and B/B/226/CA", "psg and B/B/247/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_6, link77
# link: b.l17x3 b.l17x4
cmd.dist("link78", "psg and B/B/225/CA", "psg and B/B/226/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_6, link78
# link: b.b19x4 b.l17x3
cmd.dist("link79", "psg and B/B/243/CA", "psg and B/B/225/CA", label = 0, width = link_size_value_from_80_to_90)
color color_consurf_9, link79
# link: b.b19x4 b.b20x6
cmd.dist("link80", "psg and B/B/243/CA", "psg and B/B/253/CA", label = 0, width = link_size_value_from_70_to_80)
color color_consurf_7, link80
# link: b.b17x7 b.b20x6
cmd.dist("link81", "psg and B/B/222/CA", "psg and B/B/253/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_7, link81
# link: b.b17x5 b.b17x7
cmd.dist("link82", "psg and B/B/220/CA", "psg and B/B/222/CA", label = 0, width = link_size_value_from_70_to_80)
color color_consurf_8, link82
# link: b.b17x5 b.b21x1
cmd.dist("link83", "psg and B/B/220/CA", "psg and B/B/258/CA", label = 0, width = link_size_value_from_70_to_80)
color color_consurf_7, link83
# link: b.1x19 b.b21x1
cmd.dist("link84", "psg and B/B/22/CA", "psg and B/B/258/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_7, link84
# link: b.1x15 b.1x19
cmd.dist("link85", "psg and B/B/18/CA", "psg and B/B/22/CA", label = 0, width = link_size_value_from_70_to_80)
color color_consurf_7, link85
# link: b.1x14 b.1x15
cmd.dist("link86", "psg and B/B/17/CA", "psg and B/B/18/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_6, link86
# link: b.1x11 b.1x14
cmd.dist("link87", "psg and B/B/14/CA", "psg and B/B/17/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_6, link87
# link: b.1x11 g.h1x12
cmd.dist("link88", "psg and B/B/14/CA", "psg and G/G/20/CA", label = 0, width = link_size_value_from_20_to_30)
color color_consurf_7, link88
# link: g.h1x12 g.h1x8
cmd.dist("link89", "psg and G/G/20/CA", "psg and G/G/16/CA", label = 0, width = link_size_value_from_30_to_40)
color color_consurf_7, link89
# link: b.1x4 g.h1x8
cmd.dist("link90", "psg and B/B/7/CA", "psg and G/G/16/CA", label = 0, width = link_size_value_from_80_to_90)
color color_consurf_8, link90
# link: b.b19x6 b.l19x2
cmd.dist("link91", "psg and B/B/245/CA", "psg and B/B/247/CA", label = 0, width = link_size_value_from_70_to_80)
color color_consurf_9, link91
# link: b.b19x6 b.l17x3
cmd.dist("link92", "psg and B/B/245/CA", "psg and B/B/225/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_9, link92
# link: b.b20x2 b.l19x2
cmd.dist("link93", "psg and B/B/249/CA", "psg and B/B/247/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_8, link93
# link: b.b20x2 b.l17x3
cmd.dist("link94", "psg and B/B/249/CA", "psg and B/B/225/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_8, link94
# link: b.b20x4 b.l17x3
cmd.dist("link95", "psg and B/B/251/CA", "psg and B/B/225/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_9, link95
# link: b.b20x4 b.b20x6
cmd.dist("link96", "psg and B/B/251/CA", "psg and B/B/253/CA", label = 0, width = link_size_value_from_70_to_80)
color color_consurf_7, link96
# link: g.ctx3 g.ctx5
cmd.dist("link97", "psg and G/G/48/CA", "psg and G/G/50/CA", label = 0, width = link_size_value_from_50_to_60)
color color_consurf_9, link97
# link: b.b19x2 b.b20x6
cmd.dist("link98", "psg and B/B/241/CA", "psg and B/B/253/CA", label = 0, width = link_size_value_from_90_to_100)
color color_consurf_6, link98
# link: 5x44 6x52
cmd.dist("link99", "psg and R/R/222/CA", "psg and R/R/277/CA", label = 0, width = link_size_value_from_40_to_50)
color color_consurf_7, link99
# node: 7x34
sele node1, psg and R/R/306/CA
color color_consurf_4, node1
alter node1, vdw = node_size_value_from_70_to_80
show sphere, node1

# node: 7x35
sele node2, psg and R/R/307/CA
color color_consurf_5, node2
alter node2, vdw = node_size_value_from_80_to_90
show sphere, node2

# node: 3x43
sele node3, psg and R/R/142/CA
color color_consurf_8, node3
alter node3, vdw = node_size_value_from_40_to_50
show sphere, node3

# node: 6x45
sele node4, psg and R/R/269/CA
color color_consurf_9, node4
alter node4, vdw = node_size_value_from_60_to_70
show sphere, node4

# node: 6x48
sele node5, psg and R/R/273/CA
color color_consurf_8, node5
alter node5, vdw = node_size_value_from_70_to_80
show sphere, node5

# node: 6x52
sele node6, psg and R/R/277/CA
color color_consurf_8, node6
alter node6, vdw = node_size_value_from_90_to_100
show sphere, node6

# node: 6x51
sele node7, psg and R/R/276/CA
color color_consurf_7, node7
alter node7, vdw = node_size_value_from_60_to_70
show sphere, node7

# node: 2x40
sele node8, psg and R/R/87/CA
color color_consurf_7, node8
alter node8, vdw = node_size_value_from_70_to_80
show sphere, node8

# node: I1
sele node9, psg and R/R/83/CA
color color_consurf_6, node9
alter node9, vdw = node_size_value_from_90_to_100
show sphere, node9

# node: 2x37
sele node10, psg and R/R/84/CA
color color_consurf_7, node10
alter node10, vdw = node_size_value_from_40_to_50
show sphere, node10

# node: G.H5.22
sele node11, psg and A/A/355/CA
color color_consurf_4, node11
alter node11, vdw = node_size_value_from_60_to_70
show sphere, node11

# node: 2x39
sele node12, psg and R/R/86/CA
color color_consurf_7, node12
alter node12, vdw = node_size_value_from_60_to_70
show sphere, node12

# node: 3x46
sele node13, psg and R/R/145/CA
color color_consurf_8, node13
alter node13, vdw = node_size_value_from_50_to_60
show sphere, node13

# node: 7x53
sele node14, psg and R/R/324/CA
color color_consurf_9, node14
alter node14, vdw = node_size_value_from_60_to_70
show sphere, node14

# node: G.H5.23
sele node15, psg and A/A/356/CA
color color_consurf_4, node15
alter node15, vdw = node_size_value_from_80_to_90
show sphere, node15

# node: 3x50
sele node16, psg and R/R/149/CA
color color_consurf_9, node16
alter node16, vdw = node_size_value_from_90_to_100
show sphere, node16

# node: b.l25x4
sele node17, psg and B/B/312/CA
color color_consurf_5, node17
alter node17, vdw = node_size_value_from_50_to_60
show sphere, node17

# node: 7x38
sele node18, psg and R/R/310/CA
color color_consurf_5, node18
alter node18, vdw = node_size_value_from_80_to_90
show sphere, node18

# node: E2x52
sele node19, psg and R/R/204/CA
color color_consurf_6, node19
alter node19, vdw = node_size_value_from_80_to_90
show sphere, node19

# node: G.H5.25
sele node20, psg and A/A/358/CA
color color_consurf_8, node20
alter node20, vdw = node_size_value_from_90_to_100
show sphere, node20

# node: G.H5.20
sele node21, psg and A/A/353/CA
color color_consurf_8, node21
alter node21, vdw = node_size_value_from_40_to_50
show sphere, node21

# node: 6x31
sele node22, psg and R/R/255/CA
color color_consurf_6, node22
alter node22, vdw = node_size_value_from_70_to_80
show sphere, node22

# node: G.H5.13
sele node23, psg and A/A/346/CA
color color_consurf_8, node23
alter node23, vdw = node_size_value_from_90_to_100
show sphere, node23

# node: b.l27x2
sele node24, psg and B/B/333/CA
color color_consurf_9, node24
alter node24, vdw = node_size_value_from_90_to_100
show sphere, node24

# node: b.l25x3
sele node25, psg and B/B/311/CA
color color_consurf_9, node25
alter node25, vdw = node_size_value_from_90_to_100
show sphere, node25

# node: b.b27x3
sele node26, psg and B/B/329/CA
color color_consurf_8, node26
alter node26, vdw = node_size_value_from_50_to_60
show sphere, node26

# node: b.b28x6
sele node27, psg and B/B/339/CA
color color_consurf_9, node27
alter node27, vdw = node_size_value_from_90_to_100
show sphere, node27

# node: b.lhb1x11
sele node28, psg and B/B/45/CA
color color_consurf_4, node28
alter node28, vdw = node_size_value_from_40_to_50
show sphere, node28

# node: b.b28x7
sele node29, psg and B/B/340/CA
color color_consurf_9, node29
alter node29, vdw = node_size_value_from_60_to_70
show sphere, node29

# node: g.ctx16
sele node30, psg and G/G/61/CA
color color_consurf_8, node30
alter node30, vdw = node_size_value_from_60_to_70
show sphere, node30

# node: b.l4x1
sele node31, psg and B/B/84/CA
color color_consurf_5, node31
alter node31, vdw = node_size_value_from_50_to_60
show sphere, node31

# node: b.b2x5
sele node32, psg and B/B/63/CA
color color_consurf_7, node32
alter node32, vdw = node_size_value_from_90_to_100
show sphere, node32

# node: b.b3x2
sele node33, psg and B/B/70/CA
color color_consurf_5, node33
alter node33, vdw = node_size_value_from_90_to_100
show sphere, node33

# node: b.b4x6
sele node34, psg and B/B/82/CA
color color_consurf_9, node34
alter node34, vdw = node_size_value_from_80_to_90
show sphere, node34

# node: b.l1x3
sele node35, psg and B/B/54/CA
color color_consurf_9, node35
alter node35, vdw = node_size_value_from_60_to_70
show sphere, node35

# node: b.b28x4
sele node36, psg and B/B/337/CA
color color_consurf_6, node36
alter node36, vdw = node_size_value_from_90_to_100
show sphere, node36

# node: 5x44
sele node37, psg and R/R/222/CA
color color_consurf_5, node37
alter node37, vdw = node_size_value_from_50_to_60
show sphere, node37

# node: 6x55
sele node38, psg and R/R/280/CA
color color_consurf_6, node38
alter node38, vdw = node_size_value_from_50_to_60
show sphere, node38

# node: 6x41
sele node39, psg and R/R/265/CA
color color_consurf_7, node39
alter node39, vdw = node_size_value_from_30_to_40
show sphere, node39

# node: b.l1x7
sele node40, psg and B/B/58/CA
color color_consurf_9, node40
alter node40, vdw = node_size_value_from_60_to_70
show sphere, node40

# node: b.b26x2
sele node41, psg and B/B/317/CA
color color_consurf_7, node41
alter node41, vdw = node_size_value_from_40_to_50
show sphere, node41

# node: b.b26x1
sele node42, psg and B/B/316/CA
color color_consurf_9, node42
alter node42, vdw = node_size_value_from_30_to_40
show sphere, node42

# node: b.l27x1
sele node43, psg and B/B/332/CA
color color_consurf_9, node43
alter node43, vdw = node_size_value_from_90_to_100
show sphere, node43

# node: b.b2x1
sele node44, psg and B/B/59/CA
color color_consurf_8, node44
alter node44, vdw = node_size_value_from_90_to_100
show sphere, node44

# node: G.H3.17
sele node45, psg and A/A/263/CA
color color_consurf_5, node45
alter node45, vdw = node_size_value_from_70_to_80
show sphere, node45

# node: G.H3.15
sele node46, psg and A/A/261/CA
color color_consurf_8, node46
alter node46, vdw = node_size_value_from_30_to_40
show sphere, node46

# node: G.H3.12
sele node47, psg and A/A/258/CA
color color_consurf_8, node47
alter node47, vdw = node_size_value_from_30_to_40
show sphere, node47

# node: G.S4.04
sele node48, psg and A/A/228/CA
color color_consurf_9, node48
alter node48, vdw = node_size_value_from_70_to_80
show sphere, node48

# node: g.ctx5
sele node49, psg and G/G/50/CA
color color_consurf_9, node49
alter node49, vdw = node_size_value_from_40_to_50
show sphere, node49

# node: b.b23x1
sele node50, psg and B/B/284/CA
color color_consurf_5, node50
alter node50, vdw = node_size_value_from_40_to_50
show sphere, node50

# node: b.b24x5
sele node51, psg and B/B/296/CA
color color_consurf_5, node51
alter node51, vdw = node_size_value_from_30_to_40
show sphere, node51

# node: b.b25x5
sele node52, psg and B/B/306/CA
color color_consurf_4, node52
alter node52, vdw = node_size_value_from_10_to_20
show sphere, node52

# node: b.b25x6
sele node53, psg and B/B/307/CA
color color_consurf_3, node53
alter node53, vdw = node_size_value_from_30_to_40
show sphere, node53

# node: b.b24x2
sele node54, psg and B/B/293/CA
color color_consurf_5, node54
alter node54, vdw = node_size_value_from_40_to_50
show sphere, node54

# node: b.l23x2
sele node55, psg and B/B/291/CA
color color_consurf_8, node55
alter node55, vdw = node_size_value_from_50_to_60
show sphere, node55

# node: b.l21x7
sele node56, psg and B/B/271/CA
color color_consurf_5, node56
alter node56, vdw = node_size_value_from_30_to_40
show sphere, node56

# node: b.l21x8
sele node57, psg and B/B/272/CA
color color_consurf_4, node57
alter node57, vdw = node_size_value_from_30_to_40
show sphere, node57

# node: b.l23x1
sele node58, psg and B/B/290/CA
color color_consurf_6, node58
alter node58, vdw = node_size_value_from_90_to_100
show sphere, node58

# node: b.l25x6
sele node59, psg and B/B/314/CA
color color_consurf_8, node59
alter node59, vdw = node_size_value_from_90_to_100
show sphere, node59

# node: G.H3.09
sele node60, psg and A/A/255/CA
color color_consurf_9, node60
alter node60, vdw = node_size_value_from_70_to_80
show sphere, node60

# node: G.h4s6.01
sele node61, psg and A/A/316/CA
color color_consurf_4, node61
alter node61, vdw = node_size_value_from_50_to_60
show sphere, node61

# node: G.H3.06
sele node62, psg and A/A/252/CA
color color_consurf_6, node62
alter node62, vdw = node_size_value_from_60_to_70
show sphere, node62

# node: G.H3.03
sele node63, psg and A/A/249/CA
color color_consurf_4, node63
alter node63, vdw = node_size_value_from_60_to_70
show sphere, node63

# node: G.s4h3.15
sele node64, psg and A/A/246/CA
color color_consurf_9, node64
alter node64, vdw = node_size_value_from_30_to_40
show sphere, node64

# node: G.hgh4.02
sele node65, psg and A/A/292/CA
color color_consurf_8, node65
alter node65, vdw = node_size_value_from_40_to_50
show sphere, node65

# node: G.HG.15
sele node66, psg and A/A/288/CA
color color_consurf_7, node66
alter node66, vdw = node_size_value_from_40_to_50
show sphere, node66

# node: G.s4h3.04
sele node67, psg and A/A/235/CA
color color_consurf_8, node67
alter node67, vdw = node_size_value_from_80_to_90
show sphere, node67

# node: G.H2.10
sele node68, psg and A/A/219/CA
color color_consurf_7, node68
alter node68, vdw = node_size_value_from_50_to_60
show sphere, node68

# node: b.b6x1
sele node69, psg and B/B/101/CA
color color_consurf_9, node69
alter node69, vdw = node_size_value_from_40_to_50
show sphere, node69

# node: b.l9x6
sele node70, psg and B/B/145/CA
color color_consurf_8, node70
alter node70, vdw = node_size_value_from_60_to_70
show sphere, node70

# node: G.H2.07
sele node71, psg and A/A/216/CA
color color_consurf_9, node71
alter node71, vdw = node_size_value_from_60_to_70
show sphere, node71

# node: G.H2.06
sele node72, psg and A/A/215/CA
color color_consurf_9, node72
alter node72, vdw = node_size_value_from_70_to_80
show sphere, node72

# node: b.l19x1
sele node73, psg and B/B/246/CA
color color_consurf_9, node73
alter node73, vdw = node_size_value_from_50_to_60
show sphere, node73

# node: b.l17x5
sele node74, psg and B/B/227/CA
color color_consurf_6, node74
alter node74, vdw = node_size_value_from_40_to_50
show sphere, node74

# node: b.l19x2
sele node75, psg and B/B/247/CA
color color_consurf_9, node75
alter node75, vdw = node_size_value_from_80_to_90
show sphere, node75

# node: b.l17x4
sele node76, psg and B/B/226/CA
color color_consurf_3, node76
alter node76, vdw = node_size_value_from_80_to_90
show sphere, node76

# node: b.l17x3
sele node77, psg and B/B/225/CA
color color_consurf_9, node77
alter node77, vdw = node_size_value_from_80_to_90
show sphere, node77

# node: b.b19x4
sele node78, psg and B/B/243/CA
color color_consurf_8, node78
alter node78, vdw = node_size_value_from_70_to_80
show sphere, node78

# node: b.b20x6
sele node79, psg and B/B/253/CA
color color_consurf_6, node79
alter node79, vdw = node_size_value_from_70_to_80
show sphere, node79

# node: b.b17x7
sele node80, psg and B/B/222/CA
color color_consurf_8, node80
alter node80, vdw = node_size_value_from_90_to_100
show sphere, node80

# node: b.b17x5
sele node81, psg and B/B/220/CA
color color_consurf_7, node81
alter node81, vdw = node_size_value_from_50_to_60
show sphere, node81

# node: b.b21x1
sele node82, psg and B/B/258/CA
color color_consurf_7, node82
alter node82, vdw = node_size_value_from_90_to_100
show sphere, node82

# node: b.1x19
sele node83, psg and B/B/22/CA
color color_consurf_6, node83
alter node83, vdw = node_size_value_from_70_to_80
show sphere, node83

# node: b.1x15
sele node84, psg and B/B/18/CA
color color_consurf_7, node84
alter node84, vdw = node_size_value_from_50_to_60
show sphere, node84

# node: b.1x14
sele node85, psg and B/B/17/CA
color color_consurf_4, node85
alter node85, vdw = node_size_value_from_40_to_50
show sphere, node85

# node: b.1x11
sele node86, psg and B/B/14/CA
color color_consurf_8, node86
alter node86, vdw = node_size_value_from_30_to_40
show sphere, node86

# node: g.h1x12
sele node87, psg and G/G/20/CA
color color_consurf_6, node87
alter node87, vdw = node_size_value_from_20_to_30
show sphere, node87

# node: g.h1x8
sele node88, psg and G/G/16/CA
color color_consurf_7, node88
alter node88, vdw = node_size_value_from_40_to_50
show sphere, node88

# node: b.1x4
sele node89, psg and B/B/7/CA
color color_consurf_8, node89
alter node89, vdw = node_size_value_from_40_to_50
show sphere, node89

# node: b.b19x6
sele node90, psg and B/B/245/CA
color color_consurf_9, node90
alter node90, vdw = node_size_value_from_90_to_100
show sphere, node90

# node: b.b20x2
sele node91, psg and B/B/249/CA
color color_consurf_6, node91
alter node91, vdw = node_size_value_from_60_to_70
show sphere, node91

# node: b.b20x4
sele node92, psg and B/B/251/CA
color color_consurf_8, node92
alter node92, vdw = node_size_value_from_90_to_100
show sphere, node92

# node: g.ctx3
sele node93, psg and G/G/48/CA
color color_consurf_9, node93
alter node93, vdw = node_size_value_from_50_to_60
show sphere, node93

# node: b.b19x2
sele node94, psg and B/B/241/CA
color color_consurf_6, node94
alter node94, vdw = node_size_value_from_90_to_100
show sphere, node94

