# pml automagically-generated by psntools 1.0

# molecule file name, you can change it with an other file of the same molecule
mol_file_name = "8XWF.pdb"

# cartoon color definition, change it as you please
set_color cartoon_color, [ 0.60, 0.60, 0.60 ]

# color definitions, change them as you please
set_color color_value_from_0_to_10,   [ 0.00, 0.00, 0.00 ]
set_color color_value_from_10_to_20,  [ 0.10, 0.10, 0.10 ]
set_color color_value_from_20_to_30,  [ 0.30, 0.30, 0.30 ]
set_color color_value_from_30_to_40,  [ 0.60, 0.60, 0.60 ]
set_color color_value_from_40_to_50,  [ 0.00, 0.00, 1.00 ]
set_color color_value_from_50_to_60,  [ 0.00, 0.50, 1.00 ]
set_color color_value_from_60_to_70,  [ 0.00, 1.00, 0.00 ]
set_color color_value_from_70_to_80,  [ 1.00, 1.00, 0.00 ]
set_color color_value_from_80_to_90,  [ 1.00, 0.60, 0.00 ]
set_color color_value_from_90_to_100, [ 1.00, 0.00, 0.00 ]

# consurf colors, change them as you please
set_color color_consurf_0, [ 0.00, 0.00, 0.00 ]
set_color color_consurf_1, [ 0.06, 0.78, 0.82 ]
set_color color_consurf_2, [ 0.55, 1.00, 1.00 ]
set_color color_consurf_3, [ 0.84, 1.00, 1.00 ]
set_color color_consurf_4, [ 0.92, 1.00, 1.00 ]
set_color color_consurf_5, [ 1.00, 1.00, 1.00 ]
set_color color_consurf_6, [ 0.99, 0.93, 0.96 ]
set_color color_consurf_7, [ 0.98, 0.79, 0.87 ]
set_color color_consurf_8, [ 0.94, 0.49, 0.67 ]
set_color color_consurf_9, [ 0.63, 0.15, 0.38 ]

# color definitions, change them as you please
set_color color_num_0,   [ 0.00, 0.00, 0.00 ]
set_color color_num_1,   [ 1.00, 0.00, 0.00 ]
set_color color_num_2,   [ 0.00, 1.00, 0.00 ]
set_color color_num_3,   [ 0.00, 0.00, 1.00 ]
set_color color_num_4,   [ 1.00, 1.00, 0.00 ]
set_color color_num_5,   [ 0.00, 1.00, 1.00 ]
set_color color_num_6,   [ 1.00, 0.00, 1.00 ]
set_color color_num_7,   [ 0.80, 1.00, 0.00 ]
set_color color_num_8,   [ 1.00, 0.70, 0.70 ]
set_color color_num_9,   [ 1.00, 0.70, 0.20 ]
set_color color_num_10,  [ 0.00, 0.60, 1.00 ]
set_color color_num_11,  [ 0.54, 0.31, 0.64 ]
set_color color_num_12,  [ 1.00, 0.50, 1.00 ]
set_color color_num_13,  [ 0.20, 0.60, 0.20 ]
set_color color_num_14,  [ 1.00, 0.12, 0.00 ]
set_color color_num_15,  [ 1.00, 0.24, 0.00 ]
set_color color_num_16,  [ 1.00, 0.36, 0.00 ]
set_color color_num_17,  [ 1.00, 0.48, 0.00 ]
set_color color_num_18,  [ 1.00, 0.60, 0.00 ]
set_color color_num_19,  [ 1.00, 0.72, 0.00 ]
set_color color_num_20,  [ 1.00, 0.84, 0.00 ]
set_color color_num_21,  [ 1.00, 0.96, 0.00 ]
set_color color_num_22,  [ 0.92, 1.00, 0.00 ]
set_color color_num_23,  [ 0.80, 1.00, 0.00 ]
set_color color_num_24,  [ 0.68, 1.00, 0.00 ]
set_color color_num_25,  [ 0.56, 1.00, 0.00 ]
set_color color_num_26,  [ 0.44, 1.00, 0.00 ]
set_color color_num_27,  [ 0.32, 1.00, 0.00 ]
set_color color_num_28,  [ 0.20, 1.00, 0.00 ]
set_color color_num_29,  [ 0.08, 1.00, 0.00 ]
set_color color_num_30,  [ 0.00, 1.00, 0.04 ]
set_color color_num_31,  [ 0.00, 1.00, 0.16 ]
set_color color_num_32,  [ 0.00, 1.00, 0.28 ]
set_color color_num_33,  [ 0.00, 1.00, 0.40 ]
set_color color_num_34,  [ 0.00, 1.00, 0.52 ]
set_color color_num_35,  [ 0.00, 1.00, 0.64 ]
set_color color_num_36,  [ 0.00, 1.00, 0.76 ]
set_color color_num_37,  [ 0.00, 1.00, 0.88 ]
set_color color_num_38,  [ 0.00, 1.00, 1.00 ]
set_color color_num_39,  [ 0.00, 0.88, 1.00 ]
set_color color_num_40,  [ 0.00, 0.76, 1.00 ]
set_color color_num_41,  [ 0.00, 0.64, 1.00 ]
set_color color_num_42,  [ 0.00, 0.52, 1.00 ]
set_color color_num_43,  [ 0.00, 0.40, 1.00 ]
set_color color_num_44,  [ 0.00, 0.28, 1.00 ]
set_color color_num_45,  [ 0.00, 0.16, 1.00 ]
set_color color_num_46,  [ 0.00, 0.04, 1.00 ]
set_color color_num_47,  [ 0.08, 0.00, 1.00 ]
set_color color_num_48,  [ 0.20, 0.00, 1.00 ]
set_color color_num_49,  [ 0.32, 0.00, 1.00 ]
set_color color_num_50,  [ 0.44, 0.00, 1.00 ]
set_color color_num_51,  [ 0.56, 0.00, 1.00 ]
set_color color_num_52,  [ 0.68, 0.00, 1.00 ]
set_color color_num_53,  [ 0.80, 0.00, 1.00 ]
set_color color_num_54,  [ 0.92, 0.00, 1.00 ]
set_color color_num_55,  [ 1.00, 0.00, 0.96 ]
set_color color_num_56,  [ 1.00, 0.00, 0.84 ]
set_color color_num_57,  [ 1.00, 0.00, 0.72 ]
set_color color_num_58,  [ 1.00, 0.00, 0.60 ]
set_color color_num_59,  [ 1.00, 0.00, 0.48 ]
set_color color_num_60,  [ 1.00, 0.00, 0.36 ]
set_color color_num_61,  [ 1.00, 0.00, 0.24 ]
set_color color_num_62,  [ 1.00, 0.00, 0.12 ]

# fixed size radius used for clusters and communities, change them as you please
link_fixed_size_value = 4.0
node_fixed_size_value = 1.0
hub_fixed_size_value  = 1.8

# link size definitions, change them as you please
link_size_value_from_0_to_10   = 2.5
link_size_value_from_10_to_20  = 3.0
link_size_value_from_20_to_30  = 3.5
link_size_value_from_30_to_40  = 4.0
link_size_value_from_40_to_50  = 4.5
link_size_value_from_50_to_60  = 5.0
link_size_value_from_60_to_70  = 5.5
link_size_value_from_70_to_80  = 6.0
link_size_value_from_80_to_90  = 6.5
link_size_value_from_90_to_100 = 7.0

# node size definitions, change them as you please
node_size_value_from_0_to_10   = 0.5
node_size_value_from_10_to_20  = 0.6
node_size_value_from_20_to_30  = 0.7
node_size_value_from_30_to_40  = 0.8
node_size_value_from_40_to_50  = 0.9
node_size_value_from_50_to_60  = 1.0
node_size_value_from_60_to_70  = 1.1
node_size_value_from_70_to_80  = 1.2
node_size_value_from_80_to_90  = 1.3
node_size_value_from_90_to_100 = 1.4

# diff colors definitions, change them as you please
set_color net1_items_color,   [ 1.0, 0.5, 0.0 ]
set_color shared_items_color, [ 0.5, 1.0, 0.0 ]
set_color net2_items_color,   [ 0.8, 0.5, 1.0 ]

# pert colors definitions, change them as you please
set_color color_pert_neg_75_100, [ 0.00, 0.00, 1.00 ]
set_color color_pert_neg_50_75,  [ 0.00, 0.37, 1.00 ]
set_color color_pert_neg_25_50,  [ 0.00, 0.75, 1.00 ]
set_color color_pert_neg_0_25,   [ 0.00, 1.00, 1.00 ]
set_color color_pert_zero,       [ 1.00, 1.00, 1.00 ]
set_color color_pert_pos_75_100, [ 1.00, 0.00, 0.00 ]
set_color color_pert_pos_50_75,  [ 1.00, 0.37, 0.00 ]
set_color color_pert_pos_25_50,  [ 1.00, 0.75, 0.00 ]
set_color color_pert_pos_0_25,   [ 1.00, 1.00, 0.00 ]

# some other graphic settings, change them as you please
cartoon automatic
set cartoon_smooth_loops=0
set cartoon_fancy_helices=1
set transparency_mode=1
set ray_shadows=0
set ray_transparency_shadows=0
set cartoon_transparency=0.6
bg_color white
set ortho=on
set depth_cue=off
set ray_trace_fog=0
set antialias=1
set dash_gap,0.0
set dash_round_ends,on
set dash_width,3.0
set dash_radius,0.0
print("this is 8XWF_comms.pml")



# =========================================== #
# PLEASE DO NOT EDIT ANYTHING BELOW THIS LINE #
# =========================================== #



cmd.load(mol_file_name, "molcart")
dss molcart
hide everything, molcart
color cartoon_color, molcart
show cartoon, molcart

sele notpol, molcart and not polymer
show sticks, notpol
cmd.load(mol_file_name, "psg")
hide everything, psg
# link: L:L:E6 L:L:T5
cmd.dist("link1", "psg and L/L/6/CA", "psg and L/L/5/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link1
# link: L:L:T5 R:R:L296
cmd.dist("link2", "psg and L/L/5/CA", "psg and R/R/296/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link2
# link: L:L:E6 R:R:Y197
cmd.dist("link3", "psg and L/L/6/CA", "psg and R/R/197/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link3
# link: L:L:E6 R:R:R208
cmd.dist("link4", "psg and L/L/6/CA", "psg and R/R/208/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link4
# link: L:L:E6 R:R:R212
cmd.dist("link5", "psg and L/L/6/CA", "psg and R/R/212/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link5
# link: L:L:E6 R:R:D274
cmd.dist("link6", "psg and L/L/6/CA", "psg and R/R/274/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link6
# link: L:L:E6 R:R:R278
cmd.dist("link7", "psg and L/L/6/CA", "psg and R/R/278/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link7
# link: L:L:E6 R:R:L296
cmd.dist("link8", "psg and L/L/6/CA", "psg and R/R/296/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link8
# link: L:L:H34 L:L:L7
cmd.dist("link9", "psg and L/L/34/CA", "psg and L/L/7/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link9
# link: L:L:L7 R:R:V187
cmd.dist("link10", "psg and L/L/7/CA", "psg and R/R/187/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link10
# link: L:L:L7 R:R:S189
cmd.dist("link11", "psg and L/L/7/CA", "psg and R/R/189/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link11
# link: L:L:L7 R:R:Y197
cmd.dist("link12", "psg and L/L/7/CA", "psg and R/R/197/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link12
# link: L:L:R8 R:R:D274
cmd.dist("link13", "psg and L/L/8/CA", "psg and R/R/274/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link13
# link: L:L:R8 R:R:R278
cmd.dist("link14", "psg and L/L/8/CA", "psg and R/R/278/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link14
# link: L:L:R8 R:R:R289
cmd.dist("link15", "psg and L/L/8/CA", "psg and R/R/289/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link15
# link: L:L:R8 R:R:D293
cmd.dist("link16", "psg and L/L/8/CA", "psg and R/R/293/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link16
# link: L:L:Q10 L:L:R29
cmd.dist("link17", "psg and L/L/10/CA", "psg and L/L/29/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link17
# link: L:L:E39 L:L:Q10
cmd.dist("link18", "psg and L/L/39/CA", "psg and L/L/10/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link18
# link: L:L:I18 L:L:I23
cmd.dist("link19", "psg and L/L/18/CA", "psg and L/L/23/CA", label = 0, width = link_fixed_size_value)
color color_num_3, link19
# link: L:L:I18 L:L:L44
cmd.dist("link20", "psg and L/L/18/CA", "psg and L/L/44/CA", label = 0, width = link_fixed_size_value)
color color_num_3, link20
# link: L:L:I18 L:L:L52
cmd.dist("link21", "psg and L/L/18/CA", "psg and L/L/52/CA", label = 0, width = link_fixed_size_value)
color color_num_3, link21
# link: L:L:I23 L:L:L44
cmd.dist("link22", "psg and L/L/23/CA", "psg and L/L/44/CA", label = 0, width = link_fixed_size_value)
color color_num_3, link22
# link: L:L:H34 L:L:R29
cmd.dist("link23", "psg and L/L/34/CA", "psg and L/L/29/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link23
# link: L:L:E39 L:L:R29
cmd.dist("link24", "psg and L/L/39/CA", "psg and L/L/29/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link24
# link: L:L:H34 L:L:P33
cmd.dist("link25", "psg and L/L/34/CA", "psg and L/L/33/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link25
# link: L:L:P33 R:R:R185
cmd.dist("link26", "psg and L/L/33/CA", "psg and R/R/185/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link26
# link: L:L:P33 R:R:V187
cmd.dist("link27", "psg and L/L/33/CA", "psg and R/R/187/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link27
# link: L:L:P33 R:R:D199
cmd.dist("link28", "psg and L/L/33/CA", "psg and R/R/199/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link28
# link: L:L:H34 R:R:V187
cmd.dist("link29", "psg and L/L/34/CA", "psg and R/R/187/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link29
# link: L:L:H34 R:R:S189
cmd.dist("link30", "psg and L/L/34/CA", "psg and R/R/189/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link30
# link: L:L:L52 L:L:V40
cmd.dist("link31", "psg and L/L/52/CA", "psg and L/L/40/CA", label = 0, width = link_fixed_size_value)
color color_num_3, link31
# link: L:L:V40 L:L:V59
cmd.dist("link32", "psg and L/L/40/CA", "psg and L/L/59/CA", label = 0, width = link_fixed_size_value)
color color_num_3, link32
# link: L:L:L52 L:L:V59
cmd.dist("link33", "psg and L/L/52/CA", "psg and L/L/59/CA", label = 0, width = link_fixed_size_value)
color color_num_3, link33
# link: N:N:L52 N:N:V40
cmd.dist("link34", "psg and N/N/52/CA", "psg and N/N/40/CA", label = 0, width = link_fixed_size_value)
color color_num_5, link34
# link: N:N:V40 N:N:V59
cmd.dist("link35", "psg and N/N/40/CA", "psg and N/N/59/CA", label = 0, width = link_fixed_size_value)
color color_num_5, link35
# link: N:N:L52 N:N:V59
cmd.dist("link36", "psg and N/N/52/CA", "psg and N/N/59/CA", label = 0, width = link_fixed_size_value)
color color_num_5, link36
# link: R:R:L71 R:R:Y75
cmd.dist("link37", "psg and R/R/71/CA", "psg and R/R/75/CA", label = 0, width = link_fixed_size_value)
color color_num_6, link37
# link: R:R:I328 R:R:L71
cmd.dist("link38", "psg and R/R/328/CA", "psg and R/R/71/CA", label = 0, width = link_fixed_size_value)
color color_num_6, link38
# link: R:R:I328 R:R:Y75
cmd.dist("link39", "psg and R/R/328/CA", "psg and R/R/75/CA", label = 0, width = link_fixed_size_value)
color color_num_6, link39
# link: R:R:D143 R:R:V82
cmd.dist("link40", "psg and R/R/143/CA", "psg and R/R/82/CA", label = 0, width = link_fixed_size_value)
color color_num_8, link40
# link: R:R:R159 R:R:V82
cmd.dist("link41", "psg and R/R/159/CA", "psg and R/R/82/CA", label = 0, width = link_fixed_size_value)
color color_num_8, link41
# link: R:R:A315 R:R:L87
cmd.dist("link42", "psg and R/R/315/CA", "psg and R/R/87/CA", label = 0, width = link_fixed_size_value)
color color_num_7, link42
# link: R:R:F321 R:R:L87
cmd.dist("link43", "psg and R/R/321/CA", "psg and R/R/87/CA", label = 0, width = link_fixed_size_value)
color color_num_7, link43
# link: R:R:D94 R:R:L90
cmd.dist("link44", "psg and R/R/94/CA", "psg and R/R/90/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link44
# link: R:R:L136 R:R:L90
cmd.dist("link45", "psg and R/R/136/CA", "psg and R/R/90/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link45
# link: R:R:L90 R:R:N310
cmd.dist("link46", "psg and R/R/90/CA", "psg and R/R/310/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link46
# link: R:R:D94 R:R:N310
cmd.dist("link47", "psg and R/R/94/CA", "psg and R/R/310/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link47
# link: R:R:I103 R:R:W112
cmd.dist("link48", "psg and R/R/103/CA", "psg and R/R/112/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link48
# link: R:R:I103 R:R:V122
cmd.dist("link49", "psg and R/R/103/CA", "psg and R/R/122/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link49
# link: R:R:C119 R:R:W112
cmd.dist("link50", "psg and R/R/119/CA", "psg and R/R/112/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link50
# link: R:R:V122 R:R:W112
cmd.dist("link51", "psg and R/R/122/CA", "psg and R/R/112/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link51
# link: R:R:C196 R:R:W112
cmd.dist("link52", "psg and R/R/196/CA", "psg and R/R/112/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link52
# link: R:R:C119 R:R:R184
cmd.dist("link53", "psg and R/R/119/CA", "psg and R/R/184/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link53
# link: R:R:C119 R:R:C196
cmd.dist("link54", "psg and R/R/119/CA", "psg and R/R/196/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link54
# link: R:R:S123 R:R:V180
cmd.dist("link55", "psg and R/R/123/CA", "psg and R/R/180/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link55
# link: R:R:R184 R:R:S123
cmd.dist("link56", "psg and R/R/184/CA", "psg and R/R/123/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link56
# link: R:R:E127 R:R:F130
cmd.dist("link57", "psg and R/R/127/CA", "psg and R/R/130/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link57
# link: R:R:E127 R:R:Y131
cmd.dist("link58", "psg and R/R/127/CA", "psg and R/R/131/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link58
# link: R:R:E127 R:R:V180
cmd.dist("link59", "psg and R/R/127/CA", "psg and R/R/180/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link59
# link: R:R:F130 R:R:Y131
cmd.dist("link60", "psg and R/R/130/CA", "psg and R/R/131/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link60
# link: R:R:F130 R:R:I134
cmd.dist("link61", "psg and R/R/130/CA", "psg and R/R/134/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link61
# link: R:R:F130 R:R:W264
cmd.dist("link62", "psg and R/R/130/CA", "psg and R/R/264/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link62
# link: R:R:I134 R:R:W264
cmd.dist("link63", "psg and R/R/134/CA", "psg and R/R/264/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link63
# link: R:R:I140 R:R:R144
cmd.dist("link64", "psg and R/R/140/CA", "psg and R/R/144/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link64
# link: R:R:I140 R:R:Y314
cmd.dist("link65", "psg and R/R/140/CA", "psg and R/R/314/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link65
# link: R:R:M227 R:R:S141
cmd.dist("link66", "psg and R/R/227/CA", "psg and R/R/141/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link66
# link: R:R:S141 R:R:Y231
cmd.dist("link67", "psg and R/R/141/CA", "psg and R/R/231/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link67
# link: R:R:D143 R:R:R159
cmd.dist("link68", "psg and R/R/143/CA", "psg and R/R/159/CA", label = 0, width = link_fixed_size_value)
color color_num_8, link68
# link: R:R:R144 R:R:Y231
cmd.dist("link69", "psg and R/R/144/CA", "psg and R/R/231/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link69
# link: R:R:R144 R:R:Y314
cmd.dist("link70", "psg and R/R/144/CA", "psg and R/R/314/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link70
# link: R:R:V149 R:R:Y145
cmd.dist("link71", "psg and R/R/149/CA", "psg and R/R/145/CA", label = 0, width = link_fixed_size_value)
color color_num_4, link71
# link: R:R:H150 R:R:Y145
cmd.dist("link72", "psg and R/R/150/CA", "psg and R/R/145/CA", label = 0, width = link_fixed_size_value)
color color_num_4, link72
# link: R:R:I148 R:R:T234
cmd.dist("link73", "psg and R/R/148/CA", "psg and R/R/234/CA", label = 0, width = link_fixed_size_value)
color color_num_4, link73
# link: R:R:I148 R:R:L238
cmd.dist("link74", "psg and R/R/148/CA", "psg and R/R/238/CA", label = 0, width = link_fixed_size_value)
color color_num_4, link74
# link: R:R:H150 R:R:V149
cmd.dist("link75", "psg and R/R/150/CA", "psg and R/R/149/CA", label = 0, width = link_fixed_size_value)
color color_num_4, link75
# link: R:R:R184 R:R:V180
cmd.dist("link76", "psg and R/R/184/CA", "psg and R/R/180/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link76
# link: R:R:C196 R:R:R184
cmd.dist("link77", "psg and R/R/196/CA", "psg and R/R/184/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link77
# link: R:R:E198 R:R:R184
cmd.dist("link78", "psg and R/R/198/CA", "psg and R/R/184/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link78
# link: R:R:R185 R:R:V187
cmd.dist("link79", "psg and R/R/185/CA", "psg and R/R/187/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link79
# link: R:R:D199 R:R:R185
cmd.dist("link80", "psg and R/R/199/CA", "psg and R/R/185/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link80
# link: R:R:V187 R:R:Y197
cmd.dist("link81", "psg and R/R/187/CA", "psg and R/R/197/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link81
# link: R:R:E198 R:R:Y197
cmd.dist("link82", "psg and R/R/198/CA", "psg and R/R/197/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link82
# link: R:R:R208 R:R:Y197
cmd.dist("link83", "psg and R/R/208/CA", "psg and R/R/197/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link83
# link: R:R:E198 R:R:M200
cmd.dist("link84", "psg and R/R/198/CA", "psg and R/R/200/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link84
# link: R:R:E198 R:R:R208
cmd.dist("link85", "psg and R/R/198/CA", "psg and R/R/208/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link85
# link: R:R:M200 R:R:R208
cmd.dist("link86", "psg and R/R/200/CA", "psg and R/R/208/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link86
# link: R:R:R208 R:R:R212
cmd.dist("link87", "psg and R/R/208/CA", "psg and R/R/212/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link87
# link: R:R:D274 R:R:R212
cmd.dist("link88", "psg and R/R/274/CA", "psg and R/R/212/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link88
# link: R:R:M227 R:R:Y231
cmd.dist("link89", "psg and R/R/227/CA", "psg and R/R/231/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link89
# link: R:R:L238 R:R:T234
cmd.dist("link90", "psg and R/R/238/CA", "psg and R/R/234/CA", label = 0, width = link_fixed_size_value)
color color_num_4, link90
# link: R:R:I313 R:R:V256
cmd.dist("link91", "psg and R/R/313/CA", "psg and R/R/256/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link91
# link: R:R:V256 R:R:Y314
cmd.dist("link92", "psg and R/R/256/CA", "psg and R/R/314/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link92
# link: R:R:D274 R:R:R278
cmd.dist("link93", "psg and R/R/274/CA", "psg and R/R/278/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link93
# link: R:R:D293 R:R:R289
cmd.dist("link94", "psg and R/R/293/CA", "psg and R/R/289/CA", label = 0, width = link_fixed_size_value)
color color_num_1, link94
# link: R:R:N310 R:R:Y314
cmd.dist("link95", "psg and R/R/310/CA", "psg and R/R/314/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link95
# link: R:R:I313 R:R:Y314
cmd.dist("link96", "psg and R/R/313/CA", "psg and R/R/314/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link96
# link: R:R:A315 R:R:F321
cmd.dist("link97", "psg and R/R/315/CA", "psg and R/R/321/CA", label = 0, width = link_fixed_size_value)
color color_num_7, link97
# link: R:R:G133 R:R:L90
cmd.dist("link98", "psg and R/R/133/CA", "psg and R/R/90/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link98
# link: R:R:G133 R:R:L136
cmd.dist("link99", "psg and R/R/133/CA", "psg and R/R/136/CA", label = 0, width = link_fixed_size_value)
color color_num_2, link99
# link: R:R:T234 R:R:V149
cmd.dist("link100", "psg and R/R/234/CA", "psg and R/R/149/CA", label = 0, width = link_fixed_size_value)
color color_num_4, link100
# node: L:L:E6
sele node1, psg and L/L/6/CA
color color_num_1, node1
alter node1, vdw = hub_fixed_size_value
show sphere, node1

# node: L:L:T5
sele node2, psg and L/L/5/CA
color color_num_1, node2
alter node2, vdw = node_fixed_size_value
show sphere, node2

# node: R:R:L296
sele node3, psg and R/R/296/CA
color color_num_1, node3
alter node3, vdw = hub_fixed_size_value
show sphere, node3

# node: R:R:Y197
sele node4, psg and R/R/197/CA
color color_num_1, node4
alter node4, vdw = hub_fixed_size_value
show sphere, node4

# node: R:R:R208
sele node5, psg and R/R/208/CA
color color_num_1, node5
alter node5, vdw = hub_fixed_size_value
show sphere, node5

# node: R:R:R212
sele node6, psg and R/R/212/CA
color color_num_1, node6
alter node6, vdw = hub_fixed_size_value
show sphere, node6

# node: R:R:D274
sele node7, psg and R/R/274/CA
color color_num_1, node7
alter node7, vdw = hub_fixed_size_value
show sphere, node7

# node: R:R:R278
sele node8, psg and R/R/278/CA
color color_num_1, node8
alter node8, vdw = hub_fixed_size_value
show sphere, node8

# node: L:L:H34
sele node9, psg and L/L/34/CA
color color_num_1, node9
alter node9, vdw = hub_fixed_size_value
show sphere, node9

# node: L:L:L7
sele node10, psg and L/L/7/CA
color color_num_1, node10
alter node10, vdw = hub_fixed_size_value
show sphere, node10

# node: R:R:V187
sele node11, psg and R/R/187/CA
color color_num_1, node11
alter node11, vdw = hub_fixed_size_value
show sphere, node11

# node: R:R:S189
sele node12, psg and R/R/189/CA
color color_num_1, node12
alter node12, vdw = node_fixed_size_value
show sphere, node12

# node: L:L:R8
sele node13, psg and L/L/8/CA
color color_num_1, node13
alter node13, vdw = hub_fixed_size_value
show sphere, node13

# node: R:R:R289
sele node14, psg and R/R/289/CA
color color_num_1, node14
alter node14, vdw = node_fixed_size_value
show sphere, node14

# node: R:R:D293
sele node15, psg and R/R/293/CA
color color_num_1, node15
alter node15, vdw = node_fixed_size_value
show sphere, node15

# node: L:L:Q10
sele node16, psg and L/L/10/CA
color color_num_1, node16
alter node16, vdw = hub_fixed_size_value
show sphere, node16

# node: L:L:R29
sele node17, psg and L/L/29/CA
color color_num_1, node17
alter node17, vdw = hub_fixed_size_value
show sphere, node17

# node: L:L:E39
sele node18, psg and L/L/39/CA
color color_num_1, node18
alter node18, vdw = hub_fixed_size_value
show sphere, node18

# node: L:L:I18
sele node19, psg and L/L/18/CA
color color_num_3, node19
alter node19, vdw = node_fixed_size_value
show sphere, node19

# node: L:L:I23
sele node20, psg and L/L/23/CA
color color_num_3, node20
alter node20, vdw = node_fixed_size_value
show sphere, node20

# node: L:L:L44
sele node21, psg and L/L/44/CA
color color_num_3, node21
alter node21, vdw = hub_fixed_size_value
show sphere, node21

# node: L:L:L52
sele node22, psg and L/L/52/CA
color color_num_3, node22
alter node22, vdw = node_fixed_size_value
show sphere, node22

# node: L:L:P33
sele node23, psg and L/L/33/CA
color color_num_1, node23
alter node23, vdw = hub_fixed_size_value
show sphere, node23

# node: R:R:R185
sele node24, psg and R/R/185/CA
color color_num_1, node24
alter node24, vdw = node_fixed_size_value
show sphere, node24

# node: R:R:D199
sele node25, psg and R/R/199/CA
color color_num_1, node25
alter node25, vdw = node_fixed_size_value
show sphere, node25

# node: L:L:V40
sele node26, psg and L/L/40/CA
color color_num_3, node26
alter node26, vdw = node_fixed_size_value
show sphere, node26

# node: L:L:V59
sele node27, psg and L/L/59/CA
color color_num_3, node27
alter node27, vdw = hub_fixed_size_value
show sphere, node27

# node: N:N:L52
sele node28, psg and N/N/52/CA
color color_num_5, node28
alter node28, vdw = hub_fixed_size_value
show sphere, node28

# node: N:N:V40
sele node29, psg and N/N/40/CA
color color_num_5, node29
alter node29, vdw = node_fixed_size_value
show sphere, node29

# node: N:N:V59
sele node30, psg and N/N/59/CA
color color_num_5, node30
alter node30, vdw = node_fixed_size_value
show sphere, node30

# node: R:R:L71
sele node31, psg and R/R/71/CA
color color_num_6, node31
alter node31, vdw = node_fixed_size_value
show sphere, node31

# node: R:R:Y75
sele node32, psg and R/R/75/CA
color color_num_6, node32
alter node32, vdw = node_fixed_size_value
show sphere, node32

# node: R:R:I328
sele node33, psg and R/R/328/CA
color color_num_6, node33
alter node33, vdw = node_fixed_size_value
show sphere, node33

# node: R:R:D143
sele node34, psg and R/R/143/CA
color color_num_8, node34
alter node34, vdw = node_fixed_size_value
show sphere, node34

# node: R:R:V82
sele node35, psg and R/R/82/CA
color color_num_8, node35
alter node35, vdw = node_fixed_size_value
show sphere, node35

# node: R:R:R159
sele node36, psg and R/R/159/CA
color color_num_8, node36
alter node36, vdw = hub_fixed_size_value
show sphere, node36

# node: R:R:A315
sele node37, psg and R/R/315/CA
color color_num_7, node37
alter node37, vdw = node_fixed_size_value
show sphere, node37

# node: R:R:L87
sele node38, psg and R/R/87/CA
color color_num_7, node38
alter node38, vdw = node_fixed_size_value
show sphere, node38

# node: R:R:F321
sele node39, psg and R/R/321/CA
color color_num_7, node39
alter node39, vdw = hub_fixed_size_value
show sphere, node39

# node: R:R:D94
sele node40, psg and R/R/94/CA
color color_num_2, node40
alter node40, vdw = hub_fixed_size_value
show sphere, node40

# node: R:R:L90
sele node41, psg and R/R/90/CA
color color_num_2, node41
alter node41, vdw = hub_fixed_size_value
show sphere, node41

# node: R:R:L136
sele node42, psg and R/R/136/CA
color color_num_2, node42
alter node42, vdw = node_fixed_size_value
show sphere, node42

# node: R:R:N310
sele node43, psg and R/R/310/CA
color color_num_2, node43
alter node43, vdw = node_fixed_size_value
show sphere, node43

# node: R:R:I103
sele node44, psg and R/R/103/CA
color color_num_1, node44
alter node44, vdw = node_fixed_size_value
show sphere, node44

# node: R:R:W112
sele node45, psg and R/R/112/CA
color color_num_1, node45
alter node45, vdw = hub_fixed_size_value
show sphere, node45

# node: R:R:V122
sele node46, psg and R/R/122/CA
color color_num_1, node46
alter node46, vdw = node_fixed_size_value
show sphere, node46

# node: R:R:C119
sele node47, psg and R/R/119/CA
color color_num_1, node47
alter node47, vdw = node_fixed_size_value
show sphere, node47

# node: R:R:C196
sele node48, psg and R/R/196/CA
color color_num_1, node48
alter node48, vdw = node_fixed_size_value
show sphere, node48

# node: R:R:R184
sele node49, psg and R/R/184/CA
color color_num_1, node49
alter node49, vdw = hub_fixed_size_value
show sphere, node49

# node: R:R:S123
sele node50, psg and R/R/123/CA
color color_num_1, node50
alter node50, vdw = node_fixed_size_value
show sphere, node50

# node: R:R:V180
sele node51, psg and R/R/180/CA
color color_num_1, node51
alter node51, vdw = node_fixed_size_value
show sphere, node51

# node: R:R:E127
sele node52, psg and R/R/127/CA
color color_num_1, node52
alter node52, vdw = node_fixed_size_value
show sphere, node52

# node: R:R:F130
sele node53, psg and R/R/130/CA
color color_num_1, node53
alter node53, vdw = hub_fixed_size_value
show sphere, node53

# node: R:R:Y131
sele node54, psg and R/R/131/CA
color color_num_1, node54
alter node54, vdw = hub_fixed_size_value
show sphere, node54

# node: R:R:I134
sele node55, psg and R/R/134/CA
color color_num_1, node55
alter node55, vdw = node_fixed_size_value
show sphere, node55

# node: R:R:W264
sele node56, psg and R/R/264/CA
color color_num_1, node56
alter node56, vdw = hub_fixed_size_value
show sphere, node56

# node: R:R:I140
sele node57, psg and R/R/140/CA
color color_num_2, node57
alter node57, vdw = node_fixed_size_value
show sphere, node57

# node: R:R:R144
sele node58, psg and R/R/144/CA
color color_num_2, node58
alter node58, vdw = node_fixed_size_value
show sphere, node58

# node: R:R:Y314
sele node59, psg and R/R/314/CA
color color_num_2, node59
alter node59, vdw = hub_fixed_size_value
show sphere, node59

# node: R:R:M227
sele node60, psg and R/R/227/CA
color color_num_2, node60
alter node60, vdw = node_fixed_size_value
show sphere, node60

# node: R:R:S141
sele node61, psg and R/R/141/CA
color color_num_2, node61
alter node61, vdw = node_fixed_size_value
show sphere, node61

# node: R:R:Y231
sele node62, psg and R/R/231/CA
color color_num_2, node62
alter node62, vdw = hub_fixed_size_value
show sphere, node62

# node: R:R:V149
sele node63, psg and R/R/149/CA
color color_num_4, node63
alter node63, vdw = hub_fixed_size_value
show sphere, node63

# node: R:R:Y145
sele node64, psg and R/R/145/CA
color color_num_4, node64
alter node64, vdw = hub_fixed_size_value
show sphere, node64

# node: R:R:H150
sele node65, psg and R/R/150/CA
color color_num_4, node65
alter node65, vdw = node_fixed_size_value
show sphere, node65

# node: R:R:I148
sele node66, psg and R/R/148/CA
color color_num_4, node66
alter node66, vdw = node_fixed_size_value
show sphere, node66

# node: R:R:T234
sele node67, psg and R/R/234/CA
color color_num_4, node67
alter node67, vdw = node_fixed_size_value
show sphere, node67

# node: R:R:L238
sele node68, psg and R/R/238/CA
color color_num_4, node68
alter node68, vdw = node_fixed_size_value
show sphere, node68

# node: R:R:E198
sele node69, psg and R/R/198/CA
color color_num_1, node69
alter node69, vdw = hub_fixed_size_value
show sphere, node69

# node: R:R:M200
sele node70, psg and R/R/200/CA
color color_num_1, node70
alter node70, vdw = hub_fixed_size_value
show sphere, node70

# node: R:R:I313
sele node71, psg and R/R/313/CA
color color_num_2, node71
alter node71, vdw = node_fixed_size_value
show sphere, node71

# node: R:R:V256
sele node72, psg and R/R/256/CA
color color_num_2, node72
alter node72, vdw = node_fixed_size_value
show sphere, node72

# node: R:R:G133
sele node73, psg and R/R/133/CA
color color_num_2, node73
alter node73, vdw = node_fixed_size_value
show sphere, node73

