Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

All columns can be sorted in ascending/descending alphabetical order, clicking on the corresponding column header.

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg. Int. Strength Num. Of Links Community ConSurf
1NT 13.0609819
21x27 2.46405
31x39 5.1395508
42x42 4.4775457
52x44 4.73917406
62x50 7.26479409
72x53 5.66812407
82x64 5.04771405
9E1x50 6.76681628
10E1x52 6.577527
113x30 4.46767516
123x37 5.1805507
133x42 8.76687438
143x51 6.97771408
153x56 5.75604406
16I2x52 4.80813405
174x50 5.26167439
18E2 7.690441514
195x47 7.09278618
205x51 4.00958416
215x58 4.21625409
22I3 3.65417604
236x36 4.06292408
246x44 6.06183519
256x48 7.266518
266x51 4.87458417
276x52 6.515518
286x55 6.1325616
29E3 4.94736611
307x28 3.04813412
317x34 7.6315515
327x49 6.00125409
337x53 4.91514609
347x54 4.64012706
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

All columns can be sorted in ascending/descending alphabetical order, clicking on the corresponding column header.

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
11x27 7x28 17.22172.8525YesYes052
27x28 NT 22.75744.23417YesYes129
3E2 NT 34.496827.2083YesYes149
46x55 E2 45.45925.88833YesYes164
56x51 6x55 23.35765.4025YesYes176
66x51 7x41 47.73063.93583YesNo078
76x48 7x41 47.81493.87083YesNo088
86x48 7x45 10011.1758YesNo089
97x45 7x49 99.46146.655NoYes099
102x50 7x49 52.52227.81167YesYes099
112x50 7x46 45.82519.32417YesNo099
122x53 7x46 45.06044.59833YesNo079
132x53 7x42 26.33828.82YesNo077
141x39 7x42 14.7945.65167YesNo087
157x34 E2 21.90226.86833YesYes154
166x51 7x34 24.68555.1275YesYes175
176x52 6x55 27.31054.2325YesYes186
185x47 6x52 53.722714.5067YesYes188
195x47 6x48 51.90763.93083YesYes188
205x44 E2 24.12024.28667NoYes164
215x44 6x52 24.49434.99333NoYes168
221x42 7x42 11.46814.56583NoNo077
237x49 7x53 73.04724.52917YesYes099
242x43 7x53 60.47323.51833NoYes089
252x43 7x54 60.15053.7125NoYes086
261x57 7x54 52.191210.2325NoYes076
271x57 2x40 48.21162.94667NoNo077
282x37 2x40 47.49635.35583NoNo077
292x37 I2x52 46.73987.23NoYes075
303x53 I2x52 22.10575.01NoYes085
313x49 3x53 18.01925.36083NoNo088
322x42 3x49 16.22682.88583YesNo078
332x53 3x32 18.7865.22583YesNo077
342x56 3x32 17.88565.565NoNo067
352x56 3x28 16.07265.0075NoNo064
362x59 3x28 15.15999.89167NoNo074
374x61 E2 15.13945.0225NoYes144
383x30 4x61 13.71486.79YesNo164
393x52 I2x52 25.72773.4875NoYes055
403x52 3x56 24.86843.8225NoYes056
413x55 3x56 19.626710.7117NoYes076
423x51 3x55 18.73877.5575YesNo087
433x51 5x61 10.56163.22667YesNo088
446x62 E2 17.25055.01583NoYes134
455x33 6x62 11.17415.045NoNo013
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


Consensus Members
Id Members
succinate_on 8YKW-Succinate-Succinic acid-Gi1/β1/γ1
8YKX-Succinate-Maleic acid-Gi1/β1/γ1
hca_on hca2_on
Net Summary
Imin 3.69
Number of Linked Nodes 277
Number of Links 301
Number of Hubs 34
Number of Links mediated by Hubs 148
Number of Communities 5
Number of Nodes involved in Communities 40
Number of Links involved in Communities 56
Path Summary
Number Of Nodes in MetaPath 46
Number Of Links MetaPath 45
Number of Shortest Paths 71637
Length Of Smallest Path 3
Average Path Length 15.5398
Length of Longest Path 31
Minimum Path Strength 0.7325
Average Path Strength 6.04686
Maximum Path Strength 15.2578
Minimum Path Correlation 0.7
Average Path Correlation 0.904841
Maximum Path Correlation 0.986667
Minimum % Of Corr. Nodes 3.44828
Average % Of Corr. Nodes 34.9609
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 47.269
Maximum Path Hubs % 100

Details about the values in these tables can be found in the corresponding documentation page .

This network is also present in following differences:
Id1st Network2nd Network
alicarboxylic_off_onalicarboxylic_offalicarboxylic_on
This network is also present in following consensuses:
IdComponents
class-a_onsensory_on
alicarboxylic_on
amine_on
lipid_on
nucleotide_on
peptide_on
protein_on



You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download alicarboxylic_on.zip



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