Orange: nodes, hubs and links specific of 5ht2b_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of 5ht2b_on network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner 5ht2b_off Avg Int. Strength 5ht2b_on Avg Int. Strength 5ht2b_off Num Of Links 5ht2b_on Num Of Links ConSurf
11x60 5ht2b_off7.97754.38427
2I1x48 5ht2b_off5.2054.07417
3I1x50 5ht2b_off7.512510.255428
42x40 5ht2b_off5.987.97539
52x41 5ht2b_off5.5565.65333535
62x42 5ht2b_off4.313334.05638
72x51 5ht2b_off4.914.22333437
83x25 5ht2b_off5.1525.42333539
93x28 5ht2b_off7.76255.95667436
103x34 5ht2b_off4.0023.16667536
113x51 5ht2b_off6.3454.86438
124x59 5ht2b_off4.53253.275424
13E2.N204 5ht2b_off2.817.06433
145x36 5ht2b_off7.70758.23425
155x39 5ht2b_off4.933.26667537
165x50 5ht2b_off5.46755.58333439
175x54 5ht2b_off5.44755.76667438
186x37 5ht2b_off5.95753.165428
196x41 5ht2b_off6.334.445728
206x44 5ht2b_off6.756675.23333639
216x48 5ht2b_off7.136.49738
227x37 5ht2b_off5.674.905425
237x50 5ht2b_off5.6856.525429
247x54 5ht2b_off6.14255.59667437
258x54 5ht2b_off4.924.43527
268x57 5ht2b_off4.211.03515
27Lig Shared8.244559.135711170
281x50 Shared4.67255.9449
292x50 Shared5.82256.182459
302x57 Shared3.855714.128758
31E1x50 Shared7.352865.45833767
32E1x52 Shared6.313.5375446
333x32 Shared8.12758.93448
343x35 Shared6.7045.2425546
353x42 Shared7.7125.955568
364x50 Shared4.668574.082759
37E2.N201 Shared2.774.52442
38E2.K211 Shared5.48253.1025445
395x47 Shared10.54256.99468
406x51 Shared7.847.3475647
416x52 Shared11.9088.89547
427x39 Shared7.427144.596757
437x42 Shared4.9145.818558
448x50 Shared8.2887.024559
454x39 5ht2b_on3.974.555344
46E2.R213 5ht2b_on7.146675.875343
475x58 5ht2b_on8.877.4625249
487x53 5ht2b_on5.065.765249
498x58 5ht2b_on2.633334.25346
   
Orange: nodes, hubs and links specific of 5ht2b_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of 5ht2b_on network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner 5ht2b_off Recurrence 5ht2b_on Recurrence 5ht2b_off Hub1? 5ht2b_on Hub1? 5ht2b_off Hub2? 5ht2b_on Hub2? ConSurf1 ConSurf2
13x33 Lig 5ht2b_off36.69773.05124NoNoYesYes70
23x37 Lig 5ht2b_off16.97350NoNoYesYes70
3E2x52 Lig 5ht2b_off13.27660NoNoYesYes50
46x52 Lig 5ht2b_off45.99870YesYesYesYes70
52x66 E1x51 5ht2b_off14.91230NoNoNoNo33
6E1x50 E1x51 5ht2b_off38.60492.41531YesYesNoNo73
72x60 3x28 5ht2b_off75.71330NoNoYesNo76
82x60 7x39 5ht2b_off77.52511.52868NoNoYesYes77
97x39 7x42 5ht2b_off10.12259.13538YesYesYesYes78
101x35 1x38 5ht2b_off10.00510NoNoNoNo45
111x38 1x411 5ht2b_off13.31330NoNoNoNo54
121x411 1x42 5ht2b_off19.88560NoNoNoNo47
131x42 2x57 5ht2b_off26.39923.35698NoNoYesYes78
142x57 7x42 5ht2b_off21.22069.71628YesYesYesYes88
152x61 7x39 5ht2b_off10.11520NoNoYesYes67
162x50 3x39 5ht2b_off13.14461.56537YesYesNoNo99
173x39 7x46 5ht2b_off14.02480NoNoNoNo99
186x48 7x46 5ht2b_off14.01010YesNoNoNo89
196x48 6x51 5ht2b_off87.37620YesNoYesYes87
207x49 7x50 5ht2b_off18.46990NoNoYesNo99
216x44 7x49 5ht2b_off15.49180YesNoNoNo99
226x44 6x48 5ht2b_off1000YesNoYesNo98
236x48 6x52 5ht2b_off30.30881.19237YesNoYesYes87
241x50 2x51 5ht2b_off23.17178.0225YesYesYesNo97
257x51 8x54 5ht2b_off16.87820NoNoYesNo67
268x50 8x54 5ht2b_off45.8740YesYesYesNo97
271x57 2x40 5ht2b_off81.34670NoNoYesNo89
281x57 2x44 5ht2b_off83.27594.66553NoNoNoNo87
292x41 2x44 5ht2b_off85.19040YesNoNoNo57
302x41 4x46 5ht2b_off98.12950YesNoNoNo57
312x45 4x46 5ht2b_off56.44390.593127NoNoNoNo97
322x45 4x50 5ht2b_off48.85210.953895NoNoYesYes99
333x35 4x50 5ht2b_off39.52910YesYesYesYes69
342x53 3x35 5ht2b_off49.60026.37153NoNoYesYes76
352x53 2x56 5ht2b_off10.62860NoNoNoNo77
361x52 8x54 5ht2b_off26.22319.23933NoNoYesNo77
371x52 8x57 5ht2b_off14.57490NoNoYesNo75
382x48 2x52 5ht2b_off12.18370NoNoNoNo67
392x52 3x35 5ht2b_off16.2184.85508NoNoYesYes76
401x60 I1x50 5ht2b_off14.51620YesNoYesNo78
412x40 I1x50 5ht2b_off17.74370YesNoYesNo98
422x42 3x42 5ht2b_off22.9155.96184YesNoYesYes88
433x42 4x50 5ht2b_off20.91981.77327YesYesYesYes89
443x43 6x44 5ht2b_off60.08220NoNoYesNo99
453x43 6x41 5ht2b_off63.46370NoNoYesNo98
463x46 6x41 5ht2b_off48.77870NoNoYesNo98
472x42 3x46 5ht2b_off48.34590YesNoNoNo89
482x59 3x28 5ht2b_off13.81212.47034NoNoYesNo56
492x59 E1x52 5ht2b_off11.54550NoNoYesYes56
50E1x49 E1x51 5ht2b_off22.17410NoNoNoNo33
513x25 E1x50 5ht2b_off14.86834.92234YesNoYesYes97
523x24 E1x52 5ht2b_off14.42820NoNoYesYes56
534x60 5x39 5ht2b_off10.39390NoNoYesNo87
543x33 4x57 5ht2b_off34.65121.52868NoNoNoNo78
553x34 4x57 5ht2b_off33.74170YesNoNoNo68
566x44 6x45 5ht2b_off32.78080YesNoNoNo95
575x54 6x45 5ht2b_off26.41380YesNoNoNo85
583x44 5x54 5ht2b_off21.97617.55778NoNoYesNo78
593x44 5x50 5ht2b_off17.19360NoNoYesNo79
603x47 5x57 5ht2b_off11.63351.55925NoNoNoNo96
616x37 6x41 5ht2b_off44.61230YesNoYesNo88
623x50 3x54 5ht2b_off35.86150NoNoNoNo99
635x61 5x65 5ht2b_off21.91010NoNoNoNo98
645x36 E2x52 5ht2b_off10.28398.9764YesNoNoNo55
655x36 5x39 5ht2b_off11.50150YesNoYesNo57
665x36 E2.R213 5ht2b_off10.48197.50275YesNoNoYes53
67E1x49 E2.N204 5ht2b_off19.76824.56157NoNoYesNo33
68E2.N201 E2.N204 5ht2b_off12.42570YesYesYesNo23
696x51 6x55 5ht2b_off28.4750YesYesNoNo76
705x40 6x55 5ht2b_off24.41877.54555NoNoNoNo66
715x40 E2.K211 5ht2b_off13.92940NoNoYesYes65
725x44 6x52 5ht2b_off14.67763.11239NoNoYesYes77
735x44 6x56 5ht2b_off12.37441.55925NoNoNoNo76
745x47 5x48 5ht2b_off10.93.11239YesYesNoNo86
755x51 6x45 5ht2b_off15.35251.55314NoNoNoNo65
765x51 5x55 5ht2b_off12.82920NoNoNoNo65
775x55 5x59 5ht2b_off10.29121.55925NoNoNoNo53
786x51 7x34 5ht2b_off46.0066.18197YesYesNoNo75
796x54 7x34 5ht2b_off27.57284.6533NoNoNoNo55
806x54 7x37 5ht2b_off11.20083.11239NoNoYesNo55
816x54 7x30 5ht2b_off13.96610NoNoNoNo54
827x31 7x34 5ht2b_off16.71680NoNoNoNo25
837x31 7x35 5ht2b_off13.96610NoNoNoNo25
847x32 7x35 5ht2b_off11.20080NoNoNoNo25
856x40 6x41 5ht2b_off10.05650NoNoYesNo88
863x28 3x29 5ht2b_off10.9660YesNoNoNo65
877x38 7x39 5ht2b_off59.97950NoNoYesYes67
887x42 Lig 5ht2b_off36.16230YesYesYesYes80
893x34 4x50 5ht2b_off29.8540YesNoYesYes69
902x53 2x57 5ht2b_off41.09150NoNoYesYes78
912x46 7x50 5ht2b_off12.90250NoNoYesNo99
922x57 7x39 5ht2b_off37.9960.214015YesYesYesYes87
932x42 4x46 5ht2b_off44.28230YesNoNoNo87
945x47 6x48 5ht2b_off10.89271.9139YesYesYesNo88
955x39 Lig Shared40.343338.9079YesNoYesYes70
966x51 Lig Shared51.910858.7379YesYesYesYes70
973x28 E1x50 Shared68.957735.4837YesNoYesYes67
981x50 2x50 Shared16.599459.0253YesYesYesYes99
991x50 7x50 Shared20.296351.8589YesYesYesNo99
1002x40 8x50 Shared57.683620.6188YesNoYesYes99
1012x46 3x42 Shared24.719483.2273NoNoYesYes98
102E1x50 E1x52 Shared12.425721.6033YesYesYesYes76
1033x29 4x61 Shared12.16931.7537NoNoNoNo56
1044x61 5x39 Shared18.139836.6271NoNoYesNo67
1053x37 4x56 Shared10.225299.0706NoNoNoNo76
1063x50 6x37 Shared40.262636.6027NoNoYesNo98
1073x54 5x65 Shared26.619217.91NoNoNoNo98
1083x51 5x61 Shared19.533534.1996YesNoNoNo89
1095x47 6x52 Shared14.846393.1209YesYesYesYes87
1105x47 6x49 Shared11.369521.9457YesYesNoNo86
1112x46 2x50 Shared12.01582.8177NoNoYesYes99
1126x51 7x38 Shared51.316732.2001YesYesNoNo76
1135x54 6x41 Shared13.4610.6824YesNoYesNo88
1147x38 7x42 5ht2b_on034.2485NoNoYesYes68
1156x51 6x52 5ht2b_on6.0148293.1454YesYesYesYes77
1165x47 6x44 5ht2b_on099.5903YesYesYesNo89
1173x40 6x44 5ht2b_on0100NoNoYesNo89
1183x40 5x50 5ht2b_on2.4939599.9266NoNoYesNo89
1193x41 5x50 5ht2b_on9.9097899.7432NoNoYesNo69
1203x41 4x52 5ht2b_on7.4525199.6331NoNoNoNo65
1214x52 4x56 5ht2b_on099.3763NoNoNoNo56
1223x37 4x53 5ht2b_on098.7159NoNoNoNo78
1233x38 4x53 5ht2b_on0.57214187.7339NoNoNoNo88
1243x38 3x42 5ht2b_on083.5637NoNoYesYes88
1253x34 4x53 5ht2b_on1.6944212.26YesNoNoNo68
1263x34 3x35 5ht2b_on5.530710.4256YesNoYesYes66
1277x50 7x51 5ht2b_on050.7521YesNoNoNo96
1287x51 7x55 5ht2b_on9.7924249.6331NoNoNoNo66
1297x54 7x55 5ht2b_on046.2028YesNoNoNo76
1307x54 8x50 5ht2b_on9.1909342.644YesNoYesYes79
1311x56 8x50 5ht2b_on012.2233NoNoYesYes89
1321x56 8x54 5ht2b_on2.420610.7374NoNoYesNo87
1332x37 2x40 5ht2b_on2.4646117.91NoNoYesNo79
1342x37 2x39 5ht2b_on016.473NoNoNoNo78
1352x39 I2x57 5ht2b_on015.0177NoNoNoNo87
1362x38 I2x57 5ht2b_on4.8118512.2172NoNoNoNo67
1372x38 4x39 5ht2b_on7.2544610.7374NoNoNoYes64
1382x50 7x49 5ht2b_on050.7643YesYesNoNo99
1392x56 7x42 5ht2b_on6.4035819.671NoNoYesYes78
1402x56 3x28 5ht2b_on039.8924NoNoYesNo76
1412x62 E1x52 5ht2b_on012.0704NoNoYesYes56
1423x32 Lig 5ht2b_on7.1004226.4339YesYesYesYes80
1433x29 E2.I195 5ht2b_on021.536NoNoNoNo55
144E2.I195 E2.I205 5ht2b_on020.3375NoNoNoNo52
145E2.I205 E2.P202 5ht2b_on017.6043NoNoNoNo23
146E2.N201 E2.P202 5ht2b_on2.5159514.7915YesYesNoNo23
1473x43 7x49 5ht2b_on4.2690546.215NoNoNoNo99
1483x43 7x53 5ht2b_on045.0165NoNoNoYes99
1495x54 6x44 5ht2b_on019.1452YesNoYesNo89
1503x50 7x53 5ht2b_on037.5749NoNoNoYes99
1515x61 6x37 5ht2b_on035.4714NoNoYesNo98
1523x51 3x55 5ht2b_on9.8804430.2923YesNoNoNo87
1533x55 5x64 5ht2b_on020.7472NoNoNoNo76
1543x54 5x64 5ht2b_on019.3347NoNoNoNo96
1553x29 E2x52 5ht2b_on010.2727NoNoNoNo55
1566x49 6x53 5ht2b_on7.5918719.243NoNoNoNo66
1576x53 6x57 5ht2b_on3.799617.8244NoNoNoNo65
1586x57 E3.C353 5ht2b_on013.3851NoNoNoNo54
1597x30 E3.C353 5ht2b_on8.4207412.0276NoNoNoNo44
1605x65 6x30 5ht2b_on015.1584NoNoNoNo88
1615x68 6x30 5ht2b_on2.4866112.2111NoNoNoNo78
1625x68 6x28 5ht2b_on010.7313NoNoNoNo74
1632x56 3x32 5ht2b_on6.4549322.496NoNoYesYes78

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
3x32LigShared15.3518.041110
3x33LigShared12.3615.140010
3x36LigShared7.935.871110
3x37Lig5ht2b_off5.5600010
E2x51Lig5ht2b_off3.3700010
E2x52Lig5ht2b_off5.2200010
5x39LigShared5.512.860010
6x51LigShared16.5415.231110
6x52Lig5ht2b_off11.9401110
7x38LigShared3.374.661110
7x42Lig5ht2b_off3.5401110
2x563x32Shared5.842.921121
2x567x42Shared3.793.791121
2x577x39Shared4.653.491122
2x577x42Shared3.594.791121
3x294x61Shared2.984.470022
3x323x36Shared4.424.421111
3x327x42Shared6.910.341111
3x334x57Shared3.393.390012
3x374x56Shared4.563.040012
4x605x395ht2b_off7.2200021
4x615x39Shared5.243.930021
5x36E2x52Shared6.0912.187021
5x365x395ht2b_off4.2907021
5x406x55Shared8.417.010021
5x446x52Shared5.283.960021
5x446x555ht2b_off4.4700021
5x476x48Shared4.013.011122
5x476x52Shared24.6518.221121
6x486x515ht2b_off6.0101121
6x486x52Shared8.028.021121
6x516x52Shared9.655.361111
6x516x555ht2b_off6.0401111
6x517x34Shared4.874.871112
6x517x38Shared3.933.931111
7x387x395ht2b_off3.6801112
7x397x42Shared6.753.861121
5x385x395ht2b_off2.3900021
3x375x461Shared1.823.360012
4x565x435ht2b_off1.7600022
3x29E2x525ht2b_on05.540021
3x374x535ht2b_on06.40012
5x395x435ht2b_on03.010012
7x387x425ht2b_on06.311111
6x55Lig5ht2b_on02.150010
E2.T210E2x515ht2b_on01.590021

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
5ht2b_off 6DRZ-5-HT2B-Methysergide
5ht2b_on 7SRR-5-HT2B-LSD-chim(NtGi2L-Gs-CtGq)/β1/γ2
Network Difference
Value 5ht2b_off 5ht2b_on
Imin 2.98 2.85
Number of Linked Nodes 284 255
Number of Specific Nodes 38 (13.38%) 9  (3.53%)
Number of Shared Nodes 246 (86.62%) 246  (96.47%)
Number of Links 325 263
Number of Specific Links 155 (47.69%) 93  (35.36%)
Number of Shared Links 170 (52.31%) 170  (64.64%)
Number of Hubs 44 23
Number of Specific Hubs 26 (59.09%) 5  (21.74%)
Number of Shared Hubs 18 (40.91%) 18  (78.26%)
Average % Shared Neighbours (Jaccard) 42.25
Average % Shared Neighbours (Otsuka) 51.14
Average % Shared Neighbours (Overlap Coefficient) 60.30
Average % Shared Cliques (k3-6) 79.38
Graphlets Similarity 0.595124
Paths Difference
Value 5ht2b_off 5ht2b_on
Number Of Nodes in MetaPath 101 69
Specific Nodes in MetaPath 59 (58.42%) 27  (39.13%)
Shared Nodes in MetaPath 246 (86.62%) 246  (86.62%)
Number Of Links MetaPath 113 69
Specific Links in MetaPath 94 (83.19%) 50  (72.46%)
Shared Links in MetaPath 170 (52.31%) 170  (52.31%)
Number of Shortest Paths 51510 31485
Length Of Smallest Path 3 3
Average Path Length 11.6294 18.4435
Length of Longest Path 27 45
Minimum Path Strength 1.22 1.3
Average Path Strength 5.72805 5.54714
Maximum Path Strength 18.295 16.635
Minimum Path Correlation 0.7 0.7
Average Path Correlation 0.943545 0.930507
Maximum Path Correlation 0.99 0.99
Minimum % Of Corr. Nodes 5.26316 2.7027
Average % Of Corr. Nodes 62.9928 51.9323
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 47.8568 27.1343
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

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