Orange: nodes, hubs and links specific of 5ht2c_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of 5ht2c_on network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner 5ht2c_off Avg Int. Strength 5ht2c_on Avg Int. Strength 5ht2c_off Num Of Links 5ht2c_on Num Of Links ConSurf
11x51 5ht2c_off4.24252.94414
2I1x50 5ht2c_off7.13255.65438
32x40 5ht2c_off6.57756.97667439
4E1x50 5ht2c_off6.524291.23717
5E1x52 5ht2c_off5.36250406
63x26 5ht2c_off5.3951.76426
73x50 5ht2c_off5.183334.91639
8E2x50 5ht2c_off6.62255.275429
95x36 5ht2c_off6.88756.33333435
105x39 5ht2c_off4.435.58333437
115x48 5ht2c_off4.65757.98333436
125x50 5ht2c_off3.8953.09833439
136x41 5ht2c_off6.8584.39167538
146x44 5ht2c_off9.23759.6675429
156x47 5ht2c_off4.35255.17167438
167x35 5ht2c_off6.96755.26415
177x38 5ht2c_off7.0456.46427
187x56 5ht2c_off4.282.93527
198x49 5ht2c_off5.70759.205416
208x54 5ht2c_off6.1154.735427
218x57 5ht2c_off5.018575.36725
222x50 Shared6.4326.84559
232x57 Shared6.6955.00375448
243x25 Shared5.7554.155649
253x35 Shared6.6464.86833567
263x42 Shared7.60258.287458
273x51 Shared5.68757.8375448
284x50 Shared5.0764.04143579
29E2.F201 Shared9.4554.995454
305x47 Shared11.792510.0538448
315x58 Shared4.7466.2925549
326x48 Shared9.325.857558
336x51 Shared6.903335.18125647
346x52 Shared12.3428.6725547
357x39 Shared6.6654.419657
367x42 Shared6.5145.777558
377x53 Shared7.634.94083469
388x50 Shared5.648574.246758
39Lig Shared7.484677.683331590
401x43 5ht2c_on3.033.76247
411x50 5ht2c_on7.063334.8925349
421x52 5ht2c_on4.533333.07375347
43I1x51 5ht2c_on5.444.0375148
442x53 5ht2c_on8.083.11875147
45E1x49 5ht2c_on1.593.30875143
463x46 5ht2c_on3.974.5325349
47I2x53 5ht2c_on1.317.44125148
484x39 5ht2c_on5.9254.21244
494x61 5ht2c_on4.765.222356
50E2.K199 5ht2c_on9.286677.0775343
515x65 5ht2c_on3.2452.40875248
527x37 5ht2c_on8.806674.18625346
   
Orange: nodes, hubs and links specific of 5ht2c_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of 5ht2c_on network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner 5ht2c_off Recurrence 5ht2c_on Recurrence 5ht2c_off Hub1? 5ht2c_on Hub1? 5ht2c_off Hub2? 5ht2c_on Hub2? ConSurf1 ConSurf2
11x33 NT.V52 5ht2c_off15.15610NoNoNoNo43
22x65 NT.V52 5ht2c_off17.29650NoNoNoNo53
32x61 2x65 5ht2c_off19.43057.89091NoNoNoNo65
41x39 2x61 5ht2c_off21.55829.64374NoNoNoNo76
52x56 3x28 5ht2c_off61.39150NoNoNoNo75
63x28 E1x50 5ht2c_off58.05470NoNoYesNo57
7E1x50 E1x51 5ht2c_off11.86030YesNoNoNo73
8E1x50 E1x52 5ht2c_off13.53350YesNoYesNo76
92x64 7x39 5ht2c_off12.85161.7908NoNoYesYes67
101x35 2x64 5ht2c_off14.88150NoNoNoNo66
111x32 1x35 5ht2c_off11.91720NoNoNoNo46
122x57 7x39 5ht2c_off13.00940YesYesYesYes87
131x56 8x57 5ht2c_off12.56750NoNoYesNo75
147x53 8x50 5ht2c_off43.32480YesYesYesYes98
157x49 7x53 5ht2c_off53.81191.85408NoNoYesYes99
162x50 7x49 5ht2c_off63.07420YesYesNoNo99
172x46 2x50 5ht2c_off77.18229.05524NoNoYesYes99
183x33 4x57 5ht2c_off90.86720NoNoNoNo68
197x42 Lig 5ht2c_off51.3590YesYesYesYes80
201x50 2x50 5ht2c_off11.34588.2073NoYesYesYes99
211x53 8x54 5ht2c_off11.78770NoNoYesNo97
224x38 I2x57 5ht2c_off14.54680NoNoNoNo86
234x38 4x41 5ht2c_off20.68690NoNoNoNo87
244x41 4x45 5ht2c_off24.50670.00632791NoNoNoNo76
252x42 4x45 5ht2c_off28.08030NoNoNoNo86
263x46 6x37 5ht2c_off35.79880NoYesNoNo98
276x37 6x41 5ht2c_off58.85660NoNoYesNo88
283x43 6x41 5ht2c_off96.19280NoNoYesNo98
293x43 6x44 5ht2c_off97.97010NoNoYesNo99
303x40 6x44 5ht2c_off52.57440NoNoYesNo89
313x40 Lig 5ht2c_off58.79980NoNoYesYes80
326x44 6x48 5ht2c_off61.09486.16339YesNoYesYes98
336x48 Lig 5ht2c_off52.57440YesYesYesYes80
347x35 Lig 5ht2c_off13.12620YesNoYesYes50
353x25 E1x50 5ht2c_off16.84190YesYesYesNo97
363x47 6x41 5ht2c_off21.52030NoNoYesNo88
373x47 5x57 5ht2c_off19.50940NoNoNoNo86
383x50 5x65 5ht2c_off14.36370YesNoNoYes98
395x58 6x41 5ht2c_off11.80987.35936YesYesYesNo98
403x51 5x57 5ht2c_off17.54597.38467YesYesNoNo86
413x54 5x65 5ht2c_off12.54850NoNoNoYes98
425x47 Lig 5ht2c_off11.25110YesYesYesYes80
436x40 7x49 5ht2c_off11.06480NoNoNoNo89
446x44 7x45 5ht2c_off16.40940YesNoNoNo99
456x47 7x45 5ht2c_off14.35438.19465YesNoNoNo89
467x38 7x39 5ht2c_off27.00070YesNoYesYes77
477x38 Lig 5ht2c_off21.94650YesNoYesYes70
481x39 7x39 Shared23.36413.2949NoNoYesYes77
497x39 7x42 Shared24.140524.179YesYesYesYes78
502x56 7x42 Shared33.712233.0254NoNoYesYes78
511x56 8x50 Shared13.779720.996NoNoYesYes78
522x46 3x42 Shared78.037710.1183NoNoYesYes98
533x42 4x50 Shared80.086592.223YesYesYesYes89
543x35 4x50 Shared85.453299.0128YesYesYesYes79
553x34 3x35 Shared88.584834.1138NoNoYesYes67
563x34 4x57 Shared90.112732.1205NoNoNoNo68
573x33 Lig Shared10021.9958NoNoYesYes60
583x32 Lig Shared30.28772.3723NoNoYesYes80
592x56 3x32 Shared29.497754.9832NoNoNoNo78
602x42 3x46 Shared32.073797.9561NoNoNoYes89
613x33 4x61 Shared19.17820.7682NoNoNoYes66
623x50 6x37 Shared23.417683.0665YesNoNoNo98
633x51 3x55 Shared10.168312.795YesYesNoNo86
644x61 5x39 Shared15.800119.5596NoYesYesNo67
656x51 7x34 Shared10.322957.1157YesYesNoNo74
662x57 7x42 5ht2c_on017.4714YesYesYesYes88
671x43 2x57 5ht2c_on4.3596319.1293NoYesYesYes78
681x46 2x57 5ht2c_on4.3596313.0292NoNoYesYes78
692x53 2x56 5ht2c_on087.8694NoYesNoNo77
702x53 3x35 5ht2c_on096.3172NoYesYesYes77
712x52 3x35 5ht2c_on1.3069471.4231NoNoYesYes67
722x48 2x52 5ht2c_on070.1829NoNoNoNo66
731x54 2x48 5ht2c_on1.3006368.93NoNoNoNo76
741x54 2x44 5ht2c_on3.7945565.0952NoNoNoNo75
751x57 2x44 5ht2c_on6.2695363.779NoNoNoNo85
761x57 I1x50 5ht2c_on062.4628NoNoYesNo88
778x50 I1x50 5ht2c_on8.4319833.038YesYesYesNo88
781x56 8x54 5ht2c_on019.3001NoNoYesNo77
791x52 8x54 5ht2c_on7.2386917.5916NoYesYesNo77
801x52 8x57 5ht2c_on0.44196110.7132NoYesYesNo75
812x40 I1x50 5ht2c_on0.15784328.0896YesNoYesNo98
822x39 2x40 5ht2c_on028.8363NoNoYesNo89
832x39 I1x51 5ht2c_on027.2164NoNoNoYes88
842x37 I1x51 5ht2c_on010.7385NoNoNoYes78
852x42 3x42 5ht2c_on0100NoNoYesYes88
863x32 7x42 5ht2c_on0.082078517.8067NoNoYesYes88
873x29 4x61 5ht2c_on052.933NoNoNoYes56
883x25 3x29 5ht2c_on5.4834749.1426YesYesNoNo95
893x25 E2.F201 5ht2c_on0.5335143.2133YesYesYesYes94
905x39 Lig 5ht2c_on020.281YesNoYesYes70
913x30 4x61 5ht2c_on031.2599NoNoNoYes66
926x52 Lig 5ht2c_on0.83972639.0685YesYesYesYes70
935x47 6x52 5ht2c_on2.1466746.1621YesYesYesYes87
945x47 6x48 5ht2c_on033.4493YesYesYesYes88
953x40 6x48 5ht2c_on014.2125NoNoYesYes88
967x38 7x42 5ht2c_on1.3448230.8486YesNoYesYes78
976x51 7x38 5ht2c_on7.311330.4879YesYesYesNo77
983x40 5x50 5ht2c_on8.6845412.2192NoNoYesNo89
993x46 7x53 5ht2c_on015.516NoYesYesYes99
1003x46 3x50 5ht2c_on080.3139NoYesYesNo99
1015x61 6x37 5ht2c_on033.2595NoNoNoNo98
1023x51 5x61 5ht2c_on0.92180426.6658YesYesNoNo89
103I1x51 I2x57 5ht2c_on013.7885NoYesNoNo86
104I2x53 I2x57 5ht2c_on012.2319NoYesNoNo86
1053x55 3x56 5ht2c_on8.0973611.0042NoNoNoNo65
106E2.F201 E2.V200 5ht2c_on030.7157YesYesNoNo43
107E2.K199 E2.V200 5ht2c_on026.4507NoYesNoNo33
1085x36 E2.K199 5ht2c_on3.8703213.3519YesNoNoYes53
1095x58 6x37 5ht2c_on057.1221YesYesNoNo98
1105x58 5x62 5ht2c_on3.8955748.4655YesYesNoNo95
1115x62 5x66 5ht2c_on023.3816NoNoNoNo56
1125x62 6x34 5ht2c_on1.9604123.5651NoNoNoNo57
1135x65 5x66 5ht2c_on021.768NoYesNoNo86
1145x65 6x34 5ht2c_on021.9389NoYesNoNo87
1155x65 6x30 5ht2c_on037.2081NoYesNoNo87
1165x68 6x30 5ht2c_on013.8265NoNoNoNo77
1175x68 5x71 5ht2c_on010.3968NoNoNoNo70
1185x69 6x30 5ht2c_on020.667NoNoNoNo67
1195x69 6x27 5ht2c_on0.012627517.2625NoNoNoNo64
1206x48 7x45 5ht2c_on010.2133YesYesNoNo89
1216x54 7x34 5ht2c_on9.3885250.3449NoNoNoNo54
1226x54 7x37 5ht2c_on3.7756127.0645NoNoNoYes56
1236x54 7x30 5ht2c_on4.6500621.749NoNoNoNo54
1247x27 7x30 5ht2c_on016.3577NoNoNoNo14
1257x27 E3.E338 5ht2c_on013.6936NoNoNoNo11
126E3.C341 E3.E338 5ht2c_on010.9789NoNoNoNo31
1277x33 7x37 5ht2c_on1.5026719.085NoNoNoYes56
1287x29 7x33 5ht2c_on0.39145116.3956NoNoNoNo45
1297x26 7x29 5ht2c_on1.3890213.6936NoNoNoNo44
1307x26 7x28 5ht2c_on2.6549210.9789NoNoNoNo41
1318x47 8x50 5ht2c_on6.1306312.485NoNoYesYes88
1322x53 2x54 5ht2c_on010.1753NoYesNoNo76
1333x30 4x57 5ht2c_on031.9433NoNoNoNo68
1346x51 Lig 5ht2c_on7.5575331.2852YesYesYesYes70

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
2x563x32Shared7.313.151321
2x567x42Shared5.055.681321
2x577x395ht2c_off8.1400022
7x35E1.Y1185ht2c_off15.1200012
3x327x42Shared8.0510.341311
3x32LigShared14.9513.1651310
3x334x575ht2c_off3.2300012
3x334x61Shared4.613.840012
3x33LigShared6.9119.2250010
3x36LigShared12.199.870010
3x375x4615ht2c_off5.0300011
3x37Lig5ht2c_off4.2700010
3x405x50Shared3.393.390012
3x406x445ht2c_off7.5400012
3x40Lig5ht2c_off4.9600010
4x615x39Shared6.284.3950221
4x645x395ht2c_off3.7700021
E2.T206E2x515ht2c_off4.7600221
E2x51Lig5ht2c_off3.4500010
5x365x395ht2c_off4.7800021
5x445x485ht2c_off3.9601312
5x446x52Shared3.963.961311
5x44LigShared5.227.8651310
5x475x48Shared4.299.651012
5x475x51Shared3.652.441012
5x476x52Shared34.2924.1151011
5x47Lig5ht2c_off4.9401010
6x446x48Shared10.027.5150021
6x447x455ht2c_off12.0800022
6x486x515ht2c_off7.0201011
6x486x525ht2c_off5.0101011
6x487x41Shared12.676.3351012
6x48Lig5ht2c_off11.8801010
6x516x52Shared8.573.7551311
6x516x555ht2c_off7.2501312
6x517x34Shared4.873.0451312
6x517x38Shared5.247.871311
6x51LigShared8.476.0551310
6x52LigShared9.882.861310
6x557x34Shared5.492.751022
7x317x35Shared6.575.2601021
7x35Lig5ht2c_off4.7800010
7x387x395ht2c_off3.6801012
7x387x42Shared6.315.051011
7x38Lig5ht2c_off12.9501010
7x397x42Shared7.724.8251021
7x42Lig5ht2c_off5.4401310
E2.V202E2x51Shared3.213.210021
4x605x395ht2c_off2.8900021
5x43LigShared1.981.740010
5x425x43Shared1.762.6450021
4x565x4615ht2c_off1.700021
7x327x355ht2c_off1.4001021
2x577x425ht2c_on02.990021
3x334x565ht2c_on03.210012
3x374x565ht2c_on04.760012
3x406x485ht2c_on02.9350011
5x39E2x525ht2c_on07.310012
5x39Lig5ht2c_on05.0450010
5x461Lig5ht2c_on03.3250010
5x476x485ht2c_on04.011011
6x487x455ht2c_on08.491012
7x317x325ht2c_on011.47501022
4x604x645ht2c_on00.8450022

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
5ht2c_off 6BQH-5-HT2C-Ritanserin
5ht2c_on 8DPF-5-HT2C-Lorcaserin-chim(NtGi2L-Gs-CtGq)/&β;1/&γ;2
8DPG-5-HT2C-Psilocin-chim(NtGi2L-Gs-CtGq)/&β;1/&γ;2
Network Difference
Value 5ht2c_off 5ht2c_on
Imin 3.23 2.715
Number of Linked Nodes 275 256
Number of Specific Nodes 31 (11.27%) 12  (4.69%)
Number of Shared Nodes 244 (88.73%) 244  (95.31%)
Number of Links 306 278
Number of Specific Links 158 (51.63%) 130  (46.76%)
Number of Shared Links 148 (48.37%) 148  (53.24%)
Number of Hubs 39 31
Number of Specific Hubs 21 (53.85%) 13  (41.94%)
Number of Shared Hubs 18 (46.15%) 18  (58.06%)
Average % Shared Neighbours (Jaccard) 36.76
Average % Shared Neighbours (Otsuka) 44.58
Average % Shared Neighbours (Overlap Coefficient) 52.19
Average % Shared Cliques (k3-6) 54.05
Graphlets Similarity 0.529637
Paths Difference
Value 5ht2c_off 5ht2c_on
Number Of Nodes in MetaPath 65 83
Specific Nodes in MetaPath 27 (41.54%) 45  (54.22%)
Shared Nodes in MetaPath 244 (88.73%) 244  (88.73%)
Number Of Links MetaPath 65 87
Specific Links in MetaPath 47 (72.31%) 69  (79.31%)
Shared Links in MetaPath 148 (48.37%) 148  (48.37%)
Number of Shortest Paths 73126 41361
Length Of Smallest Path 3 3
Average Path Length 14.153 14.879
Length of Longest Path 32 30
Minimum Path Strength 1.38 0.8325
Average Path Strength 6.26086 5.64522
Maximum Path Strength 21.43 17.03
Minimum Path Correlation 0.7 0.7
Average Path Correlation 0.922597 0.918967
Maximum Path Correlation 0.99 0.99
Minimum % Of Corr. Nodes 3.7037 3.84615
Average % Of Corr. Nodes 47.8765 42.1392
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 42.6965 39.1705
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

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