Orange: nodes, hubs and links specific of adrenergic_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of adrenergic_on network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner adrenergic_off Avg Int. Strength adrenergic_on Avg Int. Strength adrenergic_off Num Of Links adrenergic_on Num Of Links ConSurf
11x60 adrenergic_off00436
22x57 adrenergic_off00438
3E1x52 adrenergic_off42.85710435
43x37 adrenergic_off00437
53x41 adrenergic_off00426
64x60 adrenergic_off00417
7E2x52 adrenergic_off250436
85x50 adrenergic_off00439
9I3 adrenergic_off250823
108x49 adrenergic_off250427
118x54 adrenergic_off00437
126x31 adrenergic_off00410
13Lig Shared10010012110
142x42 Shared64.285756.9444668
152x50 Shared069.4444559
162x65 Shared00445
17E1x50 Shared10091.6667758
183x28 Shared2541.6667545
193x49 Shared55.95244.16667649
203x51 Shared041.6667458
21I2x53 Shared2525767
22I2x57 Shared2545.8333546
234x50 Shared00449
24E2 Shared100501194
255x39 Shared025448
265x47 Shared2595.8333468
275x58 Shared095.8333569
286x44 Shared10056.9444559
296x48 Shared96.4286100588
306x51 Shared96.428695.8333667
316x52 Shared96.428670.8333557
32E3 Shared67.261950753
337x42 Shared10095.8333567
347x53 Shared45.833365.2778559
358x50 Shared10075558
361x31 adrenergic_on00253
371x50 adrenergic_on045.8333359
382x40 adrenergic_on08.33333248
392x46 adrenergic_on022.2222149
403x24 adrenergic_on250345
413x42 adrenergic_on050147
425x69 adrenergic_on00145
436x30 adrenergic_on00140
446x49 adrenergic_on00247
456x55 adrenergic_on029.1667347
467x37 adrenergic_on00345
477x39 adrenergic_on00346
487x49 adrenergic_on050349
   
Orange: nodes, hubs and links specific of adrenergic_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of adrenergic_on network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner adrenergic_off Recurrence adrenergic_on Recurrence adrenergic_off Hub1? adrenergic_on Hub1? adrenergic_off Hub2? adrenergic_on Hub2? ConSurf1 ConSurf2
13x28 Lig adrenergic_off44.33070YesYesYesYes50
23x33 Lig adrenergic_off34.40677.23334NoNoYesYes60
32x57 7x42 adrenergic_off10.85348.75203YesNoYesYes87
42x53 2x56 adrenergic_off52.28050NoNoNoNo88
57x49 7x53 adrenergic_off63.45470NoYesYesYes99
67x53 8x50 adrenergic_off53.8310YesYesYesYes98
78x50 8x54 adrenergic_off14.99490YesYesYesNo87
88x50 I1x50 adrenergic_off30.38040.207093YesYesNoNo88
98x49 I1x50 adrenergic_off19.72030YesNoNoNo78
103x34 4x50 adrenergic_off26.15670NoNoYesYes69
113x34 4x57 adrenergic_off30.70533.74447NoNoNoNo68
123x33 4x57 adrenergic_off32.21065.61205NoNoNoNo68
133x43 6x44 adrenergic_off63.44230NoNoYesYes89
143x39 6x44 adrenergic_off69.14250NoNoYesYes99
152x50 3x39 adrenergic_off67.85111.42913YesYesNoNo99
162x59 3x28 adrenergic_off12.76584.05418NoNoYesYes55
174x60 5x39 adrenergic_off41.64921.87317YesNoYesYes78
184x58 4x60 adrenergic_off20.88830NoNoYesNo47
193x30 4x58 adrenergic_off15.67763.74447NoNoNoNo64
205x39 E2x52 adrenergic_off22.480YesYesYesNo86
213x40 6x44 adrenergic_off31.15771.35077NoNoYesYes89
223x40 5x50 adrenergic_off29.64844.16239NoNoYesNo89
233x41 4x53 adrenergic_off24.33480YesNoNoNo68
243x41 5x50 adrenergic_off23.80830YesNoYesNo69
253x43 6x41 adrenergic_off59.90540NoNoNoNo88
265x58 6x41 adrenergic_off56.26985.35644YesYesNoNo98
275x58 5x61 adrenergic_off35.38560YesYesNoNo99
283x51 5x61 adrenergic_off20.23039.31547YesYesNoNo89
296x55 Lig adrenergic_off12.60951.52428NoYesYesYes70
305x40 6x55 adrenergic_off20.30853.58029NoNoNoYes67
315x40 6x59 adrenergic_off19.08292.87132NoNoNoNo65
326x40 7x49 adrenergic_off15.97780NoNoNoYes89
336x40 7x52 adrenergic_off15.4760NoNoNoNo88
345x37 6x59 adrenergic_off15.35681.44219NoNoNoNo45
355x37 E3 adrenergic_off14.09010NoNoYesYes43
362x61 2x65 adrenergic_off14.25460NoNoYesYes65
373x54 5x61 adrenergic_off13.89277.95724NoNoNoNo89
383x54 5x64 adrenergic_off12.3346.59527NoNoNoNo86
395x64 5x67 adrenergic_off10.3275.23331NoNoNoNo65
404x59 4x60 adrenergic_off10.45860NoNoYesNo77
411x46 7x46 adrenergic_off20.61690NoNoNoNo89
421x46 7x47 adrenergic_off17.19514.27993NoNoNoNo86
431x45 7x47 adrenergic_off15.47192.8564NoNoNoNo56
441x41 1x45 adrenergic_off11.99671.42913NoNoNoNo55
455x58 I3 adrenergic_off13.99140YesYesYesNo93
463x32 Lig Shared21.065232.5827NoNoYesYes70
472x56 3x28 Shared27.970466.9994NoNoYesYes85
482x56 3x32 Shared26.111531.1013NoNoNoNo87
493x36 Lig Shared28.542137.0846NoNoYesYes60
506x51 Lig Shared28.961538.8552YesYesYesYes70
517x42 Lig Shared21.793171.0573YesYesYesYes70
521x39 2x61 Shared16.0628.3252NoNoNoNo76
531x39 7x39 Shared17.380230.1629NoNoNoYes76
547x39 7x42 Shared18.893740.9429NoYesYesYes67
551x50 2x50 Shared19.284421.0713NoYesYesYes99
562x50 7x46 Shared40.974712.7428YesYesNoNo99
572x53 7x46 Shared49.335811.3416NoNoNoNo89
582x50 7x49 Shared81.048724.8344YesYesNoYes99
592x42 3x49 Shared32.6753100YesYesYesYes89
602x42 4x46 Shared39.860215.4611YesYesNoNo88
612x45 4x46 Shared40.892515.5544NoNoNoNo98
622x45 4x50 Shared42.932311.4293NoNoYesYes99
636x44 6x48 Shared10068.8259YesYesYesYes98
643x36 6x48 Shared28.295337.3533NoNoYesYes68
656x48 6x51 Shared40.374361.5105YesYesYesYes87
666x48 6x52 Shared34.250537.6947YesYesYesYes87
676x52 Lig Shared37.047157.3388YesYesYesYes70
683x28 E1x50 Shared18.280955.7249YesYesYesYes58
695x43 Lig Shared25.153219.6813NoNoYesYes70
705x39 5x43 Shared23.129818.0656YesYesNoNo87
71E2x52 Lig Shared58.811417.894YesNoYesYes60
725x461 Lig Shared14.447914.6533NoNoYesYes60
733x37 5x461 Shared12.658914.0264YesNoNoNo76
743x38 4x53 Shared20.004112.8137NoNoNoNo88
753x49 I2x53 Shared12.272319.0955YesYesYesYes97
76E2 E2x52 Shared32.490214.9257YesYesYesNo46
775x47 6x52 Shared14.061320.8903YesYesYesYes87
783x38 4x50 Shared18.992412.9256NoNoYesYes89
797x38 7x42 adrenergic_on3.8741518.4481NoNoYesYes67
806x51 7x38 adrenergic_on4.3059818.8828YesYesNoNo76
816x48 7x45 adrenergic_on066.324YesYesNoNo89
827x45 7x49 adrenergic_on064.6728NoNoNoYes99
835x54 6x44 adrenergic_on091.4886NoNoYesYes89
845x54 5x58 adrenergic_on090.8412NoNoYesYes89
853x50 5x58 adrenergic_on057.8033NoNoYesYes99
863x46 3x50 adrenergic_on052.167NoNoNoNo99
872x42 3x46 adrenergic_on3.3806395.2854YesYesNoNo89
882x39 3x49 adrenergic_on1.2502670.2905NoNoYesYes89
892x37 2x39 adrenergic_on070.7495NoNoNoNo78
902x37 2x40 adrenergic_on1.9617568.852NoNoNoYes78
912x40 8x50 adrenergic_on051.7845NoYesYesYes88
927x54 8x50 adrenergic_on020.9463NoNoYesYes78
937x54 8x54 adrenergic_on1.9617516.9406NoNoYesNo77
945x47 6x44 adrenergic_on022.118YesYesYesYes89
953x43 7x49 adrenergic_on049.7528NoNoNoYes89
963x43 7x53 adrenergic_on057.9451NoNoYesYes89
973x46 7x53 adrenergic_on044.5848NoNoYesYes99
983x37 4x53 adrenergic_on7.3205812.9237YesNoNoNo78
992x56 7x42 adrenergic_on039.4858NoNoYesYes87
100E1x50 E1x52 adrenergic_on6.6913440.3907YesYesYesNo85
101E1x51 E1x52 adrenergic_on8.0526420.241NoNoYesNo35
1023x24 E1x52 adrenergic_on016.1999NoYesYesNo55
1033x47 5x58 adrenergic_on026.4725NoNoYesYes99
1043x47 5x57 adrenergic_on2.0563425.4091NoNoNoNo96
1053x51 5x57 adrenergic_on4.1085724.4389YesYesNoNo86
1063x51 3x52 adrenergic_on012.6458YesYesNoNo85
1073x52 I2x53 adrenergic_on2.6526811.6196NoNoYesYes57
1088x47 8x50 adrenergic_on1.9617528.1274NoNoYesYes88
1093x49 I2x57 adrenergic_on8.7764812.5711YesYesYesYes96
1102x38 I2x57 adrenergic_on011.8435NoNoYesYes76
1113x56 I2x53 adrenergic_on017.45NoNoYesYes67
1125x58 6x37 adrenergic_on021.5396YesYesNoNo90
1135x62 6x37 adrenergic_on018.95NoNoNoNo50
1145x62 5x66 adrenergic_on3.6150516.5731NoNoNoNo55
1155x66 6x30 adrenergic_on015.2689NoNoNoYes50
1165x69 6x30 adrenergic_on010.4424NoYesNoYes50
1174x59 5x39 adrenergic_on014.5544NoNoYesYes78
118E1x49 E1x51 adrenergic_on4.5897612.1551NoNoNoNo43
1198x47 8x48 adrenergic_on022.1665NoNoNoNo85
1208x48 8x51 adrenergic_on5.379418.1738NoNoNoNo58
1217x55 8x51 adrenergic_on014.1663NoNoNoNo58
1221x52 8x54 adrenergic_on9.237112.9219NoNoYesNo77
1231x36 2x61 adrenergic_on026.0732NoNoNoNo66
1241x36 2x65 adrenergic_on1.8671623.8139NoNoYesYes65
1251x31 1x35 adrenergic_on7.4028412.4909NoYesNoNo35
1261x35 2x65 adrenergic_on9.2329817.0264NoNoYesYes55
1277x55 7x56 adrenergic_on1.4682310.1364NoNoNoNo57
1282x46 2x50 adrenergic_on011.1551NoYesYesYes99

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
3x28Ligadrenergic_off4.0439900010
3x32LigShared18.859314.44641110
3x33LigShared9.608999.270280010
3x36LigShared5.771138.028060010
5x43LigShared5.566194.458190010
5x461LigShared3.565954.179720010
6x51LigShared9.990659.452081110
6x52LigShared8.927264.657641110
6x55LigShared7.473095.853891110
7x38LigShared14.907215.13941110
7x42LigShared5.014586.247081110
2x563x28Shared3.692864.266670121
2x563x32Shared5.56197.307080121
2x577x39adrenergic_off3.7909501122
2x577x42Shared6.866732.499171121
2x593x28Shared5.233457.338750021
3x28E1x50Shared10.0476.786110012
3x327x42Shared7.895838.238611111
3x334x57Shared5.155543.499580012
3x366x48Shared6.852266.372920012
3x374x57adrenergic_off3.6186300022
3x375x461Shared8.136497.769440021
E2E2Shared63.256435.76081122
E2E2x52Shared7.732983.201111121
5x39E2Shared9.514826.373891122
5x395x43Shared10.52249.467781121
5x406x55Shared4.573214.410420021
5x446x52Shared3.5553.837080021
5x476x52Shared25.108620.15030121
6x486x51Shared4.867623.271111121
6x486x52Shared4.796436.599721121
6x516x52Shared7.873575.403751111
6x516x55Shared4.718155.797921111
6x517x34Shared6.65445.514861112
6x517x38Shared8.1343511.26861111
7x387x42Shared6.9606511.61611111
7x397x42Shared12.21685.252641021
E2x52LigShared6.192029.392781110
3x29E2x52Shared4.5352.463190021
5x39E2x52adrenergic_off3.700601121
2x603x28Shared3.525363.680420021
2x567x42adrenergic_on04.204170121
5x476x48adrenergic_on03.25750122
5x446x55adrenergic_on03.565690021

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
adrenergic_off alpha_off
beta_off
adrenergic_on alpha_on
beta_on
Network Difference
Value adrenergic_off adrenergic_on
Imin 3.55321 3.08653
Number of Linked Nodes 280 271
Number of Specific Nodes 11 (3.93%) 2  (0.74%)
Number of Shared Nodes 269 (96.07%) 269  (99.26%)
Number of Links 305 302
Number of Specific Links 117 (38.36%) 114  (37.75%)
Number of Shared Links 188 (61.64%) 188  (62.25%)
Number of Hubs 35 36
Number of Specific Hubs 12 (34.29%) 13  (36.11%)
Number of Shared Hubs 23 (65.71%) 23  (63.89%)
Average % Shared Neighbours (Jaccard) 49.19
Average % Shared Neighbours (Otsuka) 57.48
Average % Shared Neighbours (Overlap Coefficient) 65.66
Average % Shared Cliques (k3-6) 84.38
Graphlets Similarity 0.629408
Paths Difference
Value adrenergic_off adrenergic_on
Number Of Nodes in MetaPath 73 76
Specific Nodes in MetaPath 31 (42.47%) 34  (44.74%)
Shared Nodes in MetaPath 269 (96.07%) 269  (96.07%)
Number Of Links MetaPath 78 83
Specific Links in MetaPath 45 (57.69%) 50  (60.24%)
Shared Links in MetaPath 188 (61.64%) 188  (61.64%)
Number of Shortest Paths 64370 121654
Length Of Smallest Path 3 3
Average Path Length 12.5901 15.7339
Length of Longest Path 29 34
Minimum Path Strength 0.53125 0.372917
Average Path Strength 5.4931 5.1304
Maximum Path Strength 17.6317 13.8231
Minimum Path Correlation 0.70131 0.7025
Average Path Correlation 0.909938 0.913308
Maximum Path Correlation 0.988452 0.989167
Minimum % Of Corr. Nodes 4.34783 3.33333
Average % Of Corr. Nodes 43.1109 35.5036
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 43.6071 46.7701
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

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