Orange: nodes, hubs and links specific of cb1_on_allo network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of cb1_on network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner cb1_on_allo Avg Int. Strength cb1_on Avg Int. Strength cb1_on_allo Num Of Links cb1_on Num Of Links ConSurf
11x42 cb1_on_allo3.8951.88833426
21x49 cb1_on_allo8.1354.52333438
31x50 cb1_on_allo8.33.31889439
41x53 cb1_on_allo2.9052.83419
51x57 cb1_on_allo2.64.15778437
6I1x48 cb1_on_allo7.8353.32889436
72x37 cb1_on_allo4.30256.79667435
82x38 cb1_on_allo3.342.91333425
92x52 cb1_on_allo3.9752.19426
103x51 cb1_on_allo5.7059.99889438
11I2x57 cb1_on_allo3.312.94333526
12E2.Q261 cb1_on_allo4.1850401
13E2.I271 cb1_on_allo4.4854.385423
145x40 cb1_on_allo2.983.32667415
155x61 cb1_on_allo4.6052.26333439
165x62 cb1_on_allo2.493.16426
176x51 cb1_on_allo3.3352.64667437
186x58 cb1_on_allo6.45255.20667434
19Alloh34 cb1_on_allo6.214440900
201x46 Shared5.4645.24583547
21I1x50 Shared6.0544.38833549
222x40 Shared5.511675.42095679
232x46 Shared3.8954.4975449
242x50 Shared6.7854.99933459
252x61 Shared5.76255.59455
263x22 Shared5.6665.83083543
27I2x53 Shared5.7454.93733457
284x50 Shared5.365.41917449
29E2.F268 Shared5.415717.31583745
30E2.H270 Shared6.985.84333443
315x43 Shared4.7545.23944566
325x44 Shared2.863.15555
335x58 Shared4.398335.11611669
345x60 Shared8.76258.77133454
356x48 Shared4.8743.67857578
367x53 Shared3.858334.43133659
37Lig Shared7.10756.3683312140
38NT.L111 cb1_on7.466673.32167344
39I1x51 cb1_on2.263.17333148
402x42 cb1_on7.424.44833248
412x54 cb1_on6.2952.76583247
422x64 cb1_on7.126676.66267354
432x65 cb1_on8.126676.97417344
443x25 cb1_on5.975.52583349
453x32 cb1_on6.33.6675347
463x44 cb1_on5.576675.895347
474x39 cb1_on5.9552.43333241
484x52 cb1_on1.522.19417145
49E2.W255 cb1_on7.246673.90933355
50E2.N256 cb1_on3.853333.39417346
51E2.D266 cb1_on6.424.28333354
525x36 cb1_on104.905245
535x39 cb1_on3.783334.74417347
546x30 cb1_on4.386673.88667357
556x59 cb1_on1.493.88144
56E3.M371 cb1_on5.716674.80933351
577x34 cb1_on11.154.01264
587x47 cb1_on5.044.2275347
597x52 cb1_on2.8954.00083249
608x49 cb1_on5.756.22167146
   
Orange: nodes, hubs and links specific of cb1_on_allo network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of cb1_on network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner cb1_on_allo Recurrence cb1_on Recurrence cb1_on_allo Hub1? cb1_on Hub1? cb1_on_allo Hub2? cb1_on Hub2? ConSurf1 ConSurf2
12x61 2x65 cb1_on_allo23.53110.780883YesYesNoYes54
22x64 2x65 cb1_on_allo18.59910.776616NoYesNoYes44
37x31 E2.I267 cb1_on_allo15.17050NoNoNoNo24
4E2.F268 E2.I267 cb1_on_allo16.8549.57115YesYesNoNo54
51x32 NT.L111 cb1_on_allo28.37295.81609NoNoNoYes44
61x29 1x32 cb1_on_allo10.44720NoNoNoNo24
71x32 2x66 cb1_on_allo15.61632.92298NoNoNoNo44
81x38 1x39 cb1_on_allo33.52780NoNoNoNo57
91x39 2x61 cb1_on_allo35.96050NoNoYesYes75
101x41 1x42 cb1_on_allo31.96282.63281NoNoYesNo46
111x38 1x41 cb1_on_allo31.98180NoNoNoNo54
121x42 7x47 cb1_on_allo29.83350YesNoNoYes67
131x46 7x47 cb1_on_allo30.53544.12631YesYesNoYes77
141x46 1x49 cb1_on_allo32.16670YesYesYesNo78
151x49 7x50 cb1_on_allo22.85297.19863YesNoNoNo89
167x49 7x53 cb1_on_allo95.91690NoNoYesYes99
176x48 7x41 cb1_on_allo40.24285.44058YesYesNoNo87
183x36 7x41 cb1_on_allo40.35665.07361NoNoNoNo77
193x36 Lig cb1_on_allo39.54571.03264NoNoYesYes70
201x53 7x50 cb1_on_allo45.38820YesNoNoNo99
211x53 1x57 cb1_on_allo37.6820YesNoYesNo97
221x57 2x43 cb1_on_allo33.54671.25453YesNoNoNo78
232x40 2x43 cb1_on_allo32.41330YesYesNoNo98
242x37 2x40 cb1_on_allo17.83562.47066YesNoYesYes59
252x37 2x38 cb1_on_allo17.10060YesNoYesNo55
262x45 3x42 cb1_on_allo13.05547.80457NoNoNoNo98
272x46 3x42 cb1_on_allo15.19899.07617YesYesNoNo98
282x45 4x46 cb1_on_allo10.90252.60721NoNoNoNo98
293x28 Alloh34 cb1_on_allo17.04840NoNoYesNo60
302x60 3x28 cb1_on_allo18.5471.19906NoNoNoNo46
312x60 Lig cb1_on_allo19.9272.35545NoNoYesYes40
322x66 E1.F180 cb1_on_allo10.44721.46362NoNoNoNo44
333x22 3x26 cb1_on_allo39.13310YesYesNoNo35
343x26 4x61 cb1_on_allo40.89254.43781NoNoNoNo55
354x61 5x39 cb1_on_allo42.64240NoNoNoYes57
365x39 E2.I271 cb1_on_allo52.94260NoYesYesNo73
37E2.F268 E2.I271 cb1_on_allo53.48793.35822YesYesYesNo53
383x22 E2.H270 cb1_on_allo22.64433.07659YesYesYesYes33
395x51 6x48 cb1_on_allo10.45193.37103NoNoYesYes68
403x43 5x54 cb1_on_allo15.43130NoNoNoNo88
415x54 5x58 cb1_on_allo15.15630NoNoYesYes89
425x36 E2.W255 cb1_on_allo13.5066.97248NoYesNoYes55
435x36 E2.S262 cb1_on_allo15.39811.20333NoYesNoNo53
44E2.C257 E2.S262 cb1_on_allo17.28080NoNoNoNo93
45E2.C257 E2.H270 cb1_on_allo21.01770NoNoYesYes93
466x55 E2.F268 cb1_on_allo19.17770NoNoYesYes65
475x44 6x52 cb1_on_allo24.60764.72797YesYesNoNo57
485x61 5x62 cb1_on_allo36.48220YesNoYesNo96
495x66 6x30 cb1_on_allo11.79872.66695NoNoNoYes57
505x62 6x33 cb1_on_allo32.28530YesNoNoNo68
516x48 6x52 cb1_on_allo24.5275.87156YesYesNoNo87
525x44 6x55 cb1_on_allo19.05915.21442YesYesNoNo56
531x50 7x50 cb1_on_allo23.55018.35076YesNoNoNo99
542x65 NT.L111 Shared38.407613.7487NoYesNoYes44
552x61 Lig Shared52.714914.1583YesYesYesYes50
562x64 Lig Shared20.187810.2496NoYesYesYes40
57E2.F268 Lig Shared63.71710.0405YesYesYesYes50
582x46 2x50 Shared34.594816.134YesYesYesYes99
592x46 3x43 Shared48.897494.4613YesYesNoNo98
603x43 7x53 Shared41.025394.0815NoNoYesYes89
617x45 7x49 Shared96.927100NoNoNoNo99
626x48 7x45 Shared10099.7866YesYesNoNo89
636x48 6x51 Shared42.13523.6783YesYesYesNo87
646x51 7x34 Shared42.338922.2872YesNoNoYes74
657x34 Lig Shared42.580713.0062NoYesYesYes40
662x38 I2x57 Shared11.978925.2998YesNoYesNo56
675x58 7x53 Shared69.312832.1101YesYesYesYes99
685x60 5x64 Shared16.389213.0019YesYesNoNo45
693x54 5x64 Shared23.369816.501NoNoNoNo95
703x54 5x61 Shared25.660417.5336NoNoYesNo99
715x58 5x61 Shared71.304636.8167YesYesYesNo99
725x65 6x30 Shared18.765117.9176NoNoNoYes87
735x65 6x33 Shared30.184519.1252NoNoNoNo88
741x50 2x50 Shared32.716815.6475YesNoYesYes99
753x29 Lig cb1_on2.8690718.7796NoNoYesYes40
763x25 3x29 cb1_on1.5127818.2291NoYesNoNo94
776x58 E2.D266 cb1_on8.1946219.5776YesNoNoYes44
786x58 E2.I267 cb1_on0.17072134.2266YesNoNoNo44
797x34 E2.I267 cb1_on026.0038NoYesNoNo44
802x65 Lig cb1_on014.0132NoYesYesYes40
811x35 2x61 cb1_on7.5591614.0772NoNoYesYes55
821x35 7x39 cb1_on011.6194NoNoNoNo55
831x46 7x46 cb1_on017.269YesYesNoNo79
842x50 7x46 cb1_on1.9395818.4212YesYesNoNo99
852x50 7x49 cb1_on019.4709YesYesNoNo99
865x43 6x48 cb1_on065.0139YesYesYesYes68
875x43 Lig cb1_on7.7014361.8135YesYesYesYes60
881x46 2x54 cb1_on1.4179411.5938YesYesNoYes77
892x39 2x40 cb1_on1.3088628.8713NoNoYesYes89
902x39 3x49 cb1_on029.8571NoNoNoNo89
912x42 3x49 cb1_on062.0098NoYesNoNo89
922x42 3x46 cb1_on070.6123NoYesNoNo89
933x46 3x50 cb1_on071.342NoNoNoNo99
943x50 7x53 cb1_on1.7404159.7269NoNoYesYes99
952x46 7x49 cb1_on080.5419YesYesNoNo99
961x56 8x57 cb1_on013.8724NoNoNoNo85
971x59 8x57 cb1_on016.6588NoNoNoNo55
981x59 I1x48 cb1_on1.3820.0981NoNoYesNo56
99I1x48 I1x51 cb1_on015.831YesNoNoYes68
1004x39 I1x51 cb1_on010.6465NoYesNoYes18
1012x38 4x39 cb1_on024.3226YesNoNoYes51
102I2x53 I2x57 cb1_on4.0925726.3793YesYesYesNo76
1033x49 I2x53 cb1_on0.0094845232.4899NoNoYesYes97
1041x60 I1x51 cb1_on010.9452NoNoNoYes68
1051x60 I1x50 cb1_on012.8952NoNoYesYes69
1062x40 I1x50 cb1_on8.8300813.578YesYesYesYes99
1072x42 3x45 cb1_on1.3752511.6322NoYesNoNo86
1084x60 5x39 cb1_on9.6931810.6038NoNoNoYes67
1095x39 Lig cb1_on027.5741NoYesYesYes70
1105x39 E2.W255 cb1_on013.2281NoYesNoYes75
1116x58 E3.M371 cb1_on013.0617YesNoNoYes41
1125x61 6x33 cb1_on020.1067YesNoNoNo98
113E2.D266 E3.K370 cb1_on010.2283NoYesNoNo41
1143x50 5x58 cb1_on0.19917512.1314NoNoYesYes99

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
E2.P269NT.F108Shared7.706674.332012
2x64NT.M109cb1_on3.7301012
1x352x61Shared2.933332.510021
2x572x61cb1_on10.3601111
2x57LigShared8.5112.091110
2x603x28Shared7.653.060012
2x60LigShared4.445.320010
2x612x65Shared6.7913.581011
2x61LigShared3.464.321010
2x642x65Shared10.55675.661011
2x64LigShared1110.361010
2x65Ligcb1_on7.5501010
3x25E2.P269Shared7.2210.112021
3x29E2.I271cb1_on3.3300012
3x29LigShared3.636673.920010
3x303x33cb1_on3.0333300021
3x323x36Shared3.493335.241111
3x32LigShared4.246673.171110
3x335x43Shared3.643.641111
3x33LigShared9.016673.131110
3x367x41Shared8.846675.591112
3x36LigShared4.756.041110
3x375x43Shared4.854.850021
4x605x39Shared6.486674.170021
E2.F268E2.I267Shared6.696676.281112
6x58E2.I267Shared7.4666715.391122
7x34E2.I267cb1_on3.3466701012
E2.F268E2.I271Shared5.442.511112
7x34E2.F268cb1_on2.8566701011
E2.F268LigShared14.2710.361110
E2.H270E2.P269cb1_on7.6266702721
5x39Ligcb1_on4.6166700010
5x405x44cb1_on3.3266700122
5x435x47Shared9.339.71112
5x436x48cb1_on3.4366701112
5x436x55cb1_on3.8766701112
5x43LigShared6.303333.231110
5x446x55Shared5.833334.370022
6x487x41Shared4.353333.920122
6x517x34Shared2.843332.440121
6x547x34cb1_on7.9533300021
6x557x34cb1_on3.3200021
7x34LigShared3.7419.861010
7x38Ligcb1_on3.6166701010
2x65NT.L111Shared35.141012
2x573x32Shared4.3710.491111
2x617x38cb1_on4.4066701011
2x64E1.H181cb1_on3.3933301012
3x253x29Shared3.653332.442021
3x25E2.H270cb1_on5.6566702022
5x39E2.W255cb1_on5.4666700012
6x486x51Shared4.173334.560122
2x64E1.R182cb1_on4.6333301012
2x563x32cb1_on2.5600521
5x395x42cb1_on2.4066700012
E1.H181NT.M109cb1_on_allo03.940022
1x392x61cb1_on_allo02.640021
2x577x38cb1_on_allo02.641111
2x643x25cb1_on_allo05.361012
4x615x39cb1_on_allo02.340021
E2.F268E2.S265cb1_on_allo05.281112
E2.I271E2.S265cb1_on_allo07.740122
5x40E2.F268cb1_on_allo04.870121
6x55E2.F268cb1_on_allo06.220021
6x58E2.F268cb1_on_allo02.391121
E2.P269Ligcb1_on_allo03.492010
5x39E2.I271cb1_on_allo04.840012
5x40E2.I271cb1_on_allo02.850122
5x406x58cb1_on_allo02.710122
5x435x44cb1_on_allo02.351112
6x517x41cb1_on_allo03.170122
E1.H181NT.L111cb1_on_allo01.290022

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
cb1_on_allo 7WV9-CB1-PubMed 104895-ZCZ011-Gi2/&β;1/&γ;2
cb1_on 8GHV-CB1-PubChem 145964903-Gi1/&β;1/&γ;2
6KPG-CB1-AM841-Gi1/&β;1/&γ;2
6N4B-CB1-MDMB-Fubinaca-Gi1/&β;1/&γ;2
Network Difference
Value cb1_on_allo cb1_on
Imin 2.33 2.70667
Number of Linked Nodes 270 282
Number of Specific Nodes 8 (2.96%) 20  (7.09%)
Number of Shared Nodes 262 (97.04%) 262  (92.91%)
Number of Links 298 320
Number of Specific Links 128 (42.95%) 150  (46.88%)
Number of Shared Links 170 (57.05%) 170  (53.13%)
Number of Hubs 37 41
Number of Specific Hubs 19 (51.35%) 23  (56.10%)
Number of Shared Hubs 18 (48.65%) 18  (43.90%)
Average % Shared Neighbours (Jaccard) 39.90
Average % Shared Neighbours (Otsuka) 49.56
Average % Shared Neighbours (Overlap Coefficient) 58.84
Average % Shared Cliques (k3-6) 79.07
Graphlets Similarity 0.626775
Paths Difference
Value cb1_on_allo cb1_on
Number Of Nodes in MetaPath 70 58
Specific Nodes in MetaPath 39 (55.71%) 27  (46.55%)
Shared Nodes in MetaPath 262 (97.04%) 262  (97.04%)
Number Of Links MetaPath 74 61
Specific Links in MetaPath 53 (71.62%) 40  (65.57%)
Shared Links in MetaPath 170 (57.05%) 170  (57.05%)
Number of Shortest Paths 48329 48236
Length Of Smallest Path 3 3
Average Path Length 14.1597 13.2571
Length of Longest Path 34 30
Minimum Path Strength 1.47 0.895
Average Path Strength 5.26877 4.60333
Maximum Path Strength 12.5867 12.7583
Minimum Path Correlation 0.7 0.7
Average Path Correlation 0.93398 0.918247
Maximum Path Correlation 0.99 0.99
Minimum % Of Corr. Nodes 4.54545 3.57143
Average % Of Corr. Nodes 52.5853 44.883
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 41.837 40.438
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download cb1_on_ortoallo.zip<



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.