Orange: nodes, hubs and links specific of cb2_on network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of cb2_off network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner cb2_on Avg Int. Strength cb2_off Avg Int. Strength cb2_on Num Of Links cb2_off Num Of Links ConSurf
1NT.M22 cb2_on2.2493312.44517
21x32 cb2_on2.716677.39435
31x42 cb2_on3.130335.54516
42x42 cb2_on5.235835.32333438
52x46 cb2_on3.969674.10667539
62x57 cb2_on5.826116.735626
72x65 cb2_on6.467926.89667434
83x34 cb2_on4.867924.60333435
93x36 cb2_on5.157677.13526
103x44 cb2_on2.891254.28426
113x56 cb2_on5.8743310.41525
124x46 cb2_on4.568756.33428
134x50 cb2_on4.4695.41333539
144x58 cb2_on4.707925.14333434
154x61 cb2_on2.829171.85333436
16E2.F183 cb2_on9.075339.59536
175x50 cb2_on3.360428.46427
185x51 cb2_on5.043.77537
195x73 cb2_on0.42250404
206x30 cb2_on5.043755.11437
216x55 cb2_on4.287924.39426
227x34 cb2_on5.952679.13524
237x47 cb2_on4.107924.69333436
247x52 cb2_on3.403753.07419
252x40 Shared6.678336.785688
262x51 Shared4.038332.94447
272x61 Shared5.870675.44556
282x64 Shared6.241676.6975543
292x66 Shared2.785.6375444
303x25 Shared4.340336.098559
313x49 Shared6.80256.9475449
32I2x53 Shared6.038757.58447
33E2.W172 Shared4.215337.172555
34E2.I186 Shared3.585674.154555
355x36 Shared4.844174.145444
365x39 Shared4.904447.83647
375x43 Shared7.471397.36645
385x58 Shared6.255565.686659
396x48 Shared5.967224.778658
407x53 Shared5.452384.595749
418x49 Shared4.6458.215446
42Lig Shared8.310126.6414170
43NT.P20 cb2_off03.635040
441x49 cb2_off3.519445.01348
452x50 cb2_off7.792225.985349
463x29 cb2_off5.428894.6075344
473x50 cb2_off6.007784.58167369
48E2.T173 cb2_off3.382.715145
49E2.R177 cb2_off4.0956.48343
505x68 cb2_off1.55.88247
516x28 cb2_off2.024.1625344
526x29 cb2_off2.647784.885345
53E3.L273 cb2_off4.010563.4625341
548x50 cb2_off4.358335.215348
   
Orange: nodes, hubs and links specific of cb2_on network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of cb2_off network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner cb2_on Recurrence cb2_off Recurrence cb2_on Hub1? cb2_off Hub1? cb2_on Hub2? cb2_off Hub2? ConSurf1 ConSurf2
17x32 NT.I27 cb2_on34.59176.15634NoNoNoNo25
27x32 NT.L28 cb2_on43.83940NoNoNoNo26
32x65 NT.L28 cb2_on62.09350YesNoNoNo46
42x64 2x65 cb2_on28.7844.8336YesYesYesNo34
51x31 NT.L28 cb2_on15.85510NoNoNoNo56
61x32 E1.H98 cb2_on14.91690YesNoNoNo54
71x31 7x36 cb2_on12.7010NoNoNoNo54
81x42 7x42 cb2_on23.17280YesNoNoNo66
92x57 7x42 cb2_on24.45940YesNoNoNo66
102x57 Lig cb2_on17.15061.94188YesNoYesYes60
112x61 2x65 cb2_on39.44344.55217YesYesYesNo64
121x42 7x47 cb2_on16.73960YesNoYesNo66
132x50 7x49 cb2_on25.16080NoYesNoNo99
147x45 7x49 cb2_on22.90920NoNoNoNo99
156x48 7x45 cb2_on26.1660YesYesNoNo89
163x36 6x48 cb2_on63.71071.46345YesNoYesYes68
173x36 Lig cb2_on51.59941.45641YesNoYesYes60
181x49 7x47 cb2_on13.34440.408077NoYesYesNo86
191x53 7x54 cb2_on10.47620NoNoNoNo98
207x54 8x50 cb2_on12.19170NoNoNoYes88
212x37 2x40 cb2_on36.68243.72194NoNoYesYes68
222x37 2x38 cb2_on61.97280NoNoNoNo65
232x38 I2x57 cb2_on63.38460NoNoNoNo56
243x49 I2x57 cb2_on64.84548.6048YesYesNoNo96
254x46 4x50 cb2_on64.75610YesNoYesNo89
263x34 4x50 cb2_on57.26860YesNoYesNo59
271x55 8x57 cb2_on16.78430NoNoNoNo50
281x56 8x57 cb2_on19.71050NoNoNoNo80
291x56 8x53 cb2_on26.35814.70696NoNoNoNo87
301x60 8x53 cb2_on29.6646.81067NoNoNoNo77
311x60 I1x50 cb2_on36.6024.72807NoNoNoNo78
322x40 I1x50 cb2_on20.26898.40779YesYesNoNo88
338x49 I1x50 cb2_on19.51840YesYesNoNo68
342x37 8x49 cb2_on23.89210.0492507NoNoYesYes66
354x39 4x43 cb2_on14.62210NoNoNoNo31
362x41 4x43 cb2_on16.14550.0211074NoNoNoNo41
372x41 4x42 cb2_on17.73140NoNoNoNo47
382x42 4x42 cb2_on19.40232.58918YesNoNoNo87
392x42 3x45 cb2_on10.77110YesNoNoNo86
402x45 3x42 cb2_on43.60268.91437NoNoNoNo98
412x46 3x42 cb2_on44.49160YesNoNoNo98
423x43 7x53 cb2_on45.49680NoNoYesYes89
432x60 Lig cb2_on11.07041.84338NoNoYesYes40
443x34 4x58 cb2_on14.22898.85809YesNoYesNo54
453x40 6x48 cb2_on21.26070NoNoYesYes88
463x40 5x50 cb2_on31.47346.02266NoNoYesNo87
473x44 5x50 cb2_on14.55950YesNoYesNo67
483x47 5x58 cb2_on15.06880NoNoYesYes99
495x58 7x53 cb2_on58.56860YesYesYesYes99
503x47 5x57 cb2_on13.92510NoNoNoNo96
513x49 I2x53 cb2_on14.76956.81067YesYesYesYes97
523x54 5x61 cb2_on39.59520NoNoNoNo99
535x61 6x37 cb2_on41.08740NoNoNoNo98
545x58 6x37 cb2_on45.4038.61183YesYesNoNo98
553x52 I2x53 cb2_on10.62810NoNoYesYes57
565x46 5x50 cb2_on11.39653.98931NoNoYesNo57
575x39 5x43 cb2_on22.86450YesYesYesYes75
585x39 E2.W172 cb2_on19.25938.55555YesYesYesYes75
595x40 E2.S180 cb2_on12.61620NoNoNoNo54
605x40 6x55 cb2_on15.11350NoNoYesNo56
615x43 6x55 cb2_on16.39560YesYesYesNo56
625x69 6x30 cb2_on11.57520NoNoYesNo57
635x69 6x29 cb2_on23.51680NoNoNoYes55
646x29 6x33 cb2_on35.28410NoYesNoNo57
653x54 6x33 cb2_on36.65560NoNoNoNo97
661x49 7x51 cb2_on10.76668.68923NoYesNoNo86
671x55 8x61 cb2_on10.09652.357NoNoNoNo50
685x68 6x29 cb2_on11.10170NoYesNoYes75
695x69 5x73 cb2_on10.93640NoNoYesNo54
702x57 2x61 cb2_on14.43890.0492507YesNoYesYes66
712x57 3x36 cb2_on16.57880YesNoYesNo66
722x46 7x53 cb2_on25.56740YesNoYesYes99
733x33 5x43 cb2_on10.73530.872441NoNoYesYes45
745x51 6x44 cb2_on15.09110YesNoNoNo79
753x40 5x51 cb2_on13.04068.04193NoNoYesNo87
762x64 NT.M26 Shared19.219124.2313YesYesNoNo36
77E1.H98 NT.M26 Shared17.79418.8489NoNoNoNo46
787x31 NT.I27 Shared31.491210.1949NoNoNoNo25
792x64 Lig Shared51.393942.5315YesYesYesYes30
802x61 Lig Shared29.847216.5834YesYesYesYes60
811x50 2x50 Shared22.006830.7957NoNoNoYes99
821x49 7x50 Shared12.973614.3882NoYesNoNo89
832x40 8x50 Shared13.661547.1188YesYesNoYes88
842x42 3x49 Shared75.174260.6628YesNoYesYes89
852x42 4x46 Shared10060.3884YesNoYesNo88
863x34 4x57 Shared59.037713.2062YesNoNoNo57
873x33 4x57 Shared59.256611.1658NoNoNoNo47
883x33 Lig Shared49.298611.785NoNoYesYes40
892x46 3x43 Shared12.164993.3512YesNoNoNo98
903x43 6x44 Shared57.822592.9572NoNoNoNo89
916x44 6x48 Shared43.178290.2976NoNoYesYes98
922x46 7x49 Shared28.140699.3386YesNoNoNo99
935x43 Lig Shared15.167172.1171YesYesYesYes50
943x37 5x43 Shared10.185864.9265NoNoYesYes65
953x37 4x53 Shared15.207368.4796NoNoNoNo68
963x38 4x53 Shared14.823167.8956NoNoNoNo78
975x47 5x51 Shared16.971912.0383NoNoYesNo77
985x43 5x47 Shared11.968414.0153YesYesNoNo57
993x51 5x57 Shared12.942326.525NoNoNoNo86
1003x51 3x55 Shared10.208223.6333NoNoNoNo86
101E2.I186 Lig Shared15.953442.6441YesYesYesYes50
1025x37 E2.S180 Shared10.109912.0242NoNoNoNo44
1037x31 E2.E181 Shared28.381912.1931NoNoNoNo24
1046x47 7x45 Shared15.077714.1349NoNoNoNo89
105E2.E181 E3.L273 Shared19.000216.1472NoNoNoYes41
1061x50 7x50 Shared13.107628.0377NoNoNoNo99
1072x45 4x46 Shared37.482160.1562NoNoYesNo98
1083x38 4x50 Shared14.787367.4734NoNoYesNo79
1093x29 Lig cb2_off4.5568317.2166NoYesYesYes40
110E2.F183 Lig cb2_off9.2789540.5826YesNoYesYes60
1115x39 Lig cb2_off026.4969YesYesYesYes70
1126x48 Lig cb2_off086.3576YesYesYesYes80
1132x64 3x25 cb2_off3.9715918.2298YesYesYesYes39
1143x25 E2.P184 cb2_off3.5248420.2561YesYesNoNo95
115E2.P184 NT.Y25 cb2_off2.6804917.3855NoNoNoNo54
116NT.P20 NT.Y25 cb2_off014.4797NoYesNoNo04
1173x25 3x29 cb2_off4.2709119.7003YesYesNoYes94
1185x36 E2.I186 cb2_off9.3638318.2298YesYesYesYes45
1195x36 E2.C174 cb2_off5.1688711.1236YesYesNoNo45
120NT.P20 NT.P21 cb2_off012.9529NoYesNoNo00
121E2.F183 E2.L182 cb2_off3.1227745.585YesNoNoNo64
1226x58 E2.L182 cb2_off2.9485331.4008NoNoNoNo34
1236x58 E3.L273 cb2_off029.5434NoNoNoYes31
1241x32 NT.L28 cb2_off015.1903YesNoNoNo56
125E1.H98 NT.L28 cb2_off017.0267NoNoNoNo46
1261x46 2x54 cb2_off1.85411.5598NoNoNoNo78
1271x46 7x46 cb2_off019.6581NoNoNoNo79
1282x50 7x46 cb2_off1.8361322.4161NoYesNoNo99
1292x46 2x50 cb2_off060.9794YesNoNoYes99
1301x53 7x50 cb2_off011.5598NoNoNoNo99
1318x50 8x53 cb2_off013.6073NoYesNoNo87
1327x53 8x50 cb2_off056.8634YesYesNoYes98
1336x40 7x53 cb2_off1.44746100NoNoYesYes89
1346x40 7x49 cb2_off099.606NoNoNoNo89
1352x43 7x53 cb2_off045.9931NoNoYesYes89
1362x40 2x43 cb2_off1.7646545.374YesYesNoNo88
1372x40 8x49 cb2_off0.13402433.0472YesYesYesYes86
1382x45 4x50 cb2_off6.6386762.8228NoNoYesNo99
1392x39 2x40 cb2_off038.2396NoNoYesYes88
1403x49 3x50 cb2_off061.9644YesYesNoYes99
1412x40 6x33 cb2_off038.2045YesYesNoNo87
1422x48 4x50 cb2_off019.5525NoNoYesNo79
1432x48 2x52 cb2_off017.4418NoNoNoNo77
1442x51 2x52 cb2_off011.004YesYesNoNo77
1453x25 E1.D101 cb2_off012.2634YesYesNoNo92
1464x60 E2.I186 cb2_off019.2007NoNoYesYes55
1474x60 E2.T173 cb2_off031.2109NoNoNoYes55
1484x60 5x39 cb2_off2.4839215.9643NoNoYesYes57
1493x26 E2.T173 cb2_off014.0083NoNoNoYes55
1503x50 5x61 cb2_off065.025NoYesNoNo99
1515x58 5x61 cb2_off062.3303YesYesNoNo99
1525x58 6x41 cb2_off3.3372146.1901YesYesNoNo97
1535x54 6x41 cb2_off040.7725NoNoNoNo87
1543x44 5x54 cb2_off2.926237.9512YesNoNoNo68
1553x50 6x30 cb2_off022.0291NoYesYesNo97
1563x44 3x48 cb2_off2.926235.1157YesNoNoNo66
1573x48 5x57 cb2_off029.4027NoNoNoNo66
1586x30 I3.M237 cb2_off1.6797717.9202YesNoNoNo74
1595x68 I3.M237 cb2_off014.9652NoYesNoNo74
160E2.I186 E2.S180 cb2_off013.9802YesYesNoNo54
1617x34 E2.L182 cb2_off2.595614.0083YesNoNoNo44
1625x37 6x59 cb2_off7.5947110.0542NoNoNoNo43
1633x55 5x64 cb2_off4.8650814.8737NoNoNoNo66
1646x29 8x49 cb2_off022.2332NoYesYesYes56
1656x28 6x29 cb2_off011.2854NoYesNoYes45
1666x36 7x53 cb2_off012.777NoNoYesYes89
1676x44 7x45 cb2_off016.9211NoNoNoNo99
1686x54 7x34 cb2_off3.3640112.1931NoNoYesNo44
1696x54 7x37 cb2_off1.6842410.1949NoNoNoNo44
1703x26 4x61 cb2_off1.6127610.5256NoNoYesNo56
1712x39 3x50 cb2_off036.0937NoNoNoYes89
1723x50 6x33 cb2_off036.2766NoYesNoNo97

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
2x57LigShared10.259.501671110
2x60LigShared3.163.7650010
2x61LigShared3.423.836671110
2x64LigShared6.8310.80330110
3x29LigShared56.571671110
3x32LigShared5.223.891670110
3x33LigShared5.1710.96671110
3x36LigShared10.253.998331110
E2.F183LigShared21.3526.88671110
E2.I186LigShared53.3451110
5x39Ligcb2_off3.2901110
5x43LigShared10.3813.51671110
6x48Ligcb2_off7.9801110
6x51Ligcb2_off3.1301010
6x55Ligcb2_off5.9500010
7x38LigShared3.167.333330110
7x41Ligcb2_off3.3401110
3x25NT.M22Shared12.443.318330122
E2.P184NT.Y25Shared23.6412.51670012
2x64NT.M26Shared9.956.011670112
1x352x61cb2_off3.9300021
1x392x61Shared4.193.260121
1x397x39Shared4.864.320122
2x572x61Shared3.225.5351111
2x612x65Shared12.4413.19831112
2x642x65Shared6.797.351670112
2x643x25Shared3.223.930112
3x253x29Shared3.776.280121
3x25E2.P184Shared8.675.5350121
3x29E2.F183cb2_off3.7701111
3x29E2.I186Shared5.893.4351111
3x334x57Shared6.45.063331112
3x335x43Shared4.854.646671111
3x366x48Shared4.017.6851111
3x374x57cb2_off3.200122
3x375x43Shared3.646.063330121
3x405x51Shared3.935.678330122
4x59E2.W172Shared5.694.1751022
4x595x39cb2_off5.8601021
4x60E2.I186cb2_off3.3900021
4x605x39Shared12.5212.2850021
5x39E2.W172Shared9.654.661671112
E2.I186E2.S180cb2_off3.101112
E2.F183E2.L182Shared3.654.2651112
7x34E2.L182Shared14.619.1350112
5x36E2.I186Shared3.393.953331121
5x435x47Shared10.5711.74331112
6x446x48Shared4.563.230121
6x447x45cb2_off5.4900122
6x486x52cb2_off3.4201112
6x487x41Shared3.927.403331111
6x517x41cb2_off3.4201011
6x547x34Shared3.655.481670021
5x446x55Shared2.835.180021
5x475x51Shared2.514.6050122
5x42E2.W172cb2_off2.4700022
NT.M22NT.Y25cb2_on03.191670122
2x64NT.M22cb2_on03.111670112
2x533x36cb2_on03.928330021
2x573x32cb2_on04.586671111
2x573x36cb2_on04.823331111
2x577x38cb2_on04.623331111
2x577x42cb2_on05.886671112
2x603x28cb2_on05.8650012
2x617x39cb2_on03.523331112
3x367x41cb2_on05.353331111
3x406x48cb2_on03.0650121
5x36E2.W172cb2_on08.331671122
5x40E2.S180cb2_on030022
E2.F183E2.I186cb2_on03.768331111
6x55E2.F183cb2_on04.561670011
7x34E2.F183cb2_on05.8950111
E2.P184Ligcb2_on05.511670010
5x39E2.I186cb2_on03.426671111
5x365x39cb2_on03.011671121
5x395x43cb2_on04.981671111
5x406x55cb2_on03.533330021
5x436x55cb2_on03.876671111
5x516x44cb2_on04.261670122
5x516x48cb2_on08.016670121
6x487x45cb2_on06.403331112
7x34Ligcb2_on06.413330110
3x375x47cb2_on03.293330122
6x517x34cb2_on02.838331011
5x516x52cb2_on02.638330122
5x395x42cb2_on01.061112

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
cb2_off 5ZTY-CB2-AM10257
cb2_on 8GUR-CB2-CP55,940-Gi1/β1/γ2
8GUS-CB2-HU-308-Gi1/β1/γ2
8GUT-CB2-LEI-102-Gi1/β1/γ2
6KPF-CB2-PubChem 145915889-Gi1/β1/γ2
6PT0-CB2-WIN 55212-2-Gi1/β1/γ2
8GUQ-CB2-Olorinab-Gi1/β1/γ2
Network Difference
Value cb2_on cb2_off
Imin 2.97667 3.07
Number of Linked Nodes 290 259
Number of Specific Nodes 37 (12.76%) 6  (2.32%)
Number of Shared Nodes 253 (87.24%) 253  (97.68%)
Number of Links 328 282
Number of Specific Links 157 (47.87%) 111  (39.36%)
Number of Shared Links 171 (52.13%) 171  (60.64%)
Number of Hubs 42 30
Number of Specific Hubs 24 (57.14%) 12  (40.00%)
Number of Shared Hubs 18 (42.86%) 18  (60.00%)
Average % Shared Neighbours (Jaccard) 41.46
Average % Shared Neighbours (Otsuka) 50.78
Average % Shared Neighbours (Overlap Coefficient) 61.06
Average % Shared Cliques (k3-6) 53.05
Graphlets Similarity 0.583736
Paths Difference
Value cb2_on cb2_off
Number Of Nodes in MetaPath 97 93
Specific Nodes in MetaPath 41 (42.27%) 37  (39.78%)
Shared Nodes in MetaPath 253 (87.24%) 253  (87.24%)
Number Of Links MetaPath 108 97
Specific Links in MetaPath 75 (69.44%) 64  (65.98%)
Shared Links in MetaPath 171 (52.13%) 171  (52.13%)
Number of Shortest Paths 66499 45292
Length Of Smallest Path 3 3
Average Path Length 13.4414 13.2671
Length of Longest Path 32 34
Minimum Path Strength 0.29 1.14
Average Path Strength 5.01772 5.49203
Maximum Path Strength 17.3822 16.465
Minimum Path Correlation 0.7 0.7
Average Path Correlation 0.92603 0.925415
Maximum Path Correlation 0.99 0.99
Minimum % Of Corr. Nodes 3.57143 4.34783
Average % Of Corr. Nodes 48.8459 50.8221
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 42.0336 34.2653
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download cb2_off_on.zip<



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