Orange: nodes, hubs and links specific of mop_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of mop_on network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner mop_off Avg Int. Strength mop_on Avg Int. Strength mop_off Num Of Links mop_on Num Of Links ConSurf
11x36 mop_off00435
21x42 mop_off00417
31x50 mop_off015.3846439
41x60 mop_off33.33330535
56x32 mop_off33.33330437
66x44 mop_off10023.0769529
7E3 mop_off015.3846512
87x45 mop_off33.333353.8462639
9Lig Shared10010018160
102x42 Shared66.666792.3077567
112x57 Shared00447
12E1x50 Shared66.6667100668
13E1x52 Shared66.666784.6154557
143x34 Shared66.666769.2308454
153x51 Shared66.666776.9231548
16I2x57 Shared33.33330446
174x50 Shared66.666761.5385449
18E2 Shared10010012134
195x47 Shared66.666738.4615448
205x58 Shared33.333384.6154559
21I3 Shared33.333346.1538554
226x48 Shared66.6667100478
236x49 Shared07.69231445
247x34 Shared66.666792.3077545
257x42 Shared66.666761.5385547
267x49 Shared069.2308459
277x53 Shared66.6667100559
288x50 Shared66.666761.5385459
291x35 mop_on33.33330344
301x39 mop_on33.333338.4615347
311x53 mop_on00149
322x44 mop_on07.69231346
332x46 mop_on046.1538149
342x50 mop_on0100359
352x64 mop_on07.69231345
363x32 mop_on038.4615246
373x37 mop_on33.333338.4615357
383x38 mop_on038.4615347
395x44 mop_on046.1538345
406x52 mop_on030.7692348
417x35 mop_on053.8462244
   
Orange: nodes, hubs and links specific of mop_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of mop_on network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner mop_off Recurrence mop_on Recurrence mop_off Hub1? mop_on Hub1? mop_off Hub2? mop_on Hub2? ConSurf1 ConSurf2
12x58 2x61 mop_off10.91620NoNoNoNo86
21x43 2x58 mop_off12.42822.02515NoNoNoNo68
31x42 2x57 mop_off13.91592.02515YesNoYesYes77
42x56 3x28 mop_off11.87780NoNoNoNo65
52x60 3x28 mop_off13.08130NoNoNoNo65
62x60 Lig mop_off13.32931.7852NoNoYesYes60
73x36 6x48 mop_off1003.46003NoNoYesYes78
81x60 8x53 mop_off26.44690YesNoNoNo55
98x53 I1x50 mop_off29.16840NoNoNoNo57
102x40 I1x50 mop_off29.12610NoNoNoNo87
112x37 2x40 mop_off45.47326.97764NoNoNoNo88
122x37 2x39 mop_off46.65860NoNoNoNo88
132x39 6x33 mop_off47.80770NoNoNoNo87
143x50 6x33 mop_off60.56240NoNoNoNo97
153x50 6x37 mop_off62.44930NoNoNoNo97
163x46 6x37 mop_off63.32630NoNoNoNo87
172x42 4x42 mop_off71.53314.65976YesYesNoNo77
182x41 4x42 mop_off72.4040NoNoNoNo67
192x41 4x46 mop_off74.10954.65976NoNoNoNo67
202x45 3x42 mop_off71.18230NoNoNoNo97
213x42 4x49 mop_off71.87180NoNoNoNo77
223x40 3x41 mop_off87.28150NoNoNoNo86
233x40 6x44 mop_off90.24490NoNoYesNo89
243x38 4x49 mop_off13.50470NoYesNoNo77
253x38 4x50 mop_off12.13796.84807NoYesYesYes79
26E1x50 E2 mop_off17.79260YesYesYesYes84
27E2 Lig mop_off38.71790YesYesYesYes40
287x34 Lig mop_off13.29910YesYesYesYes50
293x43 6x44 mop_off49.01120NoNoYesNo89
303x43 6x41 mop_off47.86210NoNoNoNo88
315x54 6x41 mop_off46.70090NoNoNoNo88
325x54 5x58 mop_off44.14270NoNoYesYes89
333x51 5x61 mop_off26.16870YesYesNoNo88
341x60 I1x48 mop_off13.80710YesNoNoNo56
35I1x48 I1x51 mop_off12.31930NoNoNoNo66
365x44 5x47 mop_off12.33140.340724NoYesYesYes58
376x32 8x48 mop_off10.62596.56013YesNoNoNo74
385x65 I3 mop_off10.887.88943NoNoYesYes84
393x36 6x52 mop_off17.3450NoNoNoYes78
406x44 7x45 mop_off15.92980YesNoYesNo99
411x43 2x57 Shared13.92819.8628NoNoYesYes67
422x57 7x42 Shared26.852122.1374YesYesYesYes77
432x50 7x49 Shared12.331417.732NoYesYesYes99
447x45 7x49 Shared20.840662.0357YesNoYesYes99
456x48 7x45 Shared14.321162.3956YesYesYesNo89
463x36 Lig Shared82.255839.3464NoNoYesYes70
472x42 3x46 Shared64.330268.5478YesYesNoNo78
482x45 4x46 Shared74.944194.3133NoNoNoNo97
493x41 4x49 Shared86.011574.4169NoNoNoNo67
506x44 6x48 Shared86.096227.7762YesNoYesYes98
512x40 8x50 Shared15.137613.8641NoNoYesYes89
523x34 4x50 Shared10.831620.5538YesYesYesYes49
535x58 5x61 Shared40.659227.2387YesYesNoNo98
543x54 5x61 Shared15.004526.0726NoNoNoNo88
555x35 E2 Shared10.353814.0752NoNoYesYes34
566x52 Lig Shared10.517110.932NoYesYesYes80
575x47 6x52 Shared26.664616.062YesYesNoYes88
585x47 6x49 Shared10.831612.434YesYesYesYes85
596x29 6x33 Shared16.552815.5677NoNoNoNo57
606x29 6x32 Shared15.089214.3104NoNoYesNo57
613x54 5x65 Shared12.367725.0072NoNoNoNo88
627x42 Lig Shared31.200523.1596YesYesYesYes70
631x35 7x35 mop_on022.6269NoYesNoYes44
641x39 7x35 mop_on023.5531NoYesNoYes74
651x39 7x38 mop_on032.959NoYesNoNo75
667x38 Lig mop_on1.3728569.2437NoNoYesYes50
677x34 7x35 mop_on5.3885722.6893YesYesNoYes54
687x34 7x38 mop_on0.078621136.1887YesYesNoNo55
691x39 2x61 mop_on010.1449NoYesNoNo76
701x46 2x54 mop_on0.85273710.0489NoNoNoNo86
711x47 2x54 mop_on3.1871812.0309NoNoNoNo66
721x43 1x47 mop_on015.966NoNoNoNo66
731x50 2x50 mop_on9.3196214.248YesNoNoYes99
746x48 Lig mop_on072.1854YesYesYesYes80
751x50 7x50 mop_on4.7112211.743YesNoNoNo99
761x53 7x50 mop_on010.4761NoYesNoNo99
771x54 2x48 mop_on052.0875NoNoNoNo76
782x48 4x50 mop_on3.1508966.6331NoNoYesYes69
792x45 4x50 mop_on4.6991292.3985NoNoYesYes99
802x42 4x46 mop_on0100YesYesNoNo77
812x42 3x45 mop_on1.5784773.006YesYesNoNo77
823x45 4x49 mop_on073.6731NoNoNoNo77
833x37 3x41 mop_on077.6994NoYesNoNo76
843x36 3x37 mop_on042.2545NoNoNoYes77
853x37 5x43 mop_on4.7112239.2792NoYesNoNo75
865x43 Lig mop_on6.0901139.7351NoNoYesYes50
873x46 7x53 mop_on069.0085NoNoYesYes89
887x49 7x53 mop_on5.987359.5595YesYesYesYes99
891x54 2x44 mop_on1.5784749.9712NoNoNoYes76
901x56 1x60 mop_on012.8371NoNoYesNo75
911x56 8x50 mop_on017.4009NoNoYesYes79
921x57 8x50 mop_on6.2594541.4003NoNoYesYes79
931x57 2x44 mop_on4.7112243.5646NoNoNoYes76
942x42 3x49 mop_on7.5960127.3827YesYesNoNo78
952x48 2x52 mop_on1.5784713.8737NoNoNoNo67
962x52 3x35 mop_on011.5846NoNoNoNo78
97E1x50 E1x52 mop_on9.3559114.0369YesYesYesYes87
982x63 E1x50 mop_on1.5845268.1975NoNoYesYes68
992x63 Lig mop_on069.6996NoNoYesYes60
1003x25 E2 mop_on045.3642NoNoYesYes94
1013x25 E1x50 mop_on1.5724247.0967NoNoYesYes98
1023x47 5x54 mop_on1.3788926.6436NoNoNoNo98
1035x54 6x44 mop_on026.8404NoNoYesNo89
1043x47 5x57 mop_on012.9571NoNoNoNo97
1053x47 5x58 mop_on0.19352925.9766NoNoYesYes99
1063x51 5x57 mop_on9.3196211.6902YesYesNoNo87
1073x49 I2x56 mop_on016.1532NoNoNoNo84
1084x41 4x45 mop_on013.8737NoNoNoNo45
1092x42 4x45 mop_on1.5784716.1532YesYesNoNo75
1105x34 5x35 mop_on8.835812.0933NoNoNoNo33
1115x34 5x38 mop_on1.5845210.1449NoNoNoNo34
1125x65 6x33 mop_on016.6571NoNoNoNo87
1136x54 7x34 mop_on5.975212.1029NoNoYesYes45
1143x34 4x54 mop_on3.1508913.8449YesYesNoNo43
1152x64 7x35 mop_on3.9854918.5382NoYesNoYes54
1161x31 1x35 mop_on1.5966111.4166NoNoNoYes34
1171x32 2x64 mop_on2.9936511.4262NoNoNoYes45
1186x48 6x52 mop_on014.3104YesYesNoYes88
1193x50 7x53 mop_on021.0673NoNoYesYes99
1203x50 5x58 mop_on020.2419NoNoYesYes99

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
3x32LigShared15.036712.33621110
3x33LigShared6.436679.196151110
3x36LigShared7.763337.784611110
5x36Ligmop_off4.2901110
5x40Ligmop_off9.2166701010
5x43LigShared4.626674.500771110
6x51LigShared5.196674.614620110
6x52LigShared4.163333.872311110
6x55LigShared16.16674.363851010
7x34Ligmop_off5.1233301010
7x38LigShared3.386675.816151110
7x42LigShared5.997.944621110
1x392x57Shared10.94334.958461022
1x397x42mop_off3.6401021
2x563x28mop_off4.7600022
2x577x42Shared7.426679.287691021
2x607x42Shared8.266676.937691111
2x63E1x50Shared10.54677.475390112
E1x49E2Shared9.896.934621021
3x25E1x50Shared3.485.826151122
E1x50E2x50Shared8.2714.56541122
3x22E2Shared11.69678.383851121
3x25E2x50Shared7.286.861122
3x327x42Shared7.283337.960771111
3x334x60Shared8.415.630771112
3x366x48Shared6.595.369231111
3x366x52mop_off3.5033301111
3x375x43Shared5.244.939230021
3x406x44mop_off4.6066700022
E2E2Shared44.666739.00541111
E2E2x51Shared135.936921112
E2E2x52Shared4.463333.558461111
5x35E2Shared9.283338.106921121
5x36E2Shared12.058.436921111
5x365x40Shared5.46.438461111
5x406x55mop_off4.5533301011
5x476x52Shared15.849.573080121
6x446x48Shared16.03338.405391021
6x447x45mop_off6.0401022
6x487x45Shared3.766679.041112
6x547x34Shared7.393337.866150021
6x547x37mop_off4.4800022
6x587x30mop_off4.9733300022
6x587x34Shared8.8933310.70850021
E3E3mop_off3.3866701011
7x30E3Shared7.5833314.43851021
7x347x35Shared5.293334.476151012
7x347x38Shared6.266676.866921011
2x60LigShared6.2513.46081110
E2x52Ligmop_off6.0133301010
E2Ligmop_off19.5201110
E3Ligmop_off6.1301010
6x487x41Shared3.283332.380771112
3x29E2x50mop_off3.2700112
5x445x47Shared3.216673.874620122
3x335x39mop_off3.1233301112
E1x50E2mop_off2.7766701121
4x63E2Shared2.576673.561541021
2x603x28mop_off2.3866701112
5x32E2Shared2.212.656150021
7x31E3mop_off1.8801021
5x376x59mop_off1.5633300022
2x63Ligmop_on03.801540110
3x29Ligmop_on05.131540110
1x397x35mop_on011.39231022
1x397x38mop_on06.786921021
2x563x32mop_on05.338460021
2x603x32mop_on03.616151111
3x363x37mop_on03.636151112
3x406x48mop_on06.596150021
5x31E2mop_on03.559230121
5x446x52mop_on05.050770121
6x486x52mop_on06.428461111
6x517x37mop_on03.523080112
6x547x30mop_on05.290022
6x48Ligmop_on03.621541110
3x28E1x50mop_on03.866920022
5x39E2mop_on03.465380021
5x406x59mop_on03.458461012
3x25E2mop_on03.381121
3x294x64mop_on02.748460112
5x375x40mop_on01.40021
LigNTmop_on00.2738461101

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
mop_off 4DKL-μ-β-Funaltrexamine
8QOT-μ-Nanobody-E
7UL4-μ-Alvimopan
mop_on 8F7R-μ-Endomorphin-Gi1/β1/γ2
8EF5-μ-Fentanyl-Gi1/β1/γ2
7SCG-μ-FH210-Gi1/β1/γ2
7T2H-μ-Lofentanil-Gi1/β1/γ2
7T2G-μ-Mitragynine Pseudoindoxyl-Gi1/β1/γ2
8EF6-μ-Morphine-Gi1/β1/γ2
8EFB-μ-Oliceridine-Gi1/β1/γ2
7U2L-μ-PubChem 163201242-Gi1/β1/γ2
8EFO-μ-PZM21-Gi1/β1/γ2
8EFL-μ-SR17018-Gi1/β1/γ2
8F7Q-μ-β-Endorphin-Gi1/β1/γ2
7U2K-μ-C6-guano-Gi1/β1/γ2
8EFQ-μ-Damgo-Gi1/β1/γ2
Network Difference
Value mop_off mop_on
Imin 3.28667 3.49231
Number of Linked Nodes 264 266
Number of Specific Nodes 2 (0.76%) 4  (1.50%)
Number of Shared Nodes 262 (99.24%) 262  (98.50%)
Number of Links 286 287
Number of Specific Links 106 (37.06%) 107  (37.28%)
Number of Shared Links 180 (62.94%) 180  (62.72%)
Number of Hubs 28 33
Number of Specific Hubs 8 (28.57%) 13  (39.39%)
Number of Shared Hubs 20 (71.43%) 20  (60.61%)
Average % Shared Neighbours (Jaccard) 50.36
Average % Shared Neighbours (Otsuka) 59.81
Average % Shared Neighbours (Overlap Coefficient) 69.28
Average % Shared Cliques (k3-6) 52.88
Graphlets Similarity 0.482277
Paths Difference
Value mop_off mop_on
Number Of Nodes in MetaPath 61 76
Specific Nodes in MetaPath 22 (36.07%) 37  (48.68%)
Shared Nodes in MetaPath 262 (99.24%) 262  (99.24%)
Number Of Links MetaPath 62 80
Specific Links in MetaPath 40 (64.52%) 58  (72.50%)
Shared Links in MetaPath 180 (62.94%) 180  (62.94%)
Number of Shortest Paths 33361 53506
Length Of Smallest Path 3 3
Average Path Length 15.1553 13.7756
Length of Longest Path 39 30
Minimum Path Strength 0.51 0.53
Average Path Strength 6.07978 5.695
Maximum Path Strength 14.99 16.0323
Minimum Path Correlation 0.706667 0.703077
Average Path Correlation 0.929468 0.920443
Maximum Path Correlation 0.99 0.99
Minimum % Of Corr. Nodes 3.22581 4
Average % Of Corr. Nodes 48.1602 44.3834
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 32.2605 39.7868
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download mop_off_on.zip<



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.