Orange: nodes, hubs and links specific of orexin_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of orexin_on network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner orexin_off Avg Int. Strength orexin_on Avg Int. Strength orexin_off Num Of Links orexin_on Num Of Links ConSurf
1NT orexin_off500725
21x52 orexin_off00426
32x551 orexin_off00415
43x32 orexin_off250437
53x38 orexin_off41.666733.3333437
63x52 orexin_off00534
73x54 orexin_off00418
83x56 orexin_off500436
9I2x53 orexin_off00407
104x57 orexin_off033.3333437
115x40 orexin_off250436
125x43 orexin_off79.16670435
135x66 orexin_off12.50425
146x37 orexin_off00428
156x44 orexin_off50100439
167x34 orexin_off37.533.3333434
177x45 orexin_off29.16670539
188x53 orexin_off00437
191x39 Shared10066.6667657
201x50 Shared033.3333449
212x42 Shared83.333366.6667558
222x57 Shared95.833333.3333447
23E1x50 Shared10066.6667647
243x51 Shared100100558
254x61 Shared5033.3333446
26E2 Shared1001001193
27E2x52 Shared100100564
285x39 Shared83.333333.3333558
295x47 Shared70.833366.6667448
305x58 Shared0100469
316x48 Shared62.566.6667447
326x59 Shared91.666733.3333444
336x60 Shared00445
34E3 Shared100100773
357x39 Shared750555
367x42 Shared100100567
377x53 Shared62.5100559
388x50 Shared10033.3333548
39Lig Shared1001009140
401x60 orexin_on00356
41I1x50 orexin_on29.166733.3333348
422x46 orexin_on033.3333249
432x50 orexin_on41.666766.6667259
442x56 orexin_on250347
453x24 orexin_on00145
463x30 orexin_on00356
47I2 orexin_on066.6667255
485x44 orexin_on12.533.3333346
496x38 orexin_on00246
506x51 orexin_on033.3333247
517x38 orexin_on70.833366.6667345
527x49 orexin_on37.533.3333349
538x54 orexin_on00357
   
Orange: nodes, hubs and links specific of orexin_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of orexin_on network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner orexin_off Recurrence orexin_on Recurrence orexin_off Hub1? orexin_on Hub1? orexin_off Hub2? orexin_on Hub2? ConSurf1 ConSurf2
11x39 2x60 orexin_off50.94780YesYesNoNo77
2E2 NT orexin_off27.07370YesYesYesNo35
35x39 5x43 orexin_off35.47650YesYesYesNo85
41x53 7x53 orexin_off11.84420NoNoYesYes99
57x49 7x53 orexin_off83.09510NoYesYesYes99
63x36 6x48 orexin_off99.20980NoNoYesYes67
73x36 Lig orexin_off1002.22868NoNoYesYes60
81x57 2x40 orexin_off16.47740NoNoNoNo79
92x40 8x50 orexin_off19.12430NoNoYesYes98
107x53 8x50 orexin_off58.9490YesYesYesYes98
111x57 2x44 orexin_off15.02222.04094NoNoNoNo76
121x54 1x58 orexin_off10.60490NoNoNoNo63
131x54 2x44 orexin_off13.55840NoNoNoNo66
143x49 3x50 orexin_off30.86490NoNoNoNo99
152x39 3x50 orexin_off32.98930NoNoNoNo89
162x39 6x37 orexin_off34.03430NoNoYesNo88
173x46 6x37 orexin_off58.11130NoNoYesNo88
182x42 3x45 orexin_off59.09158.51502YesYesNoNo86
193x45 4x49 orexin_off59.71335.68677NoNoNoNo66
203x38 4x49 orexin_off61.22890YesNoNoNo76
213x38 4x53 orexin_off66.69114.98425YesNoNoNo78
223x37 4x53 orexin_off67.39932.49516NoNoNoNo78
233x37 4x56 orexin_off68.09880NoNoNoNo75
244x57 5x43 orexin_off72.83569.41134YesNoYesNo75
253x25 E1x50 orexin_off20.54062.1439NoNoYesYes97
263x25 E2 orexin_off25.48470NoNoYesYes93
275x58 6x37 orexin_off28.59369.41739YesYesYesNo98
283x52 I2x53 orexin_off11.03240YesNoYesNo47
294x41 I2x53 orexin_off23.13140NoNoYesNo77
303x54 5x61 orexin_off18.41181.78658YesNoNoNo89
315x58 5x61 orexin_off19.57773.79118YesYesNoNo99
325x35 E2 orexin_off10.60064.04554NoNoYesYes33
337x39 7x40 orexin_off25.41130YesYesNoNo58
346x36 7x53 orexin_off20.25990NoNoYesYes89
356x36 7x56 orexin_off18.87395.86846NoNoNoNo87
362x67 NT orexin_off10.07820NoNoYesNo45
377x54 8x54 orexin_off10.60490NoNoNoYes77
388x50 8x54 orexin_off27.32410YesYesNoYes87
391x52 8x58 orexin_off10.10840YesNoNoNo65
401x52 8x54 orexin_off15.99386.1531YesNoNoYes67
416x35 7x56 orexin_off17.49640NoNoNoNo87
426x28 6x32 orexin_off14.6120NoNoNoNo58
436x32 6x35 orexin_off16.05862.07122NoNoNoNo88
446x24 6x28 orexin_off10.36310NoNoNoNo05
457x34 7x38 orexin_off10.47110YesNoNoYes45
461x39 7x39 Shared38.32261.64YesYesYesYes75
472x60 Lig Shared60.943924.5216NoNoYesYes70
484x61 Lig Shared45.589266.0853YesYesYesYes60
494x61 E2x52 Shared24.051128.5913YesYesYesYes64
50E2 E2x52 Shared21.261719.5918YesYesYesYes34
514x61 5x39 Shared22.483737.4576YesYesYesYes68
525x39 E2 Shared50.144719.0952YesYesYesYes83
535x43 Lig Shared83.142613.3539YesNoYesYes50
542x57 7x42 Shared15.514521.4935YesYesYesYes77
553x32 Lig Shared20.320431.1652YesNoYesYes70
561x43 2x57 Shared16.058619.18NoNoYesYes67
571x53 2x47 Shared10.604967.9506NoNoNoNo99
587x45 7x49 Shared89.192145.5911YesNoNoYes99
596x48 7x45 Shared89.351946.548YesYesYesNo79
601x60 I1x50 Shared12.08616.1701NoYesNoYes68
618x50 I1x50 Shared15.022226.0296YesYesNoYes88
622x42 3x46 Shared58.936183.0184YesYesNoNo88
634x56 4x57 Shared72.114516.2003NoNoYesNo57
647x38 Lig Shared14.555924.679NoYesYesYes50
654x41 I2 Shared26.499422.0385NoNoNoYes75
663x49 I2 Shared27.604862.827NoNoNoYes95
675x44 5x47 Shared11.636928.4096NoYesYesYes68
685x47 6x49 Shared20.005237.5908YesYesNoNo86
696x49 6x50 Shared21.369742.0724NoNoNoNo69
706x50 7x40 Shared22.725544.2951NoNoNoNo98
711x35 7x35 orexin_on013.0814NoNoNoNo54
721x39 7x35 orexin_on017.2783YesYesNoNo74
731x39 7x42 orexin_on1.4637981.9525YesYesYesYes77
741x43 1x47 orexin_on4.0243512.0761NoNoNoNo66
752x56 7x42 orexin_on1.0838121.4692NoYesYesYes77
762x53 2x56 orexin_on051.4898NoNoNoYes77
772x53 7x46 orexin_on051.6897NoNoNoNo79
782x50 7x46 orexin_on1.537251.9985NoYesNoNo99
791x50 2x50 orexin_on3.0700879.1303YesYesNoYes99
801x50 2x47 orexin_on9.1152572.8319YesYesNoNo99
811x53 7x54 orexin_on066.2851NoNoNoNo97
827x54 8x50 orexin_on058.085NoNoYesYes78
831x60 8x57 orexin_on010.2592NoYesNoNo66
847x41 7x42 orexin_on039.8014NoNoYesYes77
856x48 7x41 orexin_on1.5372100YesYesNoNo77
866x44 6x48 orexin_on8.2473352.6163YesNoYesYes97
875x54 6x44 orexin_on054.1546NoNoYesNo89
885x54 5x58 orexin_on053.3127NoNoYesYes89
893x50 5x58 orexin_on052.7313NoNoYesYes99
903x46 3x50 orexin_on033.6785NoNoNoNo89
913x43 7x49 orexin_on053.8093NoNoNoYes99
923x43 7x53 orexin_on077.0409NoNoYesYes99
933x46 7x53 orexin_on051.7563NoNoYesYes89
942x46 2x50 orexin_on031.0804NoYesNoYes99
952x46 3x42 orexin_on019.6645NoYesNoNo97
962x45 3x42 orexin_on1.5242517.2481NoNoNoNo97
972x45 4x50 orexin_on3.5493812.3789NoNoNoNo99
982x56 3x32 orexin_on7.6903132.6672NoYesYesNo77
992x60 7x42 orexin_on8.9511625.4663NoNoYesYes77
1007x38 7x42 orexin_on026.2536NoYesYesYes57
101E1x49 E2 orexin_on019.5312NoNoYesYes53
1022x66 E1x49 orexin_on2.6555612.1124NoNoNoNo55
1033x29 Lig orexin_on3.0700821.3542NoNoYesYes50
1043x28 3x29 orexin_on018.962NoNoNoNo55
1053x24 3x28 orexin_on2.6598716.9029NoYesNoNo55
1063x24 E1x52 orexin_on010.6529NoYesNoNo56
1074x60 5x39 orexin_on5.9415314.656NoNoYesYes68
1084x59 4x60 orexin_on3.9682212.6393NoNoNoNo56
1093x30 4x59 orexin_on010.562NoYesNoNo65
1103x33 Lig orexin_on011.4038NoNoYesYes60
1113x33 4x57 orexin_on2.4094310.6044NoNoYesNo67
1122x42 3x49 orexin_on065.3888YesYesNoNo89
1133x52 I2 orexin_on022.7471YesNoNoYes45
1143x51 3x52 orexin_on7.4312420.585YesYesYesNo84
1153x51 3x55 orexin_on2.4914712.2759YesYesNoNo87
116I2 I2x52 orexin_on010.6468NoYesNoNo55
1174x38 4x41 orexin_on2.5778319.8341NoNoNoNo57
1184x38 4x40 orexin_on1.2910717.0361NoNoNoNo55
1194x40 4x44 orexin_on014.226NoNoNoNo53
1204x43 4x44 orexin_on1.537211.4038NoNoNoNo43
121E3 Lig orexin_on025.9569YesYesYesYes30
1227x36 7x39 orexin_on048.704NoNoYesYes45
1237x36 7x40 orexin_on1.4810746.5056NoNoNoNo48
1245x44 6x56 orexin_on7.3362416.8241NoYesNoNo66
1256x56 6x60 orexin_on5.885414.4562NoNoYesYes65
1265x58 6x41 orexin_on032.0736YesYesNoNo98
1276x38 6x41 orexin_on028.4581NoYesNoNo68
1285x62 6x38 orexin_on019.0831NoNoNoYes66
1295x62 5x66 orexin_on1.2910715.2616NoNoYesNo65
1305x66 6x31 orexin_on3.8559513.3236YesNoNoNo55
1317x55 8x50 orexin_on031.0925NoNoYesYes58
1327x51 7x55 orexin_on1.537211.9549NoNoNoNo65
1336x51 7x41 orexin_on061.4341NoYesNoNo77
1347x55 8x54 orexin_on017.8537NoNoNoYes57
1351x33 1x35 orexin_on010.7134NoNoNoNo45
1362x46 3x43 orexin_on3.0700824.4852NoYesNoNo99
1372x50 7x49 orexin_on025.1696NoYesNoYes99
1383x50 7x53 orexin_on019.1134NoNoYesYes99
1396x51 Lig orexin_on3.0700858.9147NoYesYesYes70

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
1x392x60orexin_off5.0441702121
1x397x42Shared4.964174.32122
2x563x32Shared6.610427.122021
2x567x42Shared3.86256.272022
2x607x42Shared9.548337.073332112
2x60LigShared6.3754.276672110
2x647x38orexin_off9.4520800021
2x677x31Shared11.270811.22331021
3x28E1x50orexin_off4.600022
3x294x65Shared8.318333.913330012
3x29LigShared12.95833.863330010
3x327x42orexin_off7.3279202012
3x32LigShared16.282115.29672010
3x334x57Shared8.019178.026670112
3x334x61Shared4.862926.140111
3x366x48orexin_off5.8370800012
3x36LigShared3.8566710.57330010
4x575x43Shared5.1854.980021
4x61E2x52Shared6.849174.246670112
4x615x39Shared9.630833.756670112
4x61LigShared7.099173.370110
5x40E2x52Shared9.33759.031122
5x395x40Shared7.214174.716671122
5x395x43orexin_off4.2979201121
5x406x55orexin_off4.3570801121
5x435x461Shared13.72623.890012
5x43LigShared9.857086.406670010
6x487x41Shared8.777924.203334522
6x517x37Shared5.546674.130112
6x51LigShared12.34585.706670110
6x55LigShared10.69259.913330010
6x57E3Shared11.55173.981021
6x58E3Shared3.784584.133331121
6x587x34Shared4.547924.961122
E3E3Shared13.87379.361111
7x30E3Shared9.576259.270121
7x34E3orexin_off4.3329201021
7x277x31Shared8.916676.860111
7x347x38orexin_off3.8633301021
7x38LigShared13.13297.786670110
2x533x32orexin_off3.5112500021
7x26E3Shared3.317921.446671121
2x63E1x50orexin_off2.4500012
7x287x31orexin_off0.74791700021
2x607x38orexin_on08.216672111
2x63Ligorexin_on05.056670010
3x283x29orexin_on03.953330021
3x33Ligorexin_on05.166670110
4x65E2x52orexin_on03.610022
6x517x38orexin_on05.303330111
6x517x41orexin_on03.586670112
7x307x34orexin_on03.930122
7x31Ligorexin_on07.890110
7x387x42orexin_on05.443330112
7x417x42orexin_on04.210022
2x532x56orexin_on03.413330022
E3Ligorexin_on03.726671110
7x27Ligorexin_on06.016670110
2x593x32orexin_on02.023330021

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
orexin_off ox2_off
ox1_off
orexin_on ox2_on
Network Difference
Value orexin_off orexin_on
Imin 3.62583 3.34333
Number of Linked Nodes 275 260
Number of Specific Nodes 17 (6.18%) 2  (0.77%)
Number of Shared Nodes 258 (93.82%) 258  (99.23%)
Number of Links 298 288
Number of Specific Links 130 (43.62%) 120  (41.67%)
Number of Shared Links 168 (56.38%) 168  (58.33%)
Number of Hubs 39 35
Number of Specific Hubs 18 (46.15%) 14  (40.00%)
Number of Shared Hubs 21 (53.85%) 21  (60.00%)
Average % Shared Neighbours (Jaccard) 42.96
Average % Shared Neighbours (Otsuka) 52.42
Average % Shared Neighbours (Overlap Coefficient) 61.96
Average % Shared Cliques (k3-6) 79.17
Graphlets Similarity 0.544401
Paths Difference
Value orexin_off orexin_on
Number Of Nodes in MetaPath 70 87
Specific Nodes in MetaPath 30 (42.86%) 47  (54.02%)
Shared Nodes in MetaPath 258 (93.82%) 258  (93.82%)
Number Of Links MetaPath 70 94
Specific Links in MetaPath 45 (64.29%) 69  (73.40%)
Shared Links in MetaPath 168 (56.38%) 168  (56.38%)
Number of Shortest Paths 51948 49812
Length Of Smallest Path 3 3
Average Path Length 14.8651 13.6012
Length of Longest Path 38 32
Minimum Path Strength 0.697083 0.731667
Average Path Strength 5.95345 5.49919
Maximum Path Strength 19.1548 20.9667
Minimum Path Correlation 0.700833 0.7
Average Path Correlation 0.927205 0.921507
Maximum Path Correlation 0.99 0.99
Minimum % Of Corr. Nodes 3.33333 3.84615
Average % Of Corr. Nodes 48.9826 45.2673
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 46.6222 43.5399
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

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