Orange: nodes, hubs and links specific of prostanoid_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of prostanoid_on network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner prostanoid_off Avg Int. Strength prostanoid_on Avg Int. Strength prostanoid_off Num Of Links prostanoid_on Num Of Links ConSurf
11x39 prostanoid_off1000417
21x43 prostanoid_off500626
31x49 prostanoid_off00419
4I1 prostanoid_off500736
52x64 prostanoid_off500616
63x35 prostanoid_off1000427
73x36 prostanoid_off500417
83x37 prostanoid_off750538
93x49 prostanoid_off00429
103x50 prostanoid_off500739
113x51 prostanoid_off00438
123x54 prostanoid_off500429
13I2x56 prostanoid_off00425
14I2x57 prostanoid_off00427
154x38 prostanoid_off500418
164x50 prostanoid_off00428
174x56 prostanoid_off00437
185x35 prostanoid_off00413
195x43 prostanoid_off500727
205x44 prostanoid_off500437
215x50 prostanoid_off00418
226x32 prostanoid_off00438
236x33 prostanoid_off500529
246x37 prostanoid_off00428
256x51 prostanoid_off500527
266x52 prostanoid_off500427
276x58 prostanoid_off500426
287x34 prostanoid_off500526
297x31 prostanoid_off500410
301x50 Shared00449
312x39 Shared500448
322x42 Shared5050658
332x50 Shared5050559
34E1x50 Shared1000546
353x32 Shared5033.3333648
363x33 Shared10033.3333657
373x34 Shared5050457
38E2 Shared10010020255
39E2x51 Shared10050746
40E2x52 Shared5050567
416x48 Shared5083.3333558
426x54 Shared5050646
43E3 Shared10083.3333962
447x45 Shared066.6667449
457x53 Shared5050559
468x47 Shared500469
47Lig Shared10010015150
48NT Shared50501080
492x40 prostanoid_on00248
502x41 prostanoid_on00146
512x51 prostanoid_on00248
522x57 prostanoid_on00348
53E1 prostanoid_on0100150
54E1x49 prostanoid_on00344
553x56 prostanoid_on00247
56I2x53 prostanoid_on500258
575x33 prostanoid_on00143
585x53 prostanoid_on00156
595x55 prostanoid_on00246
60I3 prostanoid_on00240
616x38 prostanoid_on050347
627x46 prostanoid_on083.3333369
638x48 prostanoid_on00346
   
Orange: nodes, hubs and links specific of prostanoid_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of prostanoid_on network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner prostanoid_off Recurrence prostanoid_on Recurrence prostanoid_off Hub1? prostanoid_on Hub1? prostanoid_off Hub2? prostanoid_on Hub2? ConSurf1 ConSurf2
12x64 Lig prostanoid_off10.43370YesNoYesYes60
23x32 Lig prostanoid_off45.88626.20528YesYesYesYes80
33x32 6x48 prostanoid_off1000YesYesYesYes88
43x39 7x45 prostanoid_off22.74050NoNoYesYes99
52x50 3x39 prostanoid_off19.82960.487293YesYesNoNo99
61x50 7x50 prostanoid_off19.62430.891315YesYesNoNo99
71x49 7x50 prostanoid_off17.86770YesNoNoNo99
82x50 7x49 prostanoid_off25.31010YesYesNoNo99
96x36 7x53 prostanoid_off38.39940NoNoYesYes89
106x33 6x36 prostanoid_off34.47850YesNoNoNo98
116x32 6x33 prostanoid_off18.23680YesNoYesNo89
126x29 6x32 prostanoid_off11.66020NoNoYesNo78
136x29 I1 prostanoid_off10.87770NoNoYesNo76
146x44 6x48 prostanoid_off40.10320NoNoYesYes88
153x43 6x44 prostanoid_off39.440NoNoNoNo88
163x43 6x41 prostanoid_off37.59190NoNoNoNo88
176x37 6x41 prostanoid_off27.00280YesNoNoNo88
182x39 6x37 prostanoid_off15.51460YesYesYesNo88
193x50 6x33 prostanoid_off14.89580YesNoYesNo99
202x49 4x50 prostanoid_off12.18195.16284NoNoYesNo98
212x45 4x50 prostanoid_off10.88330NoNoYesNo88
223x25 E2 prostanoid_off17.0020NoNoYesYes95
233x25 E1x50 prostanoid_off15.76160NoNoYesYes96
243x28 E1x50 prostanoid_off15.3870NoNoYesYes66
25E2 E2x50 prostanoid_off16.79112.2946YesYesNoNo59
26E1x50 E2x50 prostanoid_off15.45630YesYesNoNo69
275x43 6x51 prostanoid_off10.74450YesNoYesNo77
283x37 5x43 prostanoid_off16.40540YesNoYesNo87
293x36 6x48 prostanoid_off16.00580YesNoYesYes78
305x54 6x41 prostanoid_off19.24970NoNoNoNo88
313x47 5x54 prostanoid_off18.21180NoNoNoNo98
323x47 5x57 prostanoid_off17.16850NoNoNoNo97
333x51 5x57 prostanoid_off15.06510YesNoNoNo87
343x50 3x54 prostanoid_off11.54920YesNoYesNo99
35E2 E3 prostanoid_off18.58097.00099YesYesYesYes52
366x51 6x52 prostanoid_off10.71120YesNoYesNo77
373x32 E2x51 prostanoid_off40.12541.93684YesYesYesYes86
38E2 E2x51 prostanoid_off35.99081.59141YesYesYesYes56
396x48 7x45 Shared81.036243.2118YesYesYesYes89
401x50 2x50 Shared26.594916.6821YesYesYesYes99
417x45 7x49 Shared56.633584.9803YesYesNoNo99
427x49 7x53 Shared42.2066100NoNoYesYes99
432x39 3x50 Shared11.674145.2196YesYesYesNo89
442x49 2x50 Shared19.224711.143NoNoYesYes99
45E2 Lig Shared44.984375.8666YesYesYesYes50
463x51 3x55 Shared10.791720.8734YesNoNoNo87
471x42 7x42 prostanoid_on012.3026NoNoNoNo88
487x42 Lig prostanoid_on3.862713.4993NoNoYesYes80
491x42 7x43 prostanoid_on011.0998NoNoNoNo85
502x50 7x46 prostanoid_on0.929617.4809YesYesNoYes99
517x46 Lig prostanoid_on059.2277NoYesYesYes90
526x37 8x47 prostanoid_on034.5454YesNoYesYes89
533x50 6x37 prostanoid_on035.4028YesNoYesNo98
542x39 3x46 prostanoid_on1.8952753.3463YesYesNoNo89
553x46 7x53 prostanoid_on089.2024NoNoYesYes99
566x48 Lig prostanoid_on043.073YesYesYesYes80
577x45 7x46 prostanoid_on043.6097YesYesNoYes99
581x50 2x47 prostanoid_on1.8092511.1553YesYesNoNo98
591x54 2x47 prostanoid_on010.3411NoNoNoNo88
602x42 3x46 prostanoid_on9.9592148.4271YesYesNoNo89
612x38 2x42 prostanoid_on044.356NoNoYesYes68
622x38 3x49 prostanoid_on036.6118NoNoYesNo69
633x49 I2x53 prostanoid_on035.5385YesNoNoYes98
642x46 2x50 prostanoid_on017.2927NoNoYesYes99
65E1x50 E2 prostanoid_on013.9403YesYesYesYes65
66E1 E1x50 prostanoid_on010.5138NoYesYesYes06
67E2 E2x52 prostanoid_on014.7298YesYesYesYes57
683x52 I2x53 prostanoid_on030.0179NoNoNoYes68
693x52 3x56 prostanoid_on028.8983NoNoNoYes67
703x55 3x56 prostanoid_on8.6216922.0361NoNoNoYes77
715x39 E2x52 prostanoid_on010.6187NoNoYesYes87
723x51 5x61 prostanoid_on018.5171YesNoNoNo89
735x61 5x65 prostanoid_on017.6166NoNoNoNo99
746x32 8x47 prostanoid_on014.7823YesNoYesYes89
753x50 6x38 prostanoid_on010.4521YesNoNoYes97
766x41 7x53 prostanoid_on017.2681NoNoYesYes89
774x60 E2 prostanoid_on012.2841NoNoYesYes95
784x60 5x39 prostanoid_on1.6399810.1838NoNoNoNo98
794x56 5x39 prostanoid_on018.659YesNoNoNo78
804x52 4x56 prostanoid_on011.8678NoNoYesNo57
815x53 6x41 prostanoid_on012.4568NoYesNoNo68
822x46 7x49 prostanoid_on016.019NoNoNoNo99

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
1x362x65Shared3.2156.9150121
1x381x39prostanoid_off4.26500021
1x392x60prostanoid_off5.7101011
1x392x64prostanoid_off3.3201011
1x432x57prostanoid_off12.4301011
2x503x39Shared10.869.123334122
2x507x46Shared5.966.311674121
2x547x46Shared3.443.850111
2x572x58prostanoid_off3.4901111
2x593x28prostanoid_off3.55500022
2x602x64prostanoid_off5.51501011
2x60Ligprostanoid_off8.08501010
2x64Ligprostanoid_off6.427501010
3x28E1x50prostanoid_off7.05500122
E1x50E2x50prostanoid_off7.18501122
3x25E2prostanoid_off5.13501021
3x25E2x50Shared7.287.281022
3x26E2prostanoid_off3.5801021
3x273x31prostanoid_off4.532500022
3x29E2Shared3.210.141021
3x32E2x51Shared3.0454.356671111
3x32LigShared7.537.0951110
3x334x57Shared3.6753.461112
3x33E2x52Shared4.725.553331111
3x335x43Shared5.9653.141112
3x365x43prostanoid_off4.1501012
3x375x43prostanoid_off5.27501022
3x397x45prostanoid_off5.72504122
3x397x46Shared5.0457.374121
4x594x60Shared3.4052.461022
4x59E2prostanoid_off5.53501021
4x605x39Shared6.03754.3350122
5x39E2prostanoid_off3.432501021
5x36E2Shared10.7457.061121
E2E2x50Shared4.13.568331112
E2E2Shared112.5763.97171111
E2E2x51Shared9.06259.416671111
E2E3Shared7.78257.183331112
E2LigShared10.687514.39831110
7x34E2Shared5.0254.3751121
7x38E2Shared6.75256.641111
E2x51E2x52Shared10.7212.281111
6x51E2x51prostanoid_off3.65501011
6x58E2Shared12.9954.951671121
6x446x48prostanoid_off4.8200021
6x587x34prostanoid_off7.38501122
E3E3Shared14.682511.4051122
7x327x35prostanoid_off6.522500121
7x35Ligprostanoid_off5.5800110
7x38LigShared14.02257.328331110
7x39LigShared19.34255.040010
7x42LigShared7.61510.561010
2x63Ligprostanoid_off4.36500010
3x33Ligprostanoid_off3.57501110
4x65Ligprostanoid_off3.56501010
E2x51Ligprostanoid_off6.8801110
E2x52Ligprostanoid_off4.96501110
6x51Ligprostanoid_off3.8201010
7x31Ligprostanoid_off3.7101010
NTNTShared22.1824.111122
E2NTShared35.25511.41112
5x32NTprostanoid_off4.5801022
E3NTShared4.4814.3351122
7x31NTprostanoid_off4.65501012
E1x49NTprostanoid_off4.6101022
1x432x58prostanoid_off5.34501011
2x577x42prostanoid_off4.26501111
2x64E1prostanoid_off3.21501012
E1x49E2prostanoid_off3.52501021
3x25E1x50prostanoid_off5.22501022
3x22E2prostanoid_off7.00500021
3x294x65prostanoid_off6.5901021
3x323x33prostanoid_off4.82501111
3x326x48prostanoid_off3.5101111
3x326x51prostanoid_off4.6401111
3x327x42prostanoid_off5.3601111
3x334x61prostanoid_off12.3801112
3x363x37prostanoid_off3.7301012
3x366x48prostanoid_off5.81501011
4x615x43prostanoid_off3.58501122
4x65E2x52prostanoid_off3.601011
6x58E2x51prostanoid_off5.0501121
7x31E2x51prostanoid_off3.8601011
5x36E2x52prostanoid_off3.94501121
5x35E2Shared3.222.5051021
5x32E2prostanoid_off3.17501021
5x33E3prostanoid_off8.9300122
5x436x51prostanoid_off5.9701021
5x436x52prostanoid_off3.27501022
5x436x55prostanoid_off3.0601022
6x487x41Shared3.895.186670112
6x487x45Shared3.3911.48830112
6x516x52prostanoid_off5.9901012
7x317x34prostanoid_off3.98501012
1x432x61prostanoid_off2.85501011
1x397x43prostanoid_off2.8301012
1x362x64prostanoid_off2.6400121
3x365x461prostanoid_off2.41501012
1x352x64prostanoid_off2.1800021
1x431x47prostanoid_off1.96501012
1x401x43Shared1.8550.760021
1x462x54prostanoid_off1.85500021
1x432x55prostanoid_off1.82501012
4x594x63prostanoid_off1.65501022
5x345x35prostanoid_off1.3200022
7x28E3prostanoid_off1.01500122
3x22NTprostanoid_on03.640022
7x28NTprostanoid_on04.40122
7x32NTprostanoid_on012.5150122
1x36NTprostanoid_on05.7650122
1x387x39prostanoid_on017.81670021
1x39Ligprostanoid_on08.438331010
1x427x42prostanoid_on05.406670021
1x427x43prostanoid_on012.1950022
1x43Ligprostanoid_on03.581671010
2x54Ligprostanoid_on011.83830110
2x573x28prostanoid_on05.131112
2x573x32prostanoid_on03.841671111
2x57Ligprostanoid_on010.79831110
2x603x28prostanoid_on012.96331012
2x61Ligprostanoid_on05.253330010
2x64E1x50prostanoid_on012.97671012
2x65E2prostanoid_on09.386670111
2x65Ligprostanoid_on06.481670110
E1x50E2prostanoid_on07.676671121
3x264x61prostanoid_on04.5851022
3x283x32prostanoid_on060121
3x33E2prostanoid_on04.9451111
3x33E2x51prostanoid_on04.068331111
3x36Ligprostanoid_on04.746671010
3x406x48prostanoid_on017.6550021
4x60E2prostanoid_on018.16830121
5x33E2prostanoid_on06.9750121
7x28E2prostanoid_on07.7150121
7x31E2prostanoid_on06.5551011
7x35E2prostanoid_on03.8050111
E2E2x52prostanoid_on041111
5x39E2x52prostanoid_on04.2651021
5x335x36prostanoid_on05.1950122
6x487x46prostanoid_on06.206670111
6x48Ligprostanoid_on03.680110
6x516x55prostanoid_on05.363331012
7x357x39prostanoid_on012.14830111
7x457x46prostanoid_on06.160121
7x46Ligprostanoid_on05.3654110
2x63E1prostanoid_on04.643330012
E1E1x50prostanoid_on05.478330122
5x34E2prostanoid_on012.5750021
5x325x33prostanoid_on03.998331022
6x517x37prostanoid_on03.251012
4x61E2prostanoid_on03.218331121
2x58Ligprostanoid_on02.731671010
5x37E2x52prostanoid_on02.481670021
2x573x31prostanoid_on02.371671112
5x38E2x52prostanoid_on02.3450021
1x472x55prostanoid_on02.336670022
1x351x38prostanoid_on01.980022
2x603x27prostanoid_on01.51012
4x63E2prostanoid_on00.7950021
2x592x60prostanoid_on00.760021

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
prostanoid_off ep_off
dp_off
prostanoid_on tp_on
fp-alpha_on
Network Difference
Value prostanoid_off prostanoid_on
Imin 3.0275 3.48833
Number of Linked Nodes 265 271
Number of Specific Nodes 16 (6.04%) 22  (8.12%)
Number of Shared Nodes 249 (93.96%) 249  (91.88%)
Number of Links 316 296
Number of Specific Links 213 (67.41%) 193  (65.20%)
Number of Shared Links 103 (32.59%) 103  (34.80%)
Number of Hubs 48 34
Number of Specific Hubs 29 (60.42%) 15  (44.12%)
Number of Shared Hubs 19 (39.58%) 19  (55.88%)
Average % Shared Neighbours (Jaccard) 20.04
Average % Shared Neighbours (Otsuka) 27.27
Average % Shared Neighbours (Overlap Coefficient) 34.65
Average % Shared Cliques (k3-6) 51.63
Graphlets Similarity 0.599391
Paths Difference
Value prostanoid_off prostanoid_on
Number Of Nodes in MetaPath 44 42
Specific Nodes in MetaPath 27 (61.36%) 25  (59.52%)
Shared Nodes in MetaPath 249 (93.96%) 249  (93.96%)
Number Of Links MetaPath 46 44
Specific Links in MetaPath 38 (82.61%) 36  (81.82%)
Shared Links in MetaPath 103 (32.59%) 103  (32.59%)
Number of Shortest Paths 69277 53724
Length Of Smallest Path 3 3
Average Path Length 11.205 12.7553
Length of Longest Path 25 29
Minimum Path Strength 0.785 0.363333
Average Path Strength 5.28912 6.28515
Maximum Path Strength 23 15.3717
Minimum Path Correlation 0.7 0.7
Average Path Correlation 0.907009 0.903847
Maximum Path Correlation 0.99 0.99
Minimum % Of Corr. Nodes 4.7619 3.84615
Average % Of Corr. Nodes 45.0536 45.2725
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 54.9682 44.5007
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

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