Orange: nodes, hubs and links specific of sst2_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of sst2_on network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner sst2_off Avg Int. Strength sst2_on Avg Int. Strength sst2_off Num Of Links sst2_on Num Of Links ConSurf
11x32 sst2_off10.12750.975423
21x60 sst2_off7.9852.58083436
3I1x50 sst2_off7.5652.88417
42x40 sst2_off7.91754.88438
52x64 sst2_off5.0125.7524
63x37 sst2_off6.714.6875526
73x38 sst2_off6.38811.5912527
83x50 sst2_off6.1426.815529
94x50 sst2_off5.8657.83833439
104x56 sst2_off5.393.9025434
115x54 sst2_off4.90256.525427
126x44 sst2_off10.712510.275419
136x51 sst2_off7.37611.1263526
146x52 sst2_off10.1226.01537
157x27 sst2_off3.153.40667431
167x45 sst2_off6.39756.6225439
178x57 sst2_off3.3851.815425
18Lig Shared23.6248.8070820180
191x39 Shared4.9485.37063547
201x54 Shared4.72252.7275447
212x42 Shared5.89755.5465457
222x50 Shared6.1786.7045559
232x53 Shared10.687.695456
24E1x50 Shared8.778337.35958668
25E1x52 Shared9.79257.1465456
263x36 Shared8.567.015447
273x51 Shared4.967.13688648
28E2.W197 Shared15.36254.81536475
295x35 Shared9.9255.33437443
305x36 Shared8.9654.4855454
316x30 Shared6.77253.671456
326x48 Shared10.72838.3385658
337x42 Shared6.1116710.3031647
347x53 Shared6.7164.7525569
358x50 Shared8.4742.83375548
361x36 sst2_on4.12.02187245
372x46 sst2_on2.754.9025249
382x51 sst2_on6.413333.43375347
392x57 sst2_on4.093335.67313347
402x63 sst2_on10.955.22062145
413x35 sst2_on11.05334.80687347
423x55 sst2_on8.616676.07813347
433x56 sst2_on7.0253.3255
44I2x57 sst2_on8.365.95188345
454x38 sst2_on8.0853.02313246
464x64 sst2_on10.49335.99187344
47E2x50 sst2_on10.146.8575349
48E2.P198 sst2_on13.735.29062245
495x39 sst2_on11.4054.48375247
505x47 sst2_on12.15675.61125348
515x50 sst2_on6.8852.98563249
525x53 sst2_on2.942146
535x58 sst2_on8.97.39188249
545x62 sst2_on02.60313045
556x26 sst2_on11.93.32938344
566x49 sst2_on5.913333.755345
576x54 sst2_on11.13333.386354
587x39 sst2_on2.7953.65937245
597x49 sst2_on3.835.37042369
607x55 sst2_on2.511.97125147
   
Orange: nodes, hubs and links specific of sst2_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of sst2_on network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner sst2_off Recurrence sst2_on Recurrence sst2_off Hub1? sst2_on Hub1? sst2_off Hub2? sst2_on Hub2? ConSurf1 ConSurf2
13x32 7x42 sst2_off12.85380.101344NoNoYesYes67
21x40 2x61 sst2_off15.69960NoNoNoNo56
32x54 2x57 sst2_off26.87750NoNoNoYes67
41x47 2x54 sst2_off24.50598.77937NoNoNoNo66
52x50 3x35 sst2_off98.32940YesYesNoYes97
61x60 8x53 sst2_off21.23320YesNoNoNo65
78x53 I1x50 sst2_off27.45190NoNoYesNo57
88x50 I1x50 sst2_off31.46770YesYesYesNo87
97x53 8x50 sst2_off43.34650YesYesYesYes98
101x54 2x44 sst2_off23.07770YesYesNoNo76
113x50 6x37 sst2_off50.59820YesNoNoNo98
123x46 6x37 sst2_off51.9420NoNoNoNo98
132x43 3x46 sst2_off70.4980NoNoNoNo89
142x43 7x53 sst2_off71.65740NoNoYesYes89
152x41 4x42 sst2_off10.80378.65551NoNoNoNo57
162x44 2x45 sst2_off20.1370NoNoNoNo69
172x45 4x50 sst2_off15.64698.02868NoNoYesNo99
18E1x50 E2x50 sst2_off22.59820.123865YesYesNoYes89
193x29 E2x50 sst2_off24.96971.66654NoNoNoYes59
203x29 Lig sst2_off28.41630NoNoYesYes50
211x40 2x62 sst2_off14.34520NoNoNoNo55
222x62 E1x52 sst2_off12.47961.86923NoNoYesYes56
23E1x49 E1x51 sst2_off15.34127.44314NoNoNoNo44
24E1x51 E1x52 sst2_off17.21219.28609NoNoYesYes46
253x36 3x37 sst2_off21.10149.39869YesYesYesNo76
263x36 6x52 sst2_off21.57580YesYesYesNo77
275x51 5x54 sst2_off15.96310NoNoYesNo67
285x47 5x51 sst2_off21.20167.17288NoYesNoNo86
293x50 6x34 sst2_off42.14490YesNoNoNo97
303x51 5x61 sst2_off26.05010YesYesNoNo89
313x54 5x61 sst2_off27.4731.45635NoNoNoNo89
323x54 6x30 sst2_off28.9960NoNoYesYes86
336x30 6x34 sst2_off40.73780YesYesNoNo67
345x44 6x52 sst2_off10.68251.77164NoNoYesNo57
356x51 6x52 sst2_off15.46770YesNoYesNo67
366x48 7x41 sst2_off26.87221.45635YesYesNoNo87
377x41 7x42 sst2_off43.57310NoNoYesYes77
381x53 7x53 sst2_off14.70360NoNoYesYes99
391x53 2x47 sst2_off13.32810NoNoNoNo99
401x54 2x47 sst2_off13.54942.20329YesYesNoNo79
411x39 7x42 sst2_off21.82870YesYesYesYes77
426x51 7x41 sst2_off16.21080YesNoNoNo67
436x48 6x52 sst2_off15.11460YesYesYesNo87
441x39 2x61 Shared17.064611.6846YesYesNoNo76
453x32 Lig Shared68.3933.0193NoNoYesYes60
462x57 7x42 Shared32.084332.6252NoYesYesYes77
471x47 2x51 Shared23.515213.1259NoNoNoYes67
482x53 3x35 Shared10027.5843YesYesNoYes67
492x53 3x32 Shared55.757633.1844YesYesNoNo66
507x49 7x53 Shared94.924941.84NoYesYesYes99
512x50 7x49 Shared94.94616.6466YesYesNoYes99
521x54 2x51 Shared22.608760.3896YesYesNoYes77
532x42 4x42 Shared12.295111.6771YesYesNoNo77
542x42 3x46 Shared20.094956.1031YesYesNoNo79
55E1x50 E1x52 Shared17.934118.3883YesYesYesYes86
563x36 Lig Shared43.573187.5084YesYesYesYes70
573x36 6x48 Shared11.293859.744YesYesYesYes78
585x47 6x52 Shared36.66423.0763NoYesYesNo87
59E2x52 Lig Shared18.192427.7194NoNoYesYes50
60E2.W197 E2x52 Shared15.167323.0351YesYesNoNo55
615x36 Lig Shared13.681237.8087YesYesYesYes40
625x47 6x49 Shared13.328114.3045NoYesNoYes85
632x53 7x42 Shared45.649550.4842YesYesYesYes67
645x36 E2.W197 sst2_on023.4967YesYesYesYes45
651x39 2x57 sst2_on028.0459YesYesNoYes77
667x42 Lig sst2_on048.0782YesYesYesYes70
671x36 2x61 sst2_on010.4159NoYesNoNo56
681x39 7x39 sst2_on4.864311.3768YesYesNoYes75
691x50 2x51 sst2_on076.0641NoNoNoYes97
701x50 2x50 sst2_on6.7404569.5668NoNoYesYes99
712x50 7x46 sst2_on0.5797198.8815YesYesNoNo98
722x53 7x46 sst2_on0100YesYesNoNo68
732x53 3x36 sst2_on041.0742YesYesYesYes67
741x53 7x55 sst2_on013.3473NoNoNoYes97
751x53 7x50 sst2_on014.6573NoNoNoNo99
767x49 7x50 sst2_on020.9181NoYesNoNo99
777x45 7x49 sst2_on056.1857YesNoNoYes99
786x48 7x45 sst2_on8.0421656.6211YesYesYesNo89
791x54 1x58 sst2_on054.3991YesYesNoNo73
801x56 8x50 sst2_on027.0475NoNoYesYes78
818x50 I1x49 sst2_on036.5626YesYesNoNo85
821x57 I1x49 sst2_on046.2878NoNoNoNo75
831x57 2x44 sst2_on050.3678NoNoNoNo76
841x58 2x44 sst2_on1.6073852.3872NoNoNoNo36
852x46 3x46 sst2_on044.6551NoYesNoNo99
862x46 2x50 sst2_on1.1436134.0402NoYesYesYes99
872x46 7x49 sst2_on0.5586313.0245NoYesNoYes99
883x46 7x53 sst2_on014.4584NoNoYesYes99
892x42 3x49 sst2_on033.0643YesYesNoNo78
903x38 4x50 sst2_on7.8735211.9999YesNoYesNo79
913x38 4x53 sst2_on1.6073813.9742YesNoNoNo77
923x34 4x53 sst2_on015.941NoNoNoNo57
933x34 3x35 sst2_on019.8521NoNoNoYes57
942x63 E1x50 sst2_on1.4492832.4262NoYesYesYes58
952x63 Lig sst2_on047.5865NoYesYesYes50
964x59 4x63 sst2_on013.809NoNoNoNo44
974x63 4x64 sst2_on1.4545517.2435NoNoNoYes44
984x64 E2.W197 sst2_on4.2582323.9847NoYesYesYes45
993x40 6x48 sst2_on036.6039NoNoYesYes88
1003x40 5x50 sst2_on2.819535.3389NoNoNoYes89
1013x44 5x50 sst2_on031.4991NoNoNoYes79
1023x44 5x53 sst2_on030.2042NoNoNoYes76
1033x50 5x58 sst2_on022.4232YesNoNoYes99
1043x50 7x53 sst2_on023.4067YesNoYesYes99
1053x49 I2x57 sst2_on5.8656130.0991NoNoNoYes85
1063x51 5x57 sst2_on5.0856423.6168YesYesNoNo87
1075x53 5x57 sst2_on024.9493NoYesNoNo67
1084x38 4x41 sst2_on012.1275NoYesNoNo65
1094x38 I2x57 sst2_on021.1471NoYesNoYes65
1105x36 6x59 sst2_on010.9414YesYesNoNo44
1115x43 Lig sst2_on036.5363NoNoYesYes40
1125x43 6x52 sst2_on026.5708NoNoYesNo47
1135x58 6x37 sst2_on019.1314NoYesNoNo98
1145x62 6x37 sst2_on017.9416NoYesNoNo58
1155x62 6x30 sst2_on013.3323NoYesYesYes56
1166x54 Lig sst2_on2.7088317.4386NoYesYesYes40
1176x54 7x30 sst2_on012.5178NoYesNoNo44
1181x56 8x53 sst2_on5.0856424.9531NoNoNoNo75
1198x52 8x53 sst2_on022.8286NoNoNoNo55
1208x49 8x52 sst2_on010.6073NoNoNoNo55
1211x60 8x52 sst2_on010.2432YesNoNoNo65
1225x39 5x43 sst2_on1.4387410.8438NoYesNoNo74
1231x50 7x50 sst2_on5.0698312.7093NoNoNoNo99

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
5x36LigShared23.2810.911110
6x54LigShared9.525.18751110
6x61Ligsst2_off4.4200010
E3.P286LigShared14.372.56751110
7x30Ligsst2_off5.4101010
7x31LigShared14.253.8051010
7x34LigShared17.1113.0151110
3x29Ligsst2_off5.6101010
E2x51LigShared8.197.3551010
E2x52LigShared7.934.4151110
3x32LigShared11.067.8651110
3x36LigShared8.1410.71251110
2x64Ligsst2_off7.9401010
7x35Ligsst2_off15.5201010
1x32Ligsst2_off16.7901010
E1.E106Ligsst2_off13.8801010
1x301x32sst2_off8.7700021
1x322x64sst2_off4.4301011
1x32E1.E106sst2_off10.5201011
1x351x39sst2_off8.2101022
1x352x64sst2_off4.4701021
1x357x35Shared6.795.431021
1x362x65Shared5.032.93750022
1x392x64Shared5.054.11021
1x397x42sst2_off4.9601021
2x533x32Shared5.975.67251121
2x537x42Shared12.3817.5351121
2x577x42Shared4.699.08250121
2x603x28sst2_off4.4700012
2x63E1x50Shared10.955.47750112
E1x50E2x50Shared18.2814.3651122
3x29E2x50Shared4.863.6451012
3x327x42Shared4.68.621111
3x363x37Shared10.543.8051112
3x366x48Shared7.677.3951112
3x366x52sst2_off7.8901112
4x61E2x52sst2_off7.3600021
E2.W197E2x52Shared15.274.99250121
5x39E2.W197Shared15.035.26250122
5x365x40sst2_off6.0401112
5x366x58sst2_off5.0901111
5x395x43Shared7.783.890121
6x486x51sst2_off5.0101021
6x486x52sst2_off8.6801022
6x487x41Shared18.198.491022
6x516x52sst2_off8.2501112
6x516x55Shared14.512.68751111
6x517x37sst2_off3.9301112
6x517x41sst2_off5.1901112
6x547x33Shared9.952.491112
6x547x34Shared13.935.091111
7x31E3.P286sst2_off6.6901011
7x277x30Shared5.95.89750021
7x347x38Shared7.875.8951112
7x387x42sst2_off5.0500021
7x417x42sst2_off4.9901021
E2.S192Ligsst2_off3.7400010
1x31Ligsst2_off3.7200010
E3.P286E3.S285Shared3.564.451112
1x301x33sst2_off3.3600022
3x294x65sst2_off3.2201012
1x362x64sst2_off3.1700021
5x406x59Shared3.075.3750022
E2.N196E2x51sst2_off2.9200021
7x317x32sst2_off1.7401012
6x596x60sst2_off1.6200022
7x27E3.I284sst2_off1.5200022
5x335x36Shared1.450.7250021
6x58Ligsst2_on02.90750010
5x43Ligsst2_on04.0350110
6x51Ligsst2_on09.5651110
7x42Ligsst2_on05.9751110
2x63Ligsst2_on08.38250110
1x392x57sst2_on05.56751022
2x533x36sst2_on06.14751121
2x63E2.S192sst2_on03.97250111
2x63E2x50sst2_on03.050112
2x647x35sst2_on07.31011
4x615x39sst2_on05.0250022
5x36E2.W197sst2_on05.06251112
5x366x59sst2_on04.731112
5x406x55sst2_on05.6650021
E2.N186E2.S192sst2_on03.7250021
6x55Ligsst2_on04.420110
2x60Ligsst2_on04.7850010
4x65E2x52sst2_on02.840021
5x436x52sst2_on02.810112
6x606x61sst2_on02.6850021
6x546x57sst2_on02.641112
7x327x35sst2_on02.5150021
1x291x31sst2_on02.25250021
7x30E3.I284sst2_on02.14251012
1x291x30sst2_on01.84250022
6x547x30sst2_on01.52251111
1x322x65sst2_on01.171012
5x345x36sst2_on010021
1x321x33sst2_on00.781012
6x61E3.I284sst2_on00.3650012

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
sst2_off 7XNA-SST2-CYN154806
sst2_on 7WIC-SST2-Somatostatin-14-Gi1/β1/γ2
7WIG-SST2-L-054,264-Gi1/β1/γ2
7YAE-SST2-Octreotide-Gi1/β1/γ2
7YAC-SST2-Paltusotine-Gi1/β1/γ2
Network Difference
Value sst2_off sst2_on
Imin 3.92 2.8675
Number of Linked Nodes 270 283
Number of Specific Nodes 8 (2.96%) 21  (7.42%)
Number of Shared Nodes 262 (97.04%) 262  (92.58%)
Number of Links 297 308
Number of Specific Links 150 (50.51%) 161  (52.27%)
Number of Shared Links 147 (49.49%) 147  (47.73%)
Number of Hubs 35 43
Number of Specific Hubs 17 (48.57%) 25  (58.14%)
Number of Shared Hubs 18 (51.43%) 18  (41.86%)
Average % Shared Neighbours (Jaccard) 33.30
Average % Shared Neighbours (Otsuka) 42.56
Average % Shared Neighbours (Overlap Coefficient) 52.21
Average % Shared Cliques (k3-6) 79.84
Graphlets Similarity 0.594682
Paths Difference
Value sst2_off sst2_on
Number Of Nodes in MetaPath 58 74
Specific Nodes in MetaPath 21 (36.21%) 37  (50.00%)
Shared Nodes in MetaPath 262 (97.04%) 262  (97.04%)
Number Of Links MetaPath 63 80
Specific Links in MetaPath 43 (68.25%) 60  (75.00%)
Shared Links in MetaPath 147 (49.49%) 147  (49.49%)
Number of Shortest Paths 42825 70654
Length Of Smallest Path 3 3
Average Path Length 12.6834 13.0344
Length of Longest Path 31 31
Minimum Path Strength 1.44 0.495
Average Path Strength 7.6636 5.43032
Maximum Path Strength 20.035 14.1963
Minimum Path Correlation 0.7 0.7
Average Path Correlation 0.92733 0.919152
Maximum Path Correlation 1 0.99
Minimum % Of Corr. Nodes 4.7619 3.57143
Average % Of Corr. Nodes 54.8705 45.5258
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 41.5104 50.6827
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

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