Orange: nodes, hubs and links specific of vasopressin-ot_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of vasopressin-ot_on network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner vasopressin-ot_off Avg Int. Strength vasopressin-ot_on Avg Int. Strength vasopressin-ot_off Num Of Links vasopressin-ot_on Num Of Links ConSurf
11x57 vasopressin-ot_off2.75752.135427
2I1x51 vasopressin-ot_off9.1540507
32x38 vasopressin-ot_off6.79254.1025427
42x41 vasopressin-ot_off6.473.51435
52x42 vasopressin-ot_off5.9357.12667638
63x29 vasopressin-ot_off8.64610.2425524
73x33 vasopressin-ot_off8.86256.76333435
83x44 vasopressin-ot_off4.9453.7275427
93x50 vasopressin-ot_off7.6153.7275629
103x54 vasopressin-ot_off5.1251.47418
11I2 vasopressin-ot_off6.5880.79517
124x64 vasopressin-ot_off7.5353.80333435
135x39 vasopressin-ot_off7.0146.35537
146x40 vasopressin-ot_off5.144.74833438
156x41 vasopressin-ot_off6.061.2475428
167x34 vasopressin-ot_off3.19756.19833434
177x56 vasopressin-ot_off7.7655.86437
182x56 Shared12.89258.402457
19E1x50 Shared6.1355.761457
203x37 Shared6.4426.136556
214x50 Shared4.40753.11625449
224x61 Shared7.577.61875546
234x65 Shared8.4087.95625546
24E2 Shared16.409213.273212114
255x58 Shared8.39255.333459
266x48 Shared8.843338658
27E3 Shared6.20756.18667464
287x53 Shared7.57755.07875449
29Lig Shared10.8889.279510200
301x31 vasopressin-ot_on9.614.48145
311x35 vasopressin-ot_on6.566674.702355
321x38 vasopressin-ot_on2.551.23875344
332x40 vasopressin-ot_on2.443.96667169
342x50 vasopressin-ot_on4.873336.438359
353x30 vasopressin-ot_on5.676674.758357
363x32 vasopressin-ot_on11.99335.826357
373x42 vasopressin-ot_on3.7553.4325248
383x51 vasopressin-ot_on5.124.71875347
393x52 vasopressin-ot_on5.542.6675143
403x56 vasopressin-ot_on13.262.0725145
414x43 vasopressin-ot_on3.25.76143
425x43 vasopressin-ot_on6.675.2375345
435x47 vasopressin-ot_on10.042.79248
445x51 vasopressin-ot_on10.093.03625146
455x62 vasopressin-ot_on03.12125045
466x44 vasopressin-ot_on8.96.28249
476x51 vasopressin-ot_on10.84338.08375347
486x52 vasopressin-ot_on11.13337.1475347
496x55 vasopressin-ot_on7.303339.175346
507x39 vasopressin-ot_on3.633.1275245
51I1 vasopressin-ot_on03.31050
   
Orange: nodes, hubs and links specific of vasopressin-ot_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of vasopressin-ot_on network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner vasopressin-ot_off Recurrence vasopressin-ot_on Recurrence vasopressin-ot_off Hub1? vasopressin-ot_on Hub1? vasopressin-ot_off Hub2? vasopressin-ot_on Hub2? ConSurf1 ConSurf2
11x35 1x39 vasopressin-ot_off22.75220NoYesNoNo56
21x35 7x35 vasopressin-ot_off16.40690.102191NoYesNoNo54
37x35 7x39 vasopressin-ot_off14.80950NoNoNoYes45
41x38 7x39 vasopressin-ot_off13.18484.78029NoYesNoYes45
51x39 7x38 vasopressin-ot_off28.92190NoNoNoNo66
62x60 7x38 vasopressin-ot_off30.17890NoNoNoNo76
72x56 2x60 vasopressin-ot_off31.70490YesYesNoNo77
86x48 Lig vasopressin-ot_off65.77010YesYesYesYes80
96x40 7x49 vasopressin-ot_off46.53090YesNoNoNo89
101x53 7x53 vasopressin-ot_off18.45430NoNoYesYes99
111x53 2x47 vasopressin-ot_off10.19874.83706NoNoNoNo99
126x47 7x45 vasopressin-ot_off23.29029.70251NoNoNoNo89
136x46 6x47 vasopressin-ot_off22.70284.89951NoNoNoNo68
146x45 6x46 vasopressin-ot_off22.31860NoNoNoNo66
156x41 6x45 vasopressin-ot_off22.28020YesNoNoNo86
165x58 6x41 vasopressin-ot_off78.99330YesYesYesNo98
173x46 6x37 vasopressin-ot_off36.73840NoNoNoNo88
182x38 2x42 vasopressin-ot_off10.09440YesNoYesNo78
193x43 6x40 vasopressin-ot_off35.10260NoNoYesNo88
203x43 6x41 vasopressin-ot_off34.71840NoNoYesNo88
213x50 6x37 vasopressin-ot_off62.0540YesNoNoNo98
223x50 I1x51 vasopressin-ot_off54.0290YesNoYesNo97
232x38 I1x51 vasopressin-ot_off10.35790YesNoYesNo77
24I1x51 I2 vasopressin-ot_off45.91060YesNoYesNo77
252x41 2x42 vasopressin-ot_off20.51270YesNoYesNo58
262x41 2x45 vasopressin-ot_off16.36290YesNoNoNo59
272x45 4x50 vasopressin-ot_off14.09050NoNoYesYes99
283x34 4x57 vasopressin-ot_off13.51961.6748NoNoNoNo67
293x30 3x34 vasopressin-ot_off10.17130NoYesNoNo76
304x61 4x64 vasopressin-ot_off22.30210YesYesYesNo65
314x64 E2 vasopressin-ot_off29.43246.12013YesNoYesYes54
32E1x49 E1x51 vasopressin-ot_off12.37798.5784NoNoNoNo53
334x65 Lig vasopressin-ot_off10.50610YesYesYesYes60
344x61 5x39 vasopressin-ot_off26.69891.82241YesYesYesNo67
355x39 E2 vasopressin-ot_off34.78430YesNoYesYes74
363x29 Lig vasopressin-ot_off11.7960YesNoYesYes40
37E1x50 E1x52 vasopressin-ot_off11.06055.70569YesYesNoNo76
383x22 E2 vasopressin-ot_off15.83057.86306NoNoYesYes44
393x22 3x26 vasopressin-ot_off12.37792.86704NoNoNoNo46
403x33 5x43 vasopressin-ot_off19.17330YesNoNoYes55
415x39 5x43 vasopressin-ot_off17.66932.68536YesNoNoYes75
423x37 3x41 vasopressin-ot_off55.68673.1509YesYesNoNo66
433x41 3x44 vasopressin-ot_off55.68120NoNoYesNo67
443x44 5x54 vasopressin-ot_off55.61530YesNoNoNo78
453x47 5x54 vasopressin-ot_off27.14351.64074NoNoNoNo88
466x30 I2 vasopressin-ot_off33.42850NoNoYesNo87
473x54 6x30 vasopressin-ot_off29.03720YesNoNoNo88
483x54 5x61 vasopressin-ot_off13.79951.63506YesNoNoNo88
495x44 6x52 vasopressin-ot_off15.63294.93358NoNoNoYes57
506x55 Lig vasopressin-ot_off16.0610.709663NoYesYesYes60
516x55 7x34 vasopressin-ot_off15.36940NoYesYesNo64
526x54 7x34 vasopressin-ot_off11.04953.19632NoNoYesNo54
536x40 7x52 vasopressin-ot_off13.86540YesNoNoNo88
546x39 7x52 vasopressin-ot_off10.25364.84842NoNoNoNo78
555x54 6x41 vasopressin-ot_off29.43240NoNoYesNo88
563x47 5x58 vasopressin-ot_off26.66042.97491NoNoYesYes89
572x56 Lig Shared38.824252.6456YesYesYesYes70
586x48 7x45 Shared70.2492100YesYesNoNo89
597x45 7x49 Shared47.9895.708NoNoNoNo99
606x40 7x53 Shared21.539153.6675YesNoYesYes89
615x58 6x37 Shared10015.2322YesYesNoNo98
622x42 3x46 Shared33.208931.7588YesNoNoNo88
634x61 Lig Shared31.644514.9313YesYesYesYes60
643x33 4x61 Shared43.330812.9272YesNoYesYes56
653x33 4x57 Shared15.160816.2882YesNoNoNo57
66E1x49 E2 Shared15.841511.0878NoNoYesYes54
673x33 3x37 Shared55.906211.3716YesNoYesYes56
686x48 6x52 Shared13.107989.6219YesYesNoYes87
691x39 7x39 vasopressin-ot_on011.1616NoNoNoYes65
707x39 Lig vasopressin-ot_on016.5096NoYesYesYes50
712x53 7x46 vasopressin-ot_on1.3173843.3859NoNoNoNo79
722x53 2x56 vasopressin-ot_on045.9521NoNoYesYes77
732x50 7x46 vasopressin-ot_on3.9301835.415NoYesNoNo99
742x50 7x50 vasopressin-ot_on015.4593NoYesNoNo99
751x53 7x50 vasopressin-ot_on014.0456NoNoNoNo99
762x39 2x40 vasopressin-ot_on027.0978NoNoNoYes89
772x39 2x43 vasopressin-ot_on028.5171NoNoNoNo87
782x43 7x53 vasopressin-ot_on1.1472229.7093NoNoYesYes79
797x49 7x53 vasopressin-ot_on094.1864NoNoYesYes99
806x51 6x52 vasopressin-ot_on6.433291.3421NoYesNoYes77
816x51 Lig vasopressin-ot_on6.4222287.5326NoYesYesYes70
822x38 3x49 vasopressin-ot_on012.1835YesNoNoNo79
832x42 3x49 vasopressin-ot_on2.0748722.8284YesNoNoNo89
843x46 7x53 vasopressin-ot_on032.9056NoNoYesYes89
852x38 4x42 vasopressin-ot_on010.6393YesNoNoNo77
862x46 3x42 vasopressin-ot_on013.8924NoNoNoYes98
872x46 2x50 vasopressin-ot_on015.4196NoNoNoYes99
883x30 4x57 vasopressin-ot_on013.1202NoYesNoNo77
895x36 E2 vasopressin-ot_on4.1332727.4668NoNoYesYes54
905x36 Lig vasopressin-ot_on028.3297NoNoYesYes50
91E1x50 E2 vasopressin-ot_on9.2820321.886YesYesYesYes74
92E2 E2x51 vasopressin-ot_on3.7655127.0183YesYesNoNo43
93E2x51 Lig vasopressin-ot_on027.8983NoNoYesYes30
943x37 5x43 vasopressin-ot_on010.0261YesYesNoYes65
955x43 Lig vasopressin-ot_on010.0488NoYesYesYes50
963x37 5x461 vasopressin-ot_on1.7235719.74YesYesNoNo65
976x44 6x48 vasopressin-ot_on3.26614.1081NoYesYesYes98
983x51 5x61 vasopressin-ot_on9.3039818.7237NoYesNoNo78
993x50 5x61 vasopressin-ot_on021.7214YesNoNoNo98
1003x50 5x58 vasopressin-ot_on022.8795YesNoYesYes99
1015x58 6x40 vasopressin-ot_on047.7461YesYesYesNo98
1025x47 6x48 vasopressin-ot_on012.5525NoYesYesYes88
1035x62 6x37 vasopressin-ot_on013.6823NoYesNoNo58
1046x58 7x34 vasopressin-ot_on1.5973213.2508NoNoYesNo54
1056x58 Lig vasopressin-ot_on015.482NoNoYesYes50
1062x40 I1 vasopressin-ot_on010.5711NoYesNoYes90
1075x461 6x48 vasopressin-ot_on018.8543NoNoYesYes58

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
1x281x31Shared9.616.150021
1x352x64Shared12.993.3750112
2x562x60vasopressin-ot_off5.1201111
2x563x32Shared11.523.841111
2x567x42Shared4.337.221112
2x56LigShared30.615.781110
2x607x38vasopressin-ot_off6.800111
3x293x32Shared8.147.4551011
3x294x65Shared17.3713.031011
3x29E2x50vasopressin-ot_off6.4701012
3x29Ligvasopressin-ot_off9.7301010
3x32LigShared16.325.0751110
3x333x37Shared6.094.90022
3x334x61Shared14.649.0950021
3x335x43vasopressin-ot_off5.7100021
3x366x48vasopressin-ot_off5.8201011
3x36Ligvasopressin-ot_off8.6701010
3x375x461Shared7.874.5150022
4x614x64vasopressin-ot_off5.4901112
4x614x65Shared5.868.7851111
4x615x39Shared6.767.8951112
4x61LigShared5.14.71110
4x644x65Shared6.283.771121
4x64E2Shared6.285.651122
4x645x39vasopressin-ot_off12.0901122
4x65E2x52Shared6.936.241012
4x65Ligvasopressin-ot_off5.601010
E2E2Shared48.9130.5451122
E2E2x51Shared15.6213.6851121
5x36E2Shared21.6716.210112
5x39E2vasopressin-ot_off6.1901022
5x395x43Shared7.259.071021
5x406x59Shared10.757.1550112
5x40LigShared5.475.460110
5x425x43Shared7.054.110021
6x446x48Shared10.0213.3050121
6x486x52Shared8.026.011112
6x487x41vasopressin-ot_off7.7801112
6x487x45Shared13.5613.561112
6x48Ligvasopressin-ot_off7.8601110
6x516x52Shared1510.721112
6x516x55Shared8.27.0251111
6x51LigShared9.336.271110
6x55LigShared10.218.771110
E3E3Shared8.394.8950122
7x297x32vasopressin-ot_off10.7100022
7x357x39vasopressin-ot_off4.2800111
1x351x39vasopressin-ot_off3.9800112
6x587x34Shared3.962.7050112
2x593x28vasopressin-ot_off3.5300122
6x557x34vasopressin-ot_off3.5101112
1x387x39Shared2.981.3850121
1x397x38vasopressin-ot_off2.8300121
1x357x35Shared2.734.90111
7x30E3vasopressin-ot_off1.5700012
3x283x29vasopressin-ot_off1.5200021
7x38Ligvasopressin-ot_on05.60110
7x39Ligvasopressin-ot_on03.690110
2x60Ligvasopressin-ot_on011.8350110
5x43Ligvasopressin-ot_on04.0950110
6x58Ligvasopressin-ot_on04.370110
E2x51Ligvasopressin-ot_on022.60110
7x35Ligvasopressin-ot_on06.9950110
1x35Ligvasopressin-ot_on07.280110
1x311x35vasopressin-ot_on03.980111
1x357x39vasopressin-ot_on03.9750111
1x397x39vasopressin-ot_on03.460121
2x532x56vasopressin-ot_on04.2950021
2x563x36vasopressin-ot_on010.8751111
2x603x32vasopressin-ot_on09.60111
3x375x43vasopressin-ot_on03.6750021
5x406x55vasopressin-ot_on03.430111
5x4616x48vasopressin-ot_on03.6750121
5x4616x52vasopressin-ot_on05.240122
5x476x48vasopressin-ot_on03.450021
6x517x41vasopressin-ot_on08.321112
6x557x38vasopressin-ot_on07.4751111
2x67NTvasopressin-ot_on05.9550021
1x31Ligvasopressin-ot_on05.4650110
5x36Ligvasopressin-ot_on08.1750110
7x34E3vasopressin-ot_on06.710122
2x592x60vasopressin-ot_on03.160121
2x593x32vasopressin-ot_on03.160121
1x32NTvasopressin-ot_on02.7650021
LigNTvasopressin-ot_on02.6651101
1x317x32vasopressin-ot_on02.3250112
6x587x29vasopressin-ot_on02.2950112
1x381x39vasopressin-ot_on01.3850122
7x30Ligvasopressin-ot_on00.6650010

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
vasopressin-ot_off ot_off
vasopressin-ot_on ot_on
v2_on
Network Difference
Value vasopressin-ot_off vasopressin-ot_on
Imin 4.28 3.375
Number of Linked Nodes 218 254
Number of Specific Nodes 6 (2.75%) 42  (16.54%)
Number of Shared Nodes 212 (97.25%) 212  (83.46%)
Number of Links 237 280
Number of Specific Links 110 (46.41%) 153  (54.64%)
Number of Shared Links 127 (53.59%) 127  (45.36%)
Number of Hubs 29 34
Number of Specific Hubs 17 (58.62%) 22  (64.71%)
Number of Shared Hubs 12 (41.38%) 12  (35.29%)
Average % Shared Neighbours (Jaccard) 32.82
Average % Shared Neighbours (Otsuka) 41.85
Average % Shared Neighbours (Overlap Coefficient) 52.01
Average % Shared Cliques (k3-6) 76.61
Graphlets Similarity 0.545992
Paths Difference
Value vasopressin-ot_off vasopressin-ot_on
Number Of Nodes in MetaPath 64 49
Specific Nodes in MetaPath 36 (56.25%) 21  (42.86%)
Shared Nodes in MetaPath 212 (97.25%) 212  (97.25%)
Number Of Links MetaPath 68 51
Specific Links in MetaPath 56 (82.35%) 39  (76.47%)
Shared Links in MetaPath 127 (53.59%) 127  (53.59%)
Number of Shortest Paths 37352 37897
Length Of Smallest Path 3 3
Average Path Length 13.0937 11.5664
Length of Longest Path 30 27
Minimum Path Strength 1.46 0.7425
Average Path Strength 7.24179 6.51027
Maximum Path Strength 18.645 16.4183
Minimum Path Correlation 0.7 0.7
Average Path Correlation 0.905957 0.90996
Maximum Path Correlation 0.99 0.99
Minimum % Of Corr. Nodes 3.84615 4.54545
Average % Of Corr. Nodes 37.7285 44.1157
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 45.9833 43.2655
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

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