CodeJIX
Name(1S,4R,5R,6S)-4-amino-2-oxabicyclo[3.1.0]hexane-4,6-dicarboxylic acid
Synonyms
Identifier
FormulaC7 H9 N O5
Molecular Weight187.15
SMILES
PubChem92460481
Formal Charge0
Total Atoms22
Total Chiral Atoms4
Total Bonds23
Total Aromatic Bonds0
Networks1
missing image

This ligand is also present in the following network:

Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8TR2 C Aminoacid Metabotropic Glutamate mGlu3; mGlu3 Rattus Norvegicus Ca; LY379268 Ca - 3.5 2024-07-31 doi.org/10.1101/2023.08.13.552748

A 2D representation of the interactions of JIX in 8TR2
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:P46 R:R:S149 7.13 1 No Yes 5 5 2 1
R:R:P46 W:W:?2 9.05 1 No Yes 5 0 2 2
R:R:R64 R:R:R68 10.66 1 Yes Yes 5 5 1 1
R:R:Q306 R:R:R64 19.86 1 No Yes 4 5 2 1
R:R:E387 R:R:R64 5.82 1 Yes Yes 6 5 2 1
L:L:?1 R:R:R64 13.78 1 Yes Yes 0 5 0 1
R:R:R68 R:R:S149 3.95 1 Yes Yes 5 5 1 1
R:R:R68 R:R:Y171 4.12 1 Yes Yes 5 7 1 2
R:R:A172 R:R:R68 4.15 1 Yes Yes 5 5 1 1
R:R:E387 R:R:R68 17.45 1 Yes Yes 6 5 2 1
R:R:K389 R:R:R68 6.19 1 Yes Yes 4 5 1 1
R:R:R68 R:R:V393 3.92 1 Yes No 5 7 1 2
L:L:?1 R:R:R68 9.85 1 Yes Yes 0 5 0 1
R:R:S100 R:R:Y150 6.36 0 No Yes 3 4 2 1
R:R:S149 R:R:Y171 6.36 1 Yes Yes 5 7 1 2
L:L:?1 R:R:S149 3.65 1 Yes Yes 0 5 0 1
R:R:S149 W:W:?2 2.76 1 Yes Yes 5 0 1 2
R:R:R277 R:R:Y150 18.52 1 Yes Yes 5 4 2 1
R:R:D279 R:R:Y150 4.6 1 No Yes 2 4 2 1
L:L:?1 R:R:Y150 4.75 1 Yes Yes 0 4 0 1
R:R:Y150 W:W:?2 4.31 1 Yes Yes 4 0 1 2
R:R:A172 R:R:Y171 5.34 1 Yes Yes 5 7 1 2
R:R:V393 R:R:Y171 6.31 1 No Yes 7 7 2 2
R:R:A172 R:R:K389 4.82 1 Yes Yes 5 4 1 1
L:L:?1 R:R:A172 3.83 1 Yes Yes 0 5 0 1
R:R:D194 R:R:T174 7.23 1 Yes No 8 8 2 2
R:R:D301 R:R:T174 2.89 1 Yes No 8 8 1 2
R:R:D194 R:R:Q197 9.14 1 Yes Yes 8 9 2 2
R:R:D194 R:R:Y222 8.05 1 Yes Yes 8 7 2 1
R:R:D194 R:R:F275 5.97 1 Yes Yes 8 7 2 2
R:R:Q197 R:R:S300 5.78 0 Yes No 9 8 2 2
R:R:D301 R:R:Q197 11.75 1 Yes Yes 8 9 1 2
R:R:F275 R:R:Y222 6.19 1 Yes Yes 7 7 2 1
R:R:S300 R:R:Y222 6.36 1 No Yes 8 7 2 1
R:R:D301 R:R:Y222 4.6 1 Yes Yes 8 7 1 1
R:R:G302 R:R:Y222 4.35 1 No Yes 6 7 1 1
L:L:?1 R:R:Y222 21.85 1 Yes Yes 0 7 0 1
R:R:F275 R:R:S300 7.93 1 Yes No 7 8 2 2
R:R:D279 R:R:R277 3.57 1 No Yes 2 5 2 2
R:R:D301 R:R:G302 3.35 1 Yes No 8 6 1 1
R:R:D301 R:R:L325 4.07 1 Yes Yes 8 5 1 2
R:R:D301 R:R:K389 4.15 1 Yes Yes 8 4 1 1
L:L:?1 R:R:D301 7.7 1 Yes Yes 0 8 0 1
L:L:?1 R:R:G302 2.77 1 Yes No 0 6 0 1
R:R:K389 R:R:L325 2.82 1 Yes Yes 4 5 1 2
R:R:F392 R:R:L325 4.87 1 Yes Yes 7 5 2 2
R:R:E387 R:R:K389 5.4 1 Yes Yes 6 4 2 1
R:R:F392 R:R:K389 3.72 1 Yes Yes 7 4 2 1
L:L:?1 R:R:K389 6.86 1 Yes Yes 0 4 0 1
StatisticsValue
Average Number Of Links9.00
Average Number Of Links With An Hub8.00
Average Interaction Strength8.34
Average Nodes In Shell26.00
Average Hubs In Shell18.00
Average Links In Shell49.00
Average Links Mediated by Hubs In Shell49.00

Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)

Location of the nodes interacting with this ligand (click to enlarge 🔍)

A 2D representation of the interactions of JIX in 8TR2
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
S:S:P46 S:S:S149 7.13 2 No Yes 5 5 2 1
S:S:P46 X:X:?3 9.05 2 No Yes 5 0 2 2
S:S:R64 S:S:R68 10.66 2 Yes Yes 5 5 1 1
S:S:Q306 S:S:R64 19.86 2 No Yes 4 5 2 1
S:S:E387 S:S:R64 5.82 2 Yes Yes 6 5 2 1
M:M:?1 S:S:R64 13.78 2 Yes Yes 0 5 0 1
S:S:R68 S:S:S149 3.95 2 Yes Yes 5 5 1 1
S:S:R68 S:S:Y171 4.12 2 Yes Yes 5 7 1 2
S:S:A172 S:S:R68 4.15 2 Yes Yes 5 5 1 1
S:S:E387 S:S:R68 17.45 2 Yes Yes 6 5 2 1
S:S:K389 S:S:R68 6.19 2 Yes Yes 4 5 1 1
S:S:R68 S:S:V393 3.92 2 Yes No 5 7 1 2
M:M:?1 S:S:R68 9.85 2 Yes Yes 0 5 0 1
S:S:S100 S:S:Y150 6.36 0 No Yes 3 4 2 1
S:S:S149 S:S:Y171 6.36 2 Yes Yes 5 7 1 2
M:M:?1 S:S:S149 3.65 2 Yes Yes 0 5 0 1
S:S:S149 X:X:?3 2.76 2 Yes Yes 5 0 1 2
S:S:R277 S:S:Y150 18.52 2 Yes Yes 5 4 2 1
S:S:D279 S:S:Y150 4.6 2 No Yes 2 4 2 1
M:M:?1 S:S:Y150 4.75 2 Yes Yes 0 4 0 1
S:S:Y150 X:X:?3 4.31 2 Yes Yes 4 0 1 2
S:S:A172 S:S:Y171 5.34 2 Yes Yes 5 7 1 2
S:S:V393 S:S:Y171 6.31 2 No Yes 7 7 2 2
S:S:A172 S:S:K389 4.82 2 Yes Yes 5 4 1 1
M:M:?1 S:S:A172 3.83 2 Yes Yes 0 5 0 1
S:S:D194 S:S:T174 7.23 2 Yes No 8 8 2 2
S:S:D301 S:S:T174 2.89 2 Yes No 8 8 1 2
S:S:D194 S:S:Q197 9.14 2 Yes Yes 8 9 2 2
S:S:D194 S:S:Y222 8.05 2 Yes Yes 8 7 2 1
S:S:D194 S:S:F275 5.97 2 Yes Yes 8 7 2 2
S:S:Q197 S:S:S300 5.78 0 Yes No 9 8 2 2
S:S:D301 S:S:Q197 11.75 2 Yes Yes 8 9 1 2
S:S:F275 S:S:Y222 6.19 2 Yes Yes 7 7 2 1
S:S:S300 S:S:Y222 6.36 2 No Yes 8 7 2 1
S:S:D301 S:S:Y222 4.6 2 Yes Yes 8 7 1 1
S:S:G302 S:S:Y222 4.35 2 No Yes 6 7 1 1
M:M:?1 S:S:Y222 21.85 2 Yes Yes 0 7 0 1
S:S:F275 S:S:S300 7.93 2 Yes No 7 8 2 2
S:S:D279 S:S:R277 3.57 2 No Yes 2 5 2 2
S:S:D301 S:S:G302 3.35 2 Yes No 8 6 1 1
S:S:D301 S:S:L325 4.07 2 Yes Yes 8 5 1 2
S:S:D301 S:S:K389 4.15 2 Yes Yes 8 4 1 1
M:M:?1 S:S:D301 7.7 2 Yes Yes 0 8 0 1
M:M:?1 S:S:G302 2.77 2 Yes No 0 6 0 1
S:S:K389 S:S:L325 2.82 2 Yes Yes 4 5 1 2
S:S:F392 S:S:L325 4.87 2 Yes Yes 7 5 2 2
S:S:E387 S:S:K389 5.4 2 Yes Yes 6 4 2 1
S:S:F392 S:S:K389 3.72 2 Yes Yes 7 4 2 1
M:M:?1 S:S:K389 6.86 2 Yes Yes 0 4 0 1
StatisticsValue
Average Number Of Links9.00
Average Number Of Links With An Hub8.00
Average Interaction Strength8.34
Average Nodes In Shell26.00
Average Hubs In Shell18.00
Average Links In Shell49.00
Average Links Mediated by Hubs In Shell49.00

Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)

Location of the nodes interacting with this ligand (click to enlarge 🔍)
StatisticsValue
Average Number Of Links9.00
Average Number Of Links With An Hub8.00
Average Interaction Strength8.34
Average Nodes In Shell26.00
Average Hubs In Shell18.00
Average Links In Shell49.00
Average Links Mediated by Hubs In Shell49.00

missing image


Physico-chemical properties of the nodes interacting with this ligand

(Click to enlarge 🔍)

missing image


Location of the nodes interacting with this ligand

(Click to enlarge 🔍)