CodeNZZ
Name(2Z)-3,7-dimethylocta-2,6-dien-1-ol
Synonymsnerol
Identifier(2~{Z})-3,7-dimethylocta-2,6-dien-1-ol
FormulaC10 H18 O
Molecular Weight154.249
SMILESCC(=CCC/C(=C\CO)/C)C
PubChem643820
Formal Charge0
Total Atoms29
Total Chiral Atoms0
Total Bonds28
Total Aromatic Bonds0
Networks1
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This ligand is also present in the following network:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6PH7 A Sensory Opsins Rhodopsin Bos taurus - Nerol Gt(CT) 2.9 2020-07-01 To be published

A 2D representation of the interactions of NZZ in 6PH7
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:E122 R:R:L125 3.98 1 Yes No 6 7 1 2
R:R:C167 R:R:E122 10.64 1 No Yes 5 6 2 1
R:R:E122 R:R:H211 6.15 1 Yes Yes 6 6 1 2
R:R:E122 W:W:?3 5.82 1 Yes Yes 6 0 1 0
R:R:L125 R:R:W265 13.67 0 No Yes 7 8 2 1
R:R:C167 R:R:H211 11.79 1 No Yes 5 6 2 2
R:R:Y191 R:R:Y192 15.89 1 Yes Yes 6 5 1 2
R:R:Y191 R:R:Y268 9.93 1 Yes No 6 6 1 1
R:R:A272 R:R:Y191 8.01 1 No Yes 5 6 1 1
R:R:Y191 W:W:?3 6.43 1 Yes Yes 6 0 1 0
R:R:F276 R:R:V204 19.66 0 No No 4 4 2 1
R:R:V204 W:W:?3 8.17 0 No Yes 4 0 1 0
R:R:M207 W:W:?3 10.86 0 No Yes 5 0 1 0
R:R:F208 R:R:F212 6.43 0 No Yes 5 8 2 1
R:R:A269 R:R:F212 5.55 0 No Yes 7 8 2 1
R:R:F212 W:W:?3 16.04 0 Yes Yes 8 0 1 0
R:R:F261 R:R:W265 9.02 0 No Yes 9 8 2 1
R:R:C264 R:R:W265 11.75 0 No Yes 8 8 2 1
R:R:W265 W:W:?3 5 0 Yes Yes 8 0 1 0
R:R:P291 R:R:Y268 6.95 0 No No 6 6 2 1
R:R:Y268 W:W:?3 7.72 1 No Yes 6 0 1 0
R:R:A272 W:W:?3 6.92 1 No Yes 5 0 1 0
R:R:F212 R:R:L266 2.44 0 Yes No 8 6 1 2
StatisticsValue
Average Number Of Links8.00
Average Number Of Links With An Hub4.00
Average Interaction Strength8.37
Average Nodes In Shell20.00
Average Hubs In Shell7.00
Average Links In Shell23.00
Average Links Mediated by Hubs In Shell21.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
StatisticsValue
Average Number Of Links8.00
Average Number Of Links With An Hub4.00
Average Interaction Strength8.37
Average Nodes In Shell20.00
Average Hubs In Shell7.00
Average Links In Shell23.00
Average Links Mediated by Hubs In Shell21.00

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Physico-chemical properties of the nodes interacting with this ligand

(Click to enlarge 🔍)

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Location of the nodes interacting with this ligand

(Click to enlarge 🔍)