CodeOEM
NameN-methyl-D-aspartic acid
Synonyms
Identifier(2R)-2-(methylamino)butanedioic acid
FormulaC5 H9 N O4
Molecular Weight147.129
SMILESCN[C@H](CC(=O)O)C(=O)O
PubChem22880
Formal Charge0
Total Atoms19
Total Chiral Atoms1
Total Bonds18
Total Aromatic Bonds0
Networks1
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This ligand is also present in the following network:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7F8X A Peptide Cholecystokinin CCKA Homo sapiens NN9056 - - 3 2021-12-29 10.1038/s41589-021-00866-8

A 2D representation of the interactions of OEM in 7F8X
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:T118 R:R:Y176 3.75 0 No Yes 6 7 2 1
R:R:S180 R:R:T118 6.4 0 No No 6 6 2 2
L:L:?6 R:R:M121 4.01 1 Yes Yes 0 7 1 2
L:L:?8 R:R:M121 8.45 1 Yes Yes 0 7 1 2
L:L:?9 R:R:M121 14.09 1 Yes Yes 0 7 1 2
R:R:F198 R:R:Y176 19.6 1 Yes Yes 5 7 1 1
R:R:W209 R:R:Y176 7.72 1 Yes Yes 8 7 2 1
L:L:?7 R:R:Y176 7.89 1 Yes Yes 0 7 0 1
L:L:?8 R:R:Y176 10.01 1 Yes Yes 0 7 1 1
R:R:F198 R:R:S180 5.28 1 Yes No 5 6 1 2
R:R:F198 R:R:L200 6.09 1 Yes Yes 5 4 1 2
R:R:F198 R:R:W209 4.01 1 Yes Yes 5 8 1 2
L:L:?7 R:R:F198 4.55 1 Yes Yes 0 5 0 1
R:R:H210 R:R:W209 4.23 0 Yes Yes 6 8 2 2
R:R:H210 R:R:N333 7.65 0 Yes Yes 6 7 2 1
R:R:I329 R:R:N333 7.08 1 No Yes 7 7 2 1
R:R:I329 R:R:L356 4.28 1 No No 7 6 2 2
L:L:?8 R:R:I329 3.66 1 Yes No 0 7 1 2
L:L:?8 R:R:F330 10.4 1 Yes Yes 0 7 1 2
L:L:W5 R:R:N333 6.78 1 Yes Yes 0 7 2 1
L:L:?7 R:R:N333 7.18 1 Yes Yes 0 7 0 1
L:L:?8 R:R:N333 5.86 1 Yes Yes 0 7 1 1
L:L:?8 R:R:L356 4.73 1 Yes No 0 6 1 2
L:L:?9 R:R:Y360 5.84 1 Yes Yes 0 7 1 2
L:L:?2 L:L:?6 8.76 1 Yes Yes 0 0 2 1
L:L:?6 L:L:W5 9.69 1 Yes Yes 0 0 1 2
L:L:?6 L:L:?7 23.47 1 Yes Yes 0 0 1 0
L:L:?6 L:L:?8 11.18 1 Yes Yes 0 0 1 1
L:L:?7 L:L:?8 34.46 1 Yes Yes 0 0 0 1
L:L:?7 L:L:?9 5.16 1 Yes Yes 0 0 0 1
L:L:?8 L:L:?9 20.62 1 Yes Yes 0 0 1 1
StatisticsValue
Average Number Of Links6.00
Average Number Of Links With An Hub6.00
Average Interaction Strength13.78
Average Nodes In Shell19.00
Average Hubs In Shell15.00
Average Links In Shell31.00
Average Links Mediated by Hubs In Shell29.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
StatisticsValue
Average Number Of Links6.00
Average Number Of Links With An Hub6.00
Average Interaction Strength13.78
Average Nodes In Shell19.00
Average Hubs In Shell15.00
Average Links In Shell31.00
Average Links Mediated by Hubs In Shell29.00

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Physico-chemical properties of the nodes interacting with this ligand

(Click to enlarge 🔍)

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Location of the nodes interacting with this ligand

(Click to enlarge 🔍)