CodeUBL
Name[(2R)-2-oxidanyl-3-phosphonooxy-propyl] (Z)-octadec-9-enoate
Synonyms
Identifier
FormulaC21 H41 O7 P
Molecular Weight436.52
SMILES
PubChem5311263
Formal Charge0
Total Atoms70
Total Chiral Atoms1
Total Bonds69
Total Aromatic Bonds0
Networks4
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This ligand is also present in the following 4 networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8IZB A Orphan Orphan GPR174 Homo Sapiens Lysophosphatidylserine - Gs/Beta1/Gamma2 3.06 2023-11-01 10.1371/journal.pbio.3002387

A 2D representation of the interactions of UBL in 8IZB
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 L:L:S2 10.56 3 Yes Yes 0 0 0 1
L:L:?1 R:R:F95 3.43 3 Yes Yes 0 5 0 1
L:L:?1 R:R:Y99 12.37 3 Yes Yes 0 4 0 1
L:L:?1 R:R:Y103 9.9 3 Yes Yes 0 7 0 1
L:L:?1 R:R:I144 7.03 3 Yes No 0 4 0 1
L:L:?1 R:R:A148 4.43 3 Yes No 0 4 0 1
L:L:?1 R:R:F152 17.99 3 Yes Yes 0 3 0 1
L:L:?1 R:R:R156 8.55 3 Yes Yes 0 5 0 1
L:L:?1 R:R:M185 5.97 3 Yes No 0 4 0 1
L:L:?1 R:R:I192 4.02 3 Yes No 0 4 0 1
L:L:?1 R:R:F250 13.71 3 Yes Yes 0 5 0 1
L:L:?1 R:R:F254 6.85 3 Yes Yes 0 4 0 1
L:L:?1 R:R:K257 8.93 3 Yes Yes 0 5 0 1
L:L:?1 R:R:H274 5.43 3 Yes Yes 0 5 0 1
L:L:S2 R:R:Y22 3.82 3 Yes Yes 0 6 1 2
L:L:S2 R:R:R75 5.27 3 Yes Yes 0 6 1 2
L:L:S2 R:R:F95 3.96 3 Yes Yes 0 5 1 1
L:L:S2 R:R:K98 6.12 3 Yes Yes 0 6 1 2
L:L:S2 R:R:Y99 7.63 3 Yes Yes 0 4 1 1
R:R:L278 R:R:Y22 7.03 0 Yes Yes 5 6 2 2
R:R:K98 R:R:R75 12.38 3 Yes Yes 6 6 2 2
R:R:F169 R:R:R75 20.31 3 Yes Yes 4 6 2 2
R:R:F95 R:R:Y99 11.35 3 Yes Yes 5 4 1 1
R:R:F95 R:R:R156 5.34 3 Yes Yes 5 5 1 1
R:R:F169 R:R:F95 5.36 3 Yes Yes 4 5 2 1
R:R:K98 R:R:L278 5.64 3 Yes Yes 6 5 2 2
R:R:F152 R:R:Y99 18.57 3 Yes Yes 3 4 1 1
R:R:L278 R:R:Y99 3.52 0 Yes Yes 5 4 2 1
R:R:M102 R:R:Y103 5.99 0 No Yes 7 7 2 1
R:R:M102 R:R:Y246 5.99 0 No Yes 7 6 2 2
R:R:C149 R:R:Y103 4.03 3 No Yes 7 7 2 1
R:R:F152 R:R:Y103 5.16 3 Yes Yes 3 7 1 1
R:R:H247 R:R:Y103 6.53 3 Yes Yes 8 7 2 1
R:R:C149 R:R:F152 4.19 3 No Yes 7 3 2 1
R:R:F254 R:R:L155 4.87 0 Yes No 4 4 1 2
R:R:L172 R:R:R156 4.86 0 No Yes 4 5 2 1
R:R:K257 R:R:R156 11.14 3 Yes Yes 5 5 1 1
R:R:K257 R:R:T174 6.01 3 Yes No 5 3 1 2
R:R:F254 R:R:S182 6.61 0 Yes No 4 4 1 2
R:R:F254 R:R:M186 6.22 0 Yes No 4 4 1 2
R:R:E190 R:R:H247 11.08 3 Yes Yes 5 8 2 2
R:R:E190 R:R:F250 5.83 3 Yes Yes 5 5 2 1
R:R:E190 R:R:P251 7.86 3 Yes No 5 6 2 2
R:R:H247 R:R:Y246 9.8 3 Yes Yes 8 6 2 2
R:R:F250 R:R:Y246 6.19 3 Yes Yes 5 6 1 2
R:R:H274 R:R:Y246 7.62 0 Yes Yes 5 6 1 2
R:R:L278 R:R:Y246 7.03 0 Yes Yes 5 6 2 2
R:R:H274 R:R:S249 9.76 0 Yes No 5 4 1 2
R:R:F250 R:R:P251 5.78 3 Yes No 5 6 1 2
R:R:D253 R:R:K257 6.91 0 No Yes 4 5 2 1
R:R:D253 R:R:H274 25.21 0 No Yes 4 5 2 1
R:R:F254 R:R:S258 3.96 0 Yes No 4 2 1 2
R:R:G193 R:R:Y103 2.9 0 No Yes 5 7 2 1
R:R:L151 R:R:M185 2.83 0 No No 8 4 2 1
L:L:?1 R:R:G189 2.41 3 Yes No 0 5 0 1
R:R:G189 R:R:I188 1.76 0 No No 5 4 1 2
StatisticsValue
Average Number Of Links15.00
Average Number Of Links With An Hub10.00
Average Interaction Strength8.11
Average Nodes In Shell38.00
Average Hubs In Shell19.00
Average Links In Shell56.00
Average Links Mediated by Hubs In Shell54.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8WRB A Orphan Orphan GPR34 Homo Sapiens Lysophosphatidylserine - Gi1/Beta1/Gamma2 2.91 2023-11-08 10.1371/journal.pbio.3002387

A 2D representation of the interactions of UBL in 8WRB
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?2 L:L:S1 10.56 2 Yes Yes 0 0 0 1
L:L:S1 R:R:Y135 6.36 2 Yes Yes 0 5 1 1
L:L:S1 R:R:R286 3.95 2 Yes Yes 0 6 1 2
L:L:S1 R:R:N309 4.47 2 Yes Yes 0 5 1 2
L:L:?2 R:R:T132 5.18 2 Yes No 0 5 0 1
L:L:?2 R:R:Y135 15.67 2 Yes Yes 0 5 0 1
L:L:?2 R:R:A182 3.33 2 Yes No 0 7 0 1
L:L:?2 R:R:M189 10.94 2 Yes No 0 4 0 1
L:L:?2 R:R:F205 3.43 2 Yes Yes 0 4 0 1
L:L:?2 R:R:R208 7.69 2 Yes Yes 0 5 0 1
L:L:?2 R:R:F219 3.43 2 Yes Yes 0 5 0 1
L:L:?2 R:R:N220 6.76 2 Yes No 0 4 0 1
L:L:?2 R:R:L223 8.76 2 Yes No 0 5 0 1
L:L:?2 R:R:M226 4.97 2 Yes No 0 5 0 1
R:R:F205 R:R:R110 18.17 0 Yes Yes 4 7 1 2
R:R:K128 R:R:R208 7.43 2 No Yes 8 5 2 1
R:R:F205 R:R:G131 4.52 0 Yes No 4 6 1 2
R:R:F186 R:R:T132 5.19 2 Yes No 7 5 2 1
R:R:I190 R:R:T132 4.56 2 Yes No 5 5 2 1
R:R:Y135 R:R:Y282 5.96 2 Yes Yes 5 6 1 2
R:R:L313 R:R:Y135 5.86 2 Yes Yes 5 5 2 1
R:R:L223 R:R:Y139 7.03 2 No No 5 7 1 2
R:R:A182 R:R:I140 3.25 0 No No 7 7 1 2
R:R:I143 R:R:M226 5.83 0 No No 5 5 2 1
R:R:F186 R:R:I190 6.28 2 Yes Yes 7 5 2 2
R:R:E216 R:R:M189 5.41 2 Yes No 3 4 2 1
R:R:F219 R:R:M189 8.71 2 Yes No 5 4 1 1
R:R:C204 R:R:F205 11.17 16 No Yes 9 4 2 1
R:R:H206 R:R:R208 7.9 0 No Yes 5 5 2 1
R:R:K210 R:R:R208 4.95 2 Yes Yes 3 5 2 1
R:R:E216 R:R:R208 5.82 2 Yes Yes 3 5 2 1
R:R:E216 R:R:K210 12.15 2 Yes Yes 3 3 2 2
R:R:F219 R:R:L223 6.09 2 Yes No 5 5 1 1
R:R:N220 R:R:R286 12.05 2 No Yes 4 6 1 2
R:R:I290 R:R:N220 4.25 2 No No 5 4 2 1
R:R:R286 R:R:Y282 12.35 2 Yes Yes 6 6 2 2
R:R:N309 R:R:Y282 6.98 2 Yes Yes 5 6 2 2
R:R:L313 R:R:Y282 7.03 2 Yes Yes 5 6 2 2
R:R:I290 R:R:R286 3.76 2 No Yes 5 6 2 2
R:R:N309 R:R:R286 7.23 2 Yes Yes 5 6 2 2
R:R:F219 R:R:G185 1.51 2 Yes No 5 4 1 2
R:R:I218 R:R:I222 1.47 0 No No 5 5 2 1
L:L:?2 R:R:I222 1 2 Yes No 0 5 0 1
L:L:?2 R:R:L229 0.97 2 Yes No 0 5 0 1
StatisticsValue
Average Number Of Links13.00
Average Number Of Links With An Hub5.00
Average Interaction Strength6.36
Average Nodes In Shell33.00
Average Hubs In Shell15.00
Average Links In Shell44.00
Average Links Mediated by Hubs In Shell39.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
StatisticsValue
Average Number Of Links14.00
Average Number Of Links With An Hub7.50
Average Interaction Strength7.22
Average Nodes In Shell34.75
Average Hubs In Shell16.75
Average Links In Shell50.00
Average Links Mediated by Hubs In Shell46.00

missing image


Physico-chemical properties of the nodes interacting with this ligand

(Click to enlarge 🔍)

missing image


Location of the nodes interacting with this ligand

(Click to enlarge 🔍)