CodeVF0
Name(2R)-2-azanyl-3-[oxidanyl-[(2R)-2-oxidanyl-3-tetradec-9-enoyloxy-propoxy]phosphoryl]oxy-propanoic acid
Synonyms
Identifier(2~{R})-2-azanyl-3-[oxidanyl-[(2~{R})-2-oxidanyl-3-tetradec-9-enoyloxy-propoxy]phosphoryl]oxy-propanoic acid
FormulaC20 H38 N O9 P
Molecular Weight467.491
SMILESCCCCC=CCCCCCCCC(=O)OC[C@H](COP(=O)(O)OC[C@H](C(=O)O)N)O
PubChem
Formal Charge0
Total Atoms69
Total Chiral Atoms2
Total Bonds68
Total Aromatic Bonds0
Networks1
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This ligand is also present in the following network:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8K4N A Orphan A orphans GPR34 Homo Sapiens VF0 - Gi1/Beta1/Gamma2 2.83 2023-10-25 To be published

A 2D representation of the interactions of VF0 in 8K4N
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:F205 R:R:R110 12.83 0 Yes No 4 7 1 2
R:R:T132 R:R:V129 6.35 3 No No 5 5 1 2
R:R:F186 R:R:V129 5.24 3 Yes No 7 5 2 2
R:R:F205 R:R:V130 3.93 0 Yes No 4 5 1 2
R:R:F186 R:R:T132 6.49 3 Yes No 7 5 2 1
L:L:?1 R:R:T132 4.43 3 Yes No 0 5 0 1
R:R:Y135 R:R:Y139 2.98 3 Yes No 5 7 1 2
R:R:Y135 R:R:Y282 5.96 3 Yes Yes 5 6 1 2
R:R:R286 R:R:Y135 4.12 3 Yes Yes 6 5 1 1
L:L:?1 R:R:Y135 29.06 3 Yes Yes 0 5 0 1
R:R:L223 R:R:Y139 5.86 0 No No 5 7 1 2
L:L:?1 R:R:L181 4.16 3 Yes No 0 4 0 1
R:R:E216 R:R:M189 4.06 0 Yes No 3 4 2 1
R:R:F219 R:R:M189 4.98 0 Yes No 5 4 2 1
L:L:?1 R:R:M189 4.25 3 Yes No 0 4 0 1
R:R:C204 R:R:F205 5.59 0 No Yes 9 4 2 1
L:L:?1 R:R:F205 3.66 3 Yes Yes 0 4 0 1
R:R:H206 R:R:R208 10.16 0 No No 5 5 2 1
L:L:?1 R:R:R208 9.13 3 Yes No 0 5 0 1
R:R:F219 R:R:L223 4.87 0 Yes No 5 5 2 1
R:R:N220 R:R:R286 14.46 3 No Yes 4 6 1 1
R:R:I290 R:R:N220 11.33 3 No No 5 4 2 1
L:L:?1 R:R:N220 11.35 3 Yes No 0 4 0 1
L:L:?1 R:R:L223 8.32 3 Yes No 0 5 0 1
R:R:R286 R:R:V224 2.62 3 Yes No 6 4 1 2
R:R:R286 R:R:Y282 11.32 3 Yes Yes 6 6 1 2
R:R:N309 R:R:Y282 10.47 3 Yes Yes 5 6 2 2
R:R:R286 R:R:Y289 12.35 3 Yes Yes 6 4 1 1
R:R:I290 R:R:R286 2.51 3 No Yes 5 6 2 1
R:R:N309 R:R:R286 4.82 3 Yes Yes 5 6 2 1
L:L:?1 R:R:R286 13.69 3 Yes Yes 0 6 0 1
R:R:Q293 R:R:Y289 13.53 0 No Yes 4 4 2 1
R:R:V305 R:R:Y289 5.05 0 No Yes 4 4 2 1
R:R:N309 R:R:Y289 11.63 3 Yes Yes 5 4 2 1
L:L:?1 R:R:Y289 11.45 3 Yes Yes 0 4 0 1
StatisticsValue
Average Number Of Links10.00
Average Number Of Links With An Hub4.00
Average Interaction Strength9.95
Average Nodes In Shell26.00
Average Hubs In Shell10.00
Average Links In Shell35.00
Average Links Mediated by Hubs In Shell31.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
StatisticsValue
Average Number Of Links10.00
Average Number Of Links With An Hub4.00
Average Interaction Strength9.95
Average Nodes In Shell26.00
Average Hubs In Shell10.00
Average Links In Shell35.00
Average Links Mediated by Hubs In Shell31.00

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Physico-chemical properties of the nodes interacting with this ligand

(Click to enlarge 🔍)

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Location of the nodes interacting with this ligand

(Click to enlarge 🔍)