Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y207 6.4525405
2R:R:G213 2.115404
3R:R:F247 5.4875486
4R:R:Y266 4.605409
5R:R:R269 4.686519
6R:R:I272 6.35417
7R:R:Y278 5.7145119
8R:R:R288 3.1625469
9R:R:H293 5.6075466
10R:R:Y307 9.1825456
11R:R:T310 2.7525406
12R:R:T316 1.585408
13R:R:F319 5.125409
14R:R:Y323 7.825409
15R:R:F324 5.12408
16R:R:M327 5.86754139
17R:R:W332 9.15509
18R:R:W340 5.618539
19R:R:F341 5.88408
20R:R:W348 6.7725409
21R:R:I353 3.2654109
22R:R:D382 4.5875458
23R:R:I389 4.525407
24R:R:Y391 4.136505
25R:R:Q395 9.8475456
26R:R:L400 4.975408
27R:R:F403 5.2985148
28R:R:Y411 6.4985138
29R:R:L419 4.516538
30R:R:M447 3.315409
31R:R:I450 3.9375428
32R:R:Y457 10.0254119
33R:R:Q472 5.1525445
34R:R:Y500 7.398576
35R:R:K506 8.11409
36R:R:M509 5.8825408
37R:R:W520 5.516529
38R:R:W530 5.375409
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:P385 R:R:Q224 19.99294.74NoNo075
2R:R:D384 R:R:P385 21.18013.22NoNo097
3R:R:D384 R:R:N394 23.40025.39NoNo097
4R:R:D382 R:R:N394 22.55335.39YesNo087
5R:R:D382 R:R:Y307 14.19923.45YesYes586
6R:R:L206 R:R:Y307 32.25694.69NoYes036
7R:R:L206 R:R:V210 19.23314.47NoNo036
8R:R:T212 R:R:V210 18.08544.76NoNo056
9R:R:P205 R:R:Y207 12.23636.95NoYes035
10R:R:L206 R:R:P205 13.42363.28NoNo033
11R:R:E479 R:R:T212 12.22841.41NoNo065
12R:R:E479 R:R:G213 11.03333.27NoYes064
13R:R:G388 R:R:H293 10.18649.53NoYes696
14R:R:A387 R:R:G388 20.38071.95NoNo089
15R:R:A387 R:R:I389 62.64596.5NoYes087
16R:R:D384 R:R:I389 38.79854.2NoYes097
17R:R:F227 R:R:Q224 10.21013.51NoNo085
18R:R:W238 R:R:W242 14.274413.12NoNo098
19R:R:F508 R:R:W242 24.057122.05NoNo088
20R:R:F508 R:R:L505 26.42372.44NoNo087
21R:R:L505 R:R:M509 27.59519.9NoYes078
22R:R:C467 R:R:M509 38.87373.24NoYes088
23R:R:C467 R:R:K506 39.9588.08NoYes089
24R:R:K506 R:R:Y507 43.16364.78YesNo098
25R:R:A387 R:R:Y507 46.29784NoNo088
26R:R:F285 R:R:I389 22.81063.77NoYes077
27R:R:F285 R:R:S243 20.49152.64NoNo078
28R:R:L286 R:R:S243 18.22793NoNo058
29R:R:F247 R:R:L286 16.02753.65YesNo065
30R:R:F247 R:R:S251 12.366910.57YesNo866
31R:R:I389 R:R:Y391 77.73953.63YesYes075
32R:R:Y323 R:R:Y391 73.3316.95YesYes095
33R:R:M327 R:R:Y323 10011.97YesYes099
34R:R:M327 R:R:Y411 97.82343.59YesYes1398
35R:R:I331 R:R:Y411 87.518310.88NoYes068
36R:R:A364 R:R:I331 87.11461.62NoNo096
37R:R:A364 R:R:I335 86.71891.62NoNo096
38R:R:I335 R:R:W332 86.32324.7NoYes069
39R:R:P270 R:R:W332 64.88582.7NoYes099
40R:R:L336 R:R:P270 45.60929.85NoNo099
41R:R:I271 R:R:L336 44.7942.85NoNo099
42R:R:I271 R:R:W520 42.11093.52NoYes299
43R:R:S251 R:R:T252 11.18371.6NoNo066
44R:R:P270 R:R:R269 24.06512.88NoYes099
45R:R:I272 R:R:R269 22.16552.51YesYes179
46R:R:F273 R:R:W332 22.296124.05NoYes079
47R:R:F273 R:R:R269 21.50073.21NoYes079
48R:R:F264 R:R:I272 14.19925.02NoYes197
49R:R:D260 R:R:R263 10.202215.48NoNo089
50R:R:F264 R:R:R263 12.23247.48NoNo099
51R:R:R265 R:R:R269 20.38863.2NoYes169
52R:R:R265 R:R:Y266 18.87294.12NoYes069
53R:R:I353 R:R:Y266 10.58213.63YesYes099
54R:R:I450 R:R:W520 36.11143.52YesYes289
55R:R:S330 R:R:Y411 20.04433.82NoYes088
56R:R:S330 R:R:Y457 18.93622.54NoYes089
57R:R:Y278 R:R:Y457 10.95412.98YesYes1199
58R:R:F319 R:R:Y323 18.35057.22YesYes099
59R:R:C390 R:R:F319 21.55612.79NoYes099
60R:R:V392 R:R:Y391 10.0363.79NoYes095
61R:R:C315 R:R:C390 14.35757.28NoNo099
62R:R:C315 R:R:T310 13.07531.69NoYes096
63R:R:F403 R:R:Y323 29.06335.16YesYes089
64R:R:I450 R:R:M447 35.86614.37YesYes089
65R:R:M447 R:R:W340 27.24684.65YesYes099
66R:R:G422 R:R:W340 18.04194.22NoYes099
67R:R:F341 R:R:G422 13.59373.01YesNo089
68R:R:F403 R:R:S399 27.26272.64YesNo1487
69R:R:N396 R:R:Q395 24.72592.64NoYes076
70R:R:N396 R:R:S399 26.35648.94NoNo077
71R:R:V404 R:R:Y391 22.19323.79NoYes085
72R:R:L400 R:R:V404 19.69212.98YesNo088
73R:R:L400 R:R:R475 13.30092.43YesNo086
74R:R:L397 R:R:R475 12.07013.64NoNo046
75R:R:I463 R:R:M509 10.47535.83NoYes058
76R:R:Q395 R:R:Y307 20.143322.55YesYes566
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 6WW2
Class F
SubFamily Protein
Type Frizzled
SubType FZD5
Species Homo sapiens
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 3.7
Date 2020-08-19
D.O.I. 10.7554/eLife.58464
Net Summary
Imin 2.54
Number of Linked Nodes 290
Number of Links 318
Number of Hubs 38
Number of Links mediated by Hubs 144
Number of Communities 15
Number of Nodes involved in Communities 53
Number of Links involved in Communities 58
Path Summary
Number Of Nodes in MetaPath 77
Number Of Links MetaPath 76
Number of Shortest Paths 51089
Length Of Smallest Path 3
Average Path Length 15.5595
Length of Longest Path 36
Minimum Path Strength 1.21
Average Path Strength 5.27949
Maximum Path Strength 18.115
Minimum Path Correlation 0.7
Average Path Correlation 0.944635
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.44828
Average % Of Corr. Nodes 54.4831
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 39.8685
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ13467
Sequence
>6WW2_Chain_R
REPFVPILK ESHPLYNKV RTGQVPNCA VPCYQPSFS ADERTFATF 
WIGLWSVLC FISTSTTVA TFLIDMERF RYPERPIIF LSACYLCVS 
LGFLVRLVV GHASVACSR EHNHIHYET TGPALCTIV FLLVYFFGM 
ASSIWWVIL SLTWFLAAG MKWGNEAIA GYAQYFHLA AWLIPSVKS 
ITALALSSV DGDPVAGIC YVGNQNLNS LRGFVLGPL VLYLLVGTL 
FLLAGFVSL FRDKLEKLM IRIGIFTLL YTVPASIVV ACYLYEQHY 
RESWEAALT CACEYWVLM LKYFMCLVV GITSGVWIW SGKTVESWR 
RFTSR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 6WW2.zip



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