Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

All columns can be sorted in ascending/descending alphabetical order, clicking on the corresponding column header.

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

All columns can be sorted in ascending/descending alphabetical order, clicking on the corresponding column header.

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1Node2LinkStrengthCommIsNode1Hub?IsNode2Hub?Node1ConsNode2ConsNode1ShellNode2Shell
2x532x572.770YesYes4421
2x533x366.870YesYes4822
2x563x327.360NoYes4421
2x573x323.423YesYes4411
2x577x438.533YesYes4412
2x57Lig2.883YesYes4010
2x602x644.390NoNo4412
2x60Lig18.090NoYes4010
3x293x322.893NoYes2411
3x295x425.053NoNo2412
3x29Lig4.883NoYes2010
3x323x3610.173YesYes4812
3x32Lig34.753YesYes4010
3x365x476.813YesYes8522
5x36E36.733NoYes2221
5x39E33.620NoYes3221
5x435x472.920NoYes2512
5x43Lig3.070NoYes2010
6x587x383.440NoYes5312
6x58Lig3.120NoYes5010
E3E35.33YesYes2211
7x357x3911.660NoNo1321
7x39Lig9.190NoYes3010
E3Lig1.693YesYes2010
5x436x591.590NoNo2312
7x32E31.533NoYes5221

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

Consensus Members
Id Members
gs_taste 7XP6-T2R46-Strychnine-chim(Gs-CtGt3)/&β;1/&γ;2
Net Summary
Imin 2.51
Number of Linked Nodes 829
Number of Links 1098
Number of Hubs 212
Number of Links mediated by Hubs 755
Number of Communities 20
Number of Nodes involved in Communities 325
Number of Links involved in Communities 497
Path Summary
Number Of Nodes in MetaPath 127
Number Of Links MetaPath 126
Number of Shortest Paths 1145162
Length Of Smallest Path 3
Average Path Length 23.4514
Length of Longest Path 58
Minimum Path Strength 1.155
Average Path Strength 5.61691
Maximum Path Strength 26.42
Minimum Path Correlation 0.7
Average Path Correlation 0.980855
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 3.125
Average % Of Corr. Nodes 51.3381
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 55.2385
Maximum Path Hubs % 100

Details about the values in these tables can be found in the corresponding documentation page .




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download gs_class-t.zip



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