Orange: nodes, hubs and links specific of angiotensin_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of angiotensin_on network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner angiotensin_off Avg Int. Strength angiotensin_on Avg Int. Strength angiotensin_off Num Of Links angiotensin_on Num Of Links ConSurf
11x43 angiotensin_off6.186257.70667436
21x47 angiotensin_off3.643.14436
3I1x50 angiotensin_off3.8434.27527
42x40 angiotensin_off3.84755.15667438
52x44 angiotensin_off6.788754.19667435
62x53 angiotensin_off10.9751.56516
73x50 angiotensin_off4.677.715429
85x49 angiotensin_off5.361.44416
95x54 angiotensin_off6.42254.83428
106x30 angiotensin_off6.251256.51333436
116x37 angiotensin_off5.231254.75427
126x44 angiotensin_off6.754.41667539
136x63 angiotensin_off2.7351.49411
14E3 angiotensin_off5.60256.76667431
157x36 angiotensin_off2.562.94416
167x42 angiotensin_off7.4926.34333537
177x46 angiotensin_off11.61124.63419
187x52 angiotensin_off5.167.28428
19Lig Shared12.38513.04249210
20NT Shared8.3220.92141074
211x35 Shared5.11753.885466
221x39 Shared6.7145.398557
231x60 Shared2.546256.816454
242x41 Shared1.9553.2175446
252x42 Shared5.9295.04557
262x50 Shared8.08755.61459
272x57 Shared4.95.73448
282x60 Shared10.37.2025547
29E1 Shared5.6858.076554
30E1x50 Shared8.1691711.054659
31E1x52 Shared8.8267.568556
323x34 Shared4.9184.4075545
333x51 Shared6.3387.086558
344x50 Shared4.878755.7175449
35E2 Shared13.886429.84311104
365x47 Shared7.23755.795448
375x50 Shared2.76753.1325448
385x58 Shared7.35255.368459
396x45 Shared9.4058.585445
406x48 Shared9.661254.906458
411x28 angiotensin_on9.166677.3075344
421x46 angiotensin_on3.421.8025148
431x53 angiotensin_on7.2652.73249
442x46 angiotensin_on3.764.3125249
452x63 angiotensin_on6.497.5575345
463x37 angiotensin_on5.511675.62357
47I2x57 angiotensin_on4.85.82156
48E2x52 angiotensin_on11.16178.0725344
495x43 angiotensin_on3.111.98245
505x62 angiotensin_on5.208335.268355
51I3 angiotensin_on03.99875080
526x34 angiotensin_on6.40256.678256
536x43 angiotensin_on6.896677.275346
546x49 angiotensin_on2.946675.2025345
556x51 angiotensin_on7.883336.46366
567x53 angiotensin_on7.9455.706359
578x50 angiotensin_on1.414.1075248
588x53 angiotensin_on4.587.37265
   
Orange: nodes, hubs and links specific of angiotensin_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of angiotensin_on network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner angiotensin_off Recurrence angiotensin_on Recurrence angiotensin_off Hub1? angiotensin_on Hub1? angiotensin_off Hub2? angiotensin_on Hub2? ConSurf1 ConSurf2
11x39 Lig angiotensin_off17.58750YesYesYesYes70
27x42 Lig angiotensin_off75.7010YesNoYesYes70
31x35 1x39 angiotensin_off13.58950.684913YesYesYesYes67
4E3 NT angiotensin_off16.61420YesNoYesYes14
5E2x52 Lig angiotensin_off43.61958.94339NoYesYesYes40
6E2 E2x52 angiotensin_off38.17070.492611YesYesNoYes44
7E2 NT angiotensin_off28.52850.297674YesYesYesYes44
81x43 2x57 angiotensin_off17.25467.88704YesNoYesYes68
92x53 2x57 angiotensin_off23.930YesNoYesYes68
102x53 7x46 angiotensin_off29.52350YesNoYesNo69
112x50 7x46 angiotensin_off34.60692.57369YesYesYesNo99
126x48 7x42 angiotensin_off73.24070YesYesYesNo87
133x43 6x44 angiotensin_off47.2810NoNoYesNo89
143x43 6x41 angiotensin_off46.97350NoNoNoNo88
155x58 6x41 angiotensin_off46.64791.06425YesYesNoNo98
163x46 6x37 angiotensin_off69.60090NoNoYesNo97
172x43 3x46 angiotensin_off12.46431.7597NoNoNoNo89
182x43 7x53 angiotensin_off10.98450NoNoNoYes89
196x44 6x45 angiotensin_off69.04010YesNoYesYes95
205x54 6x45 angiotensin_off66.26140YesNoYesYes85
215x54 5x58 angiotensin_off51.83620YesNoYesYes89
222x42 3x46 angiotensin_off58.08823.51677YesYesNoNo79
232x42 4x42 angiotensin_off37.5050YesYesNoNo77
242x41 4x42 angiotensin_off35.96731.1143YesYesNoNo67
252x41 I1x50 angiotensin_off31.31080YesYesYesNo67
261x58 I1x50 angiotensin_off20.09840NoNoYesNo47
271x58 1x59 angiotensin_off18.59332.57633NoNoNoNo44
281x55 1x59 angiotensin_off16.96522.57633NoNoNoNo34
291x55 1x56 angiotensin_off13.68720NoNoNoNo37
301x56 1x60 angiotensin_off12.03730NoNoYesYes74
313x50 6x37 angiotensin_off34.42240YesNoYesNo97
323x49 3x50 angiotensin_off11.19070NoNoYesNo89
332x42 4x46 angiotensin_off18.24960YesYesNoNo77
342x45 4x46 angiotensin_off16.61785.43189NoNoNoNo97
357x45 7x46 angiotensin_off28.84330NoNoYesNo99
367x45 7x49 angiotensin_off22.86260NoNoNoNo99
372x60 Lig angiotensin_off24.54145.12631YesYesYesYes70
382x60 E1x50 angiotensin_off13.77760YesYesYesYes79
39E1x50 E1x52 angiotensin_off10.38035.60048YesYesYesYes96
402x46 3x42 angiotensin_off30.85860NoYesNoNo97
413x42 4x49 angiotensin_off28.49237.06515NoNoNoNo77
423x41 4x49 angiotensin_off26.11890NoNoNoNo57
433x44 5x54 angiotensin_off13.11910NoNoYesNo78
443x44 5x50 angiotensin_off10.19943.1585NoNoYesYes78
453x50 6x30 angiotensin_off21.05720YesNoYesNo96
463x47 5x57 angiotensin_off11.38611.09586NoNoNoNo97
473x51 5x57 angiotensin_off10.41640YesYesNoNo87
483x54 6x30 angiotensin_off13.2060NoNoYesNo86
493x41 4x52 angiotensin_off14.60621.1143NoNoNoNo54
504x48 4x52 angiotensin_off12.18930NoNoNoNo34
516x40 7x49 angiotensin_off10.95920NoNoNoNo89
527x38 Lig angiotensin_off11.16546.60151NoNoYesYes60
532x53 7x42 angiotensin_off18.91530YesNoYesNo67
546x44 7x45 angiotensin_off45.320YesNoNoNo99
556x44 6x48 Shared74.119982.0553YesNoYesYes98
565x58 6x37 Shared10049.9144YesYesYesNo97
572x45 4x50 Shared14.978812.9633NoNoYesYes99
582x46 2x50 Shared33.217653.5997NoYesYesYes99
592x50 7x49 Shared16.494853.4628YesYesNoNo99
603x34 4x50 Shared10.112515.3421YesYesYesYes59
617x35 Lig angiotensin_on010.7452NoNoYesYes50
62E2 Lig angiotensin_on011.5777YesYesYesYes40
632x57 7x42 angiotensin_on011.3037YesYesYesNo87
643x36 7x42 angiotensin_on010.9929NoNoYesNo77
653x36 Lig angiotensin_on069.4002NoNoYesYes70
661x50 2x50 angiotensin_on9.76519100NoNoYesYes99
672x46 7x53 angiotensin_on054.5955NoYesNoYes99
683x50 7x53 angiotensin_on055.2093YesNoNoYes99
693x50 5x58 angiotensin_on055.5201YesNoYesYes99
703x47 5x58 angiotensin_on3.1151690.7958NoNoYesYes99
713x47 5x54 angiotensin_on9.2297190.2374NoNoYesNo98
725x54 6x44 angiotensin_on089.9739YesNoYesNo89
733x36 6x48 angiotensin_on1.3893476.3521NoNoYesYes78
747x49 7x53 angiotensin_on054.5771NoNoNoYes99
756x40 7x53 angiotensin_on055.9864NoNoNoYes89
765x58 6x40 angiotensin_on057.3773YesYesNoNo98
771x50 7x50 angiotensin_on4.8952680.9278NoNoNoNo99
781x53 7x55 angiotensin_on046.7269NoYesNoNo96
791x53 7x50 angiotensin_on073.6888NoYesNoNo99
801x53 1x57 angiotensin_on020.4605NoYesNoNo97
811x60 8x53 angiotensin_on4.4393821.9673YesYesNoYes45
828x50 8x53 angiotensin_on032.0487NoYesNoYes85
837x55 8x50 angiotensin_on039.5854NoNoNoYes68
841x57 2x44 angiotensin_on0.065125417.921NoNoYesNo75
852x40 I1x50 angiotensin_on5.0761610.2711YesNoYesNo87
862x44 I1x50 angiotensin_on3.2960712.8263YesNoYesNo57
873x34 4x53 angiotensin_on1.700519.3198YesYesNoNo58
883x41 4x53 angiotensin_on020.197NoNoNoNo58
893x37 3x41 angiotensin_on9.3020721.9515NoYesNoNo75
903x37 Lig angiotensin_on024.051NoYesYesYes70
912x42 4x45 angiotensin_on1.700512.0887YesYesNoNo75
923x51 5x61 angiotensin_on030.555YesYesNoNo88
935x61 5x65 angiotensin_on031.1925NoNoNoNo88
945x65 6x34 angiotensin_on032.8232NoNoNoYes86
955x62 6x34 angiotensin_on6.5378645.4783NoYesNoYes56
965x62 6x37 angiotensin_on049.2795NoYesYesNo57
973x52 I2x57 angiotensin_on024.0115NoNoNoYes56
982x38 I2x57 angiotensin_on014.4727NoNoNoYes76
994x41 4x45 angiotensin_on010.4923NoNoNoNo45
1005x51 6x44 angiotensin_on011.3406NoNoYesNo69
1011x46 1x50 angiotensin_on017.921NoYesNoNo89
1021x45 1x46 angiotensin_on010.2711NoNoNoYes58
1033x51 3x52 angiotensin_on5.4596825.031YesYesNoNo85

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
1x39Ligangiotensin_off9.99500010
2x60LigShared27.5416.211110
3x32LigShared15.233.931110
3x33LigShared13.425.280110
4x65Ligangiotensin_off24.4700010
E2x52LigShared5.886.191110
7x38LigShared9.156.410110
7x42Ligangiotensin_off3.7601010
NTNTShared18.76171111
E2NTShared9.1774.911111
E3NTangiotensin_off3.67501021
7x24NTShared7.287.280121
7x27NTangiotensin_off4.50501021
7x31NTShared6.316.310111
1x32NTangiotensin_off5.3401021
E1NTShared6.1757.21111
1x32E1Shared6.7054.131021
1x351x39Shared7.256.040021
1x352x64angiotensin_off8.3600022
1x392x57Shared7.6158.210012
1x397x39Shared5.3754.030012
2x532x57angiotensin_off6.701022
2x533x32angiotensin_off6.5501021
2x533x35Shared13.291.561022
2x537x42angiotensin_off14.4401021
2x602x63Shared4.823.861111
2x60E1x50angiotensin_off10.3101112
2x603x28Shared3.893.891112
2x603x29angiotensin_off4.9401112
2x63E1Shared6.4510.921111
2x63E1x50Shared8.210.611112
2x64E1Shared5.627.490021
7x35E1angiotensin_off3.47500111
E1x49E2Shared14.4155.010121
E1x50E2x50Shared11.115.671122
3x223x26Shared4.28.391122
3x22E2Shared14.7112.721121
3x26E2angiotensin_off6.29501021
3x294x65Shared13.83515.810021
3x327x42Shared5.053.791111
3x357x42angiotensin_off6.97501021
3x366x48Shared13.673.420112
3x373x41Shared3.616.190112
3x374x56Shared9.348.010112
3x375x43Shared3.5854.780111
4x64E2x52angiotensin_off14.7100021
E2E2Shared40.2965.491111
E2E2x52Shared12.8954.131111
6x62E2Shared9.58518.181121
6x487x42angiotensin_off7.23500021
6x516x55Shared5.4756.850112
6x517x37Shared8.8958.210112
6x517x38Shared9.283.980111
6x586x62angiotensin_off9.1400012
6x587x34angiotensin_off5.54500011
6x617x30Shared4.614.610112
1x392x61Shared3.3352.670012
6x617x27angiotensin_off3.2500112
7x28NTangiotensin_off3.22501421
5x405x43angiotensin_off2.61500021
5x35E2angiotensin_off2.16500021
5x36E2Shared2.08513.080121
4x61Ligangiotensin_off2.0200010
3x304x61angiotensin_off1.7900021
2x563x28angiotensin_off1.6800022
5x395x42angiotensin_off1.47500022
E2E2x51angiotensin_off0.8501111
LigNTangiotensin_on016.751101
1x357x35angiotensin_on05.080021
1x397x38angiotensin_on06.040011
2x562x60angiotensin_on04.850021
2x577x42angiotensin_on08.210021
2x63Ligangiotensin_on04.841110
E1Ligangiotensin_on010.641110
3x334x57angiotensin_on06.520112
3x334x61angiotensin_on03.420111
3x367x42angiotensin_on07.030111
3x36Ligangiotensin_on04.870110
3x375x42angiotensin_on04.990112
3x37Ligangiotensin_on04.130110
4x645x36angiotensin_on04.580022
4x65E2x52angiotensin_on017.10011
E2E2x50angiotensin_on05.121112
E2Ligangiotensin_on034.31110
E2x51Ligangiotensin_on04.950010
5x39E2x52angiotensin_on04.870021
5x436x51angiotensin_on07.860111
5x436x55angiotensin_on010.510112
5x43Ligangiotensin_on024.770110
6x517x34angiotensin_on03.940111
6x51Ligangiotensin_on07.920110
6x58Ligangiotensin_on014.050010
6x61E3angiotensin_on05.890112
6x61Ligangiotensin_on05.010110
7x247x27angiotensin_on03.610122
7x31Ligangiotensin_on022.070110
7x34Ligangiotensin_on013.980110
7x35Ligangiotensin_on07.630110
4x645x35angiotensin_on02.570022
3x304x57angiotensin_on01.710022
5x395x40angiotensin_on01.710022

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
angiotensin_off at1_off
angiotensin_on at1_on
Network Difference
Value angiotensin_off angiotensin_on
Imin 3.455 3.07
Number of Linked Nodes 253 253
Number of Specific Nodes 15 (5.93%) 15  (5.93%)
Number of Shared Nodes 238 (94.07%) 238  (94.07%)
Number of Links 284 294
Number of Specific Links 140 (49.30%) 150  (51.02%)
Number of Shared Links 144 (50.70%) 144  (48.98%)
Number of Hubs 40 40
Number of Specific Hubs 18 (45.00%) 18  (45.00%)
Number of Shared Hubs 22 (55.00%) 22  (55.00%)
Average % Shared Neighbours (Jaccard) 36.04
Average % Shared Neighbours (Otsuka) 45.41
Average % Shared Neighbours (Overlap Coefficient) 55.24
Average % Shared Cliques (k3-6) 76.11
Graphlets Similarity 0.54795
Paths Difference
Value angiotensin_off angiotensin_on
Number Of Nodes in MetaPath 59 49
Specific Nodes in MetaPath 35 (59.32%) 25  (51.02%)
Shared Nodes in MetaPath 238 (94.07%) 238  (94.07%)
Number Of Links MetaPath 60 49
Specific Links in MetaPath 54 (90.00%) 43  (87.76%)
Shared Links in MetaPath 144 (50.70%) 144  (50.70%)
Number of Shortest Paths 53737 68830
Length Of Smallest Path 3 3
Average Path Length 13.4631 15.3139
Length of Longest Path 29 33
Minimum Path Strength 0.7425 1.21
Average Path Strength 6.54261 5.63724
Maximum Path Strength 21.385 46.545
Minimum Path Correlation 0.705 0.7
Average Path Correlation 0.908626 0.93226
Maximum Path Correlation 0.985 1
Minimum % Of Corr. Nodes 3.7037 4.34783
Average % Of Corr. Nodes 39.8341 46.8589
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 53.7991 42.1279
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

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