Orange: nodes, hubs and links specific of ccka_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of ccka_on network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner ccka_off Avg Int. Strength ccka_on Avg Int. Strength ccka_off Num Of Links ccka_on Num Of Links ConSurf
11x31 ccka_off00421
21x43 ccka_off00425
31x46 ccka_off00428
41x50 ccka_off5050439
52x53 ccka_off500428
6E1x50 ccka_off10050538
73x50 ccka_off1000539
83x56 ccka_off00436
94x41 ccka_off00437
104x50 ccka_off1000439
11E2.K187 ccka_off00432
12E2x51 ccka_off5050434
136x45 ccka_off00436
14E3.E344 ccka_off00431
157x49 ccka_off5050439
162x42 Shared100100548
17E1x52 Shared100100756
183x31 Shared5050445
193x38 Shared1000548
203x51 Shared5050558
214x61 Shared100100567
22E2x52 Shared100100475
23E2.L200 Shared10050444
245x39 Shared10050548
255x47 Shared5050448
265x58 Shared100100459
276x44 Shared1000549
286x48 Shared100100658
296x52 Shared1000547
306x57 Shared10050455
317x42 Shared100100557
327x53 Shared50100469
33Lig Shared10010011170
341x39 ccka_on0100357
351x47 ccka_on00146
361x52 ccka_on00147
371x53 ccka_on00259
382x44 ccka_on00246
392x50 ccka_on050249
403x30 ccka_on500346
413x41 ccka_on00346
423x47 ccka_on00349
433x49 ccka_on050349
44I2x57 ccka_on050247
454x64 ccka_on00355
465x69 ccka_on00145
476x30 ccka_on00148
486x37 ccka_on00348
496x43 ccka_on00246
507x32 ccka_on00343
517x38 ccka_on00146
527x52 ccka_on00149
537x55 ccka_on00246
548x50 ccka_on050040
558x52 ccka_on050040
   
Orange: nodes, hubs and links specific of ccka_off network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of ccka_on network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner ccka_off Recurrence ccka_on Recurrence ccka_off Hub1? ccka_on Hub1? ccka_off Hub2? ccka_on Hub2? ConSurf1 ConSurf2
11x30 1x31 ccka_off19.06844.20688NoNoYesNo11
21x30 1x34 ccka_off21.40292.85635NoNoNoNo15
31x34 1x38 ccka_off23.72630NoNoNoNo55
41x38 7x39 ccka_off28.33990NoNoNoNo57
51x39 7x39 ccka_off35.17736.08708NoYesNoNo77
61x39 2x61 ccka_off19.06841.52246NoYesNoNo76
72x61 2x65 ccka_off16.72290.00277316NoNoNoNo65
81x43 2x54 ccka_off41.91510YesNoNoNo57
91x46 2x54 ccka_off39.68036.94121YesNoNoNo87
101x46 7x47 ccka_off11.99875.21353YesNoNoNo87
111x46 1x50 ccka_off21.34760YesNoYesNo89
122x53 7x42 ccka_off55.58440YesNoYesYes87
132x53 3x35 ccka_off49.77042.1076YesNoNoNo86
142x49 3x35 ccka_off49.43850NoNoNoNo86
152x49 3x39 ccka_off28.74371.3117NoNoNoNo89
162x46 3x39 ccka_off65.98990NoNoNoNo99
172x46 7x49 ccka_off64.33040NoNoYesNo99
187x49 7x53 ccka_off41.09090YesNoYesYes99
191x53 7x53 ccka_off21.57440NoYesYesYes99
202x53 6x48 ccka_off35.11090YesNoYesYes88
213x39 6x44 ccka_off52.86280NoNoYesYes99
221x53 2x47 ccka_off19.6881.91625NoYesNoNo99
231x54 2x47 ccka_off17.76840NoNoNoNo79
241x54 2x44 ccka_off13.89613.82973NoNoNoYes76
252x49 3x38 ccka_off54.70492.62063NoNoYesYes88
263x38 3x42 ccka_off23.38334.37881YesYesNoNo88
272x45 3x42 ccka_off22.91316.90793NoNoNoNo98
282x41 4x46 ccka_off14.15060NoNoNoNo57
293x38 4x50 ccka_off29.05356.36439YesYesYesNo89
303x43 6x44 ccka_off59.88830NoNoYesYes89
313x43 6x41 ccka_off58.90910NoNoNoNo88
325x54 6x41 ccka_off58.00190NoNoNoNo88
335x58 6x34 ccka_off56.6410YesYesNoNo98
343x50 6x34 ccka_off23.54930YesNoNoNo98
352x42 4x45 ccka_off22.74160YesYesNoNo86
362x52 4x50 ccka_off10.99190NoNoYesNo79
373x32 7x42 ccka_off24.96540NoNoYesYes77
386x58 Lig ccka_off57.80831.34498NoNoYesYes40
396x58 E2x51 ccka_off49.1730NoNoYesNo44
40E2.M195 E2x51 ccka_off46.52877.39878NoNoYesNo44
41E2.F185 E2.M195 ccka_off43.32585.92901NoNoNoNo44
42E2.A193 E2.F185 ccka_off41.58880NoNoNoNo34
43E1x49 E2.A193 ccka_off33.29650NoNoNoNo43
443x32 Lig ccka_off46.24662.69828NoNoYesYes70
454x60 5x39 ccka_off11.99872.97282NoNoYesYes88
464x59 4x60 ccka_off10.61021.48918NoNoNoNo48
473x40 3x41 ccka_off10.56040NoNoNoYes86
483x50 3x54 ccka_off13.90720YesNoNoNo99
495x61 6x34 ccka_off32.92580NoNoNoNo98
503x54 5x61 ccka_off14.23361.22573NoNoNoNo99
513x54 5x65 ccka_off24.24070NoNoNoNo99
524x41 4x45 ccka_off19.93690.978924YesNoNoNo76
534x61 E2x52 ccka_off33.69482.86467YesYesYesYes75
54E2.L200 E2.P201 ccka_off13.4371.6223YesYesNoNo45
555x36 E2.L200 ccka_off26.71350NoNoYesYes54
565x35 E2.P201 ccka_off10.81480NoNoNoNo45
575x36 5x40 ccka_off24.09141.48918NoNoNoNo56
585x40 6x59 ccka_off18.8141.48918NoNoNoNo66
595x37 6x59 ccka_off16.15870NoNoNoNo46
605x37 6x60 ccka_off13.49233.24182NoNoNoNo45
615x43 6x52 ccka_off18.18890NoNoYesYes77
625x65 6x31 ccka_off18.61480NoNoNoNo96
636x28 6x31 ccka_off15.53910NoNoNoNo56
646x40 7x49 ccka_off16.79480NoNoYesNo99
656x36 6x40 ccka_off13.09950NoNoNoNo99
666x36 7x53 ccka_off13.60850NoNoYesYes99
676x36 7x56 ccka_off22.70842.44038NoNoNoNo97
685x41 6x60 ccka_off10.81481.6223NoNoNoNo65
696x32 7x56 ccka_off11.35140NoNoNoNo87
702x53 3x32 ccka_off22.14420YesNoNoNo87
715x39 5x43 ccka_off16.16421.48918YesYesNoNo87
725x39 E2x52 ccka_off15.90978.7188YesYesYesYes85
733x46 6x37 ccka_off11.59480NoNoNoYes98
741x39 2x57 Shared55.092117.6234NoYesNoNo77
751x43 2x57 Shared48.553417.4653YesNoNoNo57
762x57 7x42 Shared10024.7033NoNoYesYes77
776x44 6x48 Shared89.743952.2962YesYesYesYes98
781x57 2x44 Shared11.943411.4282NoNoNoYes76
792x45 4x46 Shared49.128715.8819NoNoNoNo97
802x45 4x50 Shared28.489214.5646NoNoYesNo99
813x47 5x54 Shared60.18799.8392NoYesNoNo98
823x47 5x58 Shared58.549598.7299NoYesYesYes99
832x42 4x46 Shared36.499415.9096YesYesNoNo87
842x42 3x46 Shared12.695719.0599YesYesNoNo89
852x60 7x42 Shared27.084110.1913NoNoYesYes77
862x60 Lig Shared26.619510.7238NoNoYesYes70
87E1x49 E1x51 Shared31.520711.6334NoNoNoNo44
88E1x51 E1x52 Shared27.92513.081NoNoYesYes46
89E1x50 E1x52 Shared13.44829.8946YesNoYesYes86
904x61 Lig Shared48.415119.9251YesYesYesYes70
916x48 6x52 Shared57.011745.147YesYesYesYes87
926x52 Lig Shared49.17389.4537YesYesYesYes70
935x47 6x52 Shared10.195347.5014YesYesYesYes87
945x58 6x37 Shared13.88544.8613YesYesNoYes98
953x51 5x61 Shared19.444613.447YesYesNoNo89
96E2.L200 E2x52 Shared47.292114.5563YesYesYesYes45
97E3.L347 Lig Shared15.218224.096NoNoYesYes50
986x57 E3.L347 Shared13.508921.4254YesYesNoNo55
997x32 E3.R346 ccka_on011.4088NoYesNoNo34
1006x57 E3.R346 ccka_on1.9582912.8564YesYesNoNo54
1017x38 Lig ccka_on012.0771NoYesYesYes60
1027x38 7x42 ccka_on011.2562NoYesYesYes67
1031x43 1x47 ccka_on2.4174416.9523YesNoNoYes56
1041x47 2x51 ccka_on017.6705NoYesNoNo67
1051x50 2x51 ccka_on7.2301818.203YesNoNoNo97
1061x50 2x50 ccka_on2.4506318.7854YesNoNoYes99
1075x54 6x44 ccka_on0100NoNoYesYes89
1083x50 5x58 ccka_on047.3294YesNoYesYes99
1093x50 7x53 ccka_on038.9434YesNoYesYes99
1102x43 7x53 ccka_on5.9965783.0283NoNoYesYes89
1112x43 7x54 ccka_on077.9368NoNoNoNo88
1121x53 7x54 ccka_on051.1675NoYesNoNo98
1135x47 6x44 ccka_on047.3655YesYesYesYes89
1145x58 6x40 ccka_on047.3073YesYesNoNo99
1156x40 7x53 ccka_on039.0488NoNoYesYes99
1161x53 7x55 ccka_on015.061NoYesNoYes96
1177x54 8x50 ccka_on025.0582NoNoNoYes80
1187x55 8x50 ccka_on014.2263NoYesNoYes60
1191x53 1x57 ccka_on033.6911NoYesNoNo97
1201x57 2x40 ccka_on020.8014NoNoNoNo79
1212x40 I1x50 ccka_on015.1941NoNoNoNo98
1221x60 I1x50 ccka_on6.018713.3139NoNoNoNo68
1234x57 4x61 ccka_on5.9025319.0044NoNoYesYes87
1243x34 4x57 ccka_on017.5735NoNoNoNo68
1253x34 4x54 ccka_on2.1131815.1026NoNoNoNo64
1264x50 4x54 ccka_on017.9035YesNoNoNo94
1272x42 3x49 ccka_on013.0172YesYesNoYes89
1283x43 7x53 ccka_on021.6057NoNoYesYes89
129E2x50 Lig ccka_on036.4504NoNoYesYes90
130E1x50 E2x50 ccka_on1.9416933.8658YesNoNoNo89
1315x61 6x37 ccka_on015.9207NoNoNoYes98
132E2x52 Lig ccka_on029.3289YesYesYesYes50
133E2x51 Lig ccka_on010.1858YesNoYesYes40
1345x35 E2.L200 ccka_on012.8425NoNoYesYes44
1356x33 6x37 ccka_on1.543425.3106NoNoNoYes98
1365x65 6x33 ccka_on024.1986NoNoNoNo99
1375x65 6x30 ccka_on2.8046723.2085NoNoNoYes98
1385x72 6x30 ccka_on010.1997NoNoNoYes08
1391x52 7x55 ccka_on022.1242NoYesNoYes76
1402x46 3x43 ccka_on010.0721NoNoNoNo98
1413x43 7x49 ccka_on010.0804NoNoYesNo89
1423x46 7x53 ccka_on011.8996NoNoYesYes99

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
2x533x32ccka_off4.2401021
2x536x48ccka_off3.9901022
2x537x42ccka_off5.27501022
2x567x42Shared4.037.3950022
2x607x38ccka_off8.23500111
2x607x42Shared11.055.2350112
2x60LigShared5.0355.760110
2x647x35ccka_off3.72500012
3x25E1x50ccka_off4.1902022
E1x50E2x50Shared10.4756.9852021
3x25E2x50Shared7.287.282021
3x294x61Shared6.8656.2451111
3x294x65ccka_off7.19501112
3x29Ligccka_off4.55501110
3x327x42ccka_off7.18501112
3x32LigShared13.6755.031110
3x366x48Shared7.976.131022
3x366x52ccka_off7.2101021
4x574x61Shared4.196.5850021
4x61E2x52Shared20.1154.1251111
4x615x39ccka_off12.0601112
4x61LigShared6.21512.6651110
4x64E2.L200Shared6.454.1051122
4x65E2x52Shared4.621.980021
E2.L199E2x51Shared4.251.820021
6x58E2x51ccka_off19.19501111
E2x51E3.E344ccka_off4.6501111
E2.L200E2x52Shared6.77.311121
5x39E2x52Shared7.025.5151021
5x395x43Shared14.23514.8051022
5x436x52ccka_off4.8700021
5x476x52Shared11.7855.8950021
6x486x52Shared4.516.0151021
6x487x41Shared7.4155.561022
6x517x37Shared3.684.420012
6x517x41ccka_off6.1900012
6x51Ligccka_off6.85500010
6x52LigShared5.454.291110
6x55LigShared16.3558.0250110
6x57E3.L347Shared5.695.6950121
6x58E3.E344Shared5.23511.631111
6x58LigShared35.9323.691110
E3.E344E3.T340Shared7.0555.641112
E3.L347LigShared4.737.970110
7x347x37Shared4.424.420112
7x34LigShared19.3322.990110
3x334x57ccka_off3.4900022
E2.M195E2x51Shared3.110.5450021
6x54Ligccka_off1.9400010
5x445x47ccka_off1.8300022
E3.E344E3.S348ccka_off1.43501111
2x532x56ccka_on03.9651022
2x563x32ccka_on05.670021
2x603x32ccka_on04.910111
3x334x61ccka_on03.620021
4x64E2x52ccka_on018.5651121
E2x51Ligccka_on014.691110
E2x52Ligccka_on06.571110
5x446x52ccka_on03.650021
6x516x55ccka_on04.2450011
6x517x38ccka_on04.9950011
E3.E344Ligccka_on08.431110
E3.S348Ligccka_on05.5450110
7x347x38ccka_on03.5650111
7x387x42ccka_on05.2750112
7x417x42ccka_on05.0850022
3x294x64ccka_on012.4851112
4x614x64ccka_on012.9051112
7x38Ligccka_on06.590110
5x40E2x52ccka_on03.3950021
E2x50Ligccka_on03.242110
6x54E3.L347ccka_on02.3650011
2x64Ligccka_on02.2050010
7x31E3.S348ccka_on01.860021

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
ccka_off 7F8Y-CCKA-Devazepide
7F8U-CCKA-Lintitript
ccka_on 7EZH-CCKA-Cholecystokinin-8-Gi1/&β;1/&γ;2
7XOV-CCKA-SR146131-Gs/&β;1/&γ;2
Network Difference
Value ccka_off ccka_on
Imin 3.58 3.52
Number of Linked Nodes 269 286
Number of Specific Nodes 7 (2.60%) 24  (8.39%)
Number of Shared Nodes 262 (97.40%) 262  (91.61%)
Number of Links 293 318
Number of Specific Links 135 (46.08%) 160  (50.31%)
Number of Shared Links 158 (53.92%) 158  (49.69%)
Number of Hubs 33 40
Number of Specific Hubs 15 (45.45%) 22  (55.00%)
Number of Shared Hubs 18 (54.55%) 18  (45.00%)
Average % Shared Neighbours (Jaccard) 37.78
Average % Shared Neighbours (Otsuka) 47.21
Average % Shared Neighbours (Overlap Coefficient) 56.29
Average % Shared Cliques (k3-6) 75.00
Graphlets Similarity 0.491999
Paths Difference
Value ccka_off ccka_on
Number Of Nodes in MetaPath 91 65
Specific Nodes in MetaPath 48 (52.75%) 22  (33.85%)
Shared Nodes in MetaPath 262 (97.40%) 262  (97.40%)
Number Of Links MetaPath 98 69
Specific Links in MetaPath 73 (74.49%) 44  (63.77%)
Shared Links in MetaPath 158 (53.92%) 158  (53.92%)
Number of Shortest Paths 53002 77199
Length Of Smallest Path 3 3
Average Path Length 13.699 13.5018
Length of Longest Path 29 27
Minimum Path Strength 0.7625 0.915
Average Path Strength 6.98741 5.82478
Maximum Path Strength 26.1425 17.0333
Minimum Path Correlation 0.7 0.7
Average Path Correlation 0.925084 0.923632
Maximum Path Correlation 0.99 0.99
Minimum % Of Corr. Nodes 4.54545 4.7619
Average % Of Corr. Nodes 49.5841 46.4805
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 36.4351 45.7558
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

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