Orange: nodes, hubs and links specific of lpa1_on_gp network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of lpa1_off network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner lpa1_on_gp Avg Int. Strength lpa1_off Avg Int. Strength lpa1_on_gp Num Of Links lpa1_off Num Of Links ConSurf
1NT.N46 lpa1_on_gp00532
21x40 lpa1_on_gp00424
32x50 lpa1_on_gp1000539
42x51 lpa1_on_gp00437
52x52 lpa1_on_gp00437
62x57 lpa1_on_gp1000637
73x28 lpa1_on_gp10066.6667736
83x29 lpa1_on_gp500434
93x34 lpa1_on_gp00426
103x40 lpa1_on_gp500428
113x42 lpa1_on_gp500438
123x43 lpa1_on_gp500438
133x49 lpa1_on_gp00438
143x55 lpa1_on_gp500436
153x56 lpa1_on_gp500515
164x42 lpa1_on_gp500417
17E2.I189 lpa1_on_gp500423
185x62 lpa1_on_gp500416
196x58 lpa1_on_gp1000434
207x30 lpa1_on_gp00404
217x53 lpa1_on_gp1000629
228x50 lpa1_on_gp00438
23b.1x11 lpa1_on_gp00408
24b.1x12 lpa1_on_gp00406
25b.1x16 lpa1_on_gp00404
26b.lh12x2 lpa1_on_gp500408
27b.lhb1x6 lpa1_on_gp00503
28b.b1x6 lpa1_on_gp1000409
29b.l1x3 lpa1_on_gp1000609
30b.b2x1 lpa1_on_gp1000508
31b.b2x5 lpa1_on_gp1000407
32b.b3x3 lpa1_on_gp500408
33b.l3x2 lpa1_on_gp500509
34b.b4x2 lpa1_on_gp500408
35b.b4x4 lpa1_on_gp00408
36b.b4x6 lpa1_on_gp1000709
37b.b5x3 lpa1_on_gp1000609
38b.b5x7 lpa1_on_gp500407
39b.l5x1 lpa1_on_gp500508
40b.l5x5 lpa1_on_gp1000609
41b.b6x5 lpa1_on_gp1000406
42b.l6x5 lpa1_on_gp500404
43b.b7x1 lpa1_on_gp1000604
44b.b8x1 lpa1_on_gp1000408
45b.b8x3 lpa1_on_gp00406
46b.b8x4 lpa1_on_gp1000706
47b.l8x5 lpa1_on_gp00403
48b.l8x8 lpa1_on_gp500504
49b.l9x3 lpa1_on_gp1000609
50b.l9x6 lpa1_on_gp1000808
51b.b10x5 lpa1_on_gp1000509
52b.l10x1 lpa1_on_gp500403
53b.b11x4 lpa1_on_gp1000409
54b.l11x2 lpa1_on_gp1000409
55b.b12x6 lpa1_on_gp1000608
56b.l12x1 lpa1_on_gp00406
57b.b13x7 lpa1_on_gp1000507
58b.l13x3 lpa1_on_gp1000609
59b.l13x6 lpa1_on_gp1000409
60b.b14x3 lpa1_on_gp500405
61b.b15x1 lpa1_on_gp500409
62b.b15x2 lpa1_on_gp500406
63b.l15x2 lpa1_on_gp1000509
64b.b16x4 lpa1_on_gp1000406
65b.b16x5 lpa1_on_gp1000405
66b.b16x6 lpa1_on_gp1000608
67b.b17x4 lpa1_on_gp00405
68b.b17x7 lpa1_on_gp500408
69b.l17x3 lpa1_on_gp1000509
70b.l17x6 lpa1_on_gp500409
71b.l17x7 lpa1_on_gp500407
72b.b18x3 lpa1_on_gp1000408
73b.l18x1 lpa1_on_gp1000706
74b.b19x2 lpa1_on_gp500606
75b.b19x4 lpa1_on_gp1000408
76b.l19x1 lpa1_on_gp500409
77b.l19x2 lpa1_on_gp500409
78b.b20x2 lpa1_on_gp500406
79b.b20x4 lpa1_on_gp1000508
80b.b20x6 lpa1_on_gp1000506
81b.b20x7 lpa1_on_gp500409
82b.l20x2 lpa1_on_gp00409
83b.b21x1 lpa1_on_gp1000407
84b.b21x7 lpa1_on_gp1000605
85b.l21x5 lpa1_on_gp00504
86b.b22x5 lpa1_on_gp500407
87b.b23x2 lpa1_on_gp500406
88b.b23x6 lpa1_on_gp1000607
89b.b24x2 lpa1_on_gp00405
90b.b24x4 lpa1_on_gp1000506
91b.l24x3 lpa1_on_gp00405
92b.b25x3 lpa1_on_gp500405
93b.l25x3 lpa1_on_gp1000509
94b.b26x3 lpa1_on_gp1000406
95b.l27x1 lpa1_on_gp1000709
96b.l27x2 lpa1_on_gp500409
97b.b28x3 lpa1_on_gp1000407
98b.b28x4 lpa1_on_gp500406
99b.b28x6 lpa1_on_gp1000509
100G.S1.02 lpa1_on_gp1000605
101G.H1.01 lpa1_on_gp00409
102G.H1.04 lpa1_on_gp1000507
103G.H1.07 lpa1_on_gp500509
104G.H1.08 lpa1_on_gp500408
105G.S2.08 lpa1_on_gp1000405
106G.S3.03 lpa1_on_gp1000407
107G.S3.06 lpa1_on_gp500506
108G.s3h2.03 lpa1_on_gp1000509
109G.H2.04 lpa1_on_gp500409
110G.H2.06 lpa1_on_gp1000609
111G.H2.07 lpa1_on_gp1000509
112G.H2.09 lpa1_on_gp1000408
113G.h2s4.01 lpa1_on_gp500509
114G.S4.04 lpa1_on_gp500409
115G.s4h3.04 lpa1_on_gp1000508
116G.s4h3.08 lpa1_on_gp00408
117G.H3.01 lpa1_on_gp1000409
118G.H3.09 lpa1_on_gp1000609
119G.H3.13 lpa1_on_gp500405
120G.H3.14 lpa1_on_gp500408
121G.H3.17 lpa1_on_gp1000604
122G.H3.18 lpa1_on_gp500409
123G.S5.03 lpa1_on_gp500408
124G.S5.05 lpa1_on_gp1000709
125G.S5.07 lpa1_on_gp1000509
126G.HG.04 lpa1_on_gp1000508
127G.HG.07 lpa1_on_gp1000409
128G.HG.14 lpa1_on_gp00405
129G.hgh4.02 lpa1_on_gp1000807
130G.hgh4.05 lpa1_on_gp500406
131G.H4.03 lpa1_on_gp1000604
132G.h4s6.02 lpa1_on_gp500407
133G.S6.02 lpa1_on_gp1000607
134G.S6.03 lpa1_on_gp1000405
135G.S6.04 lpa1_on_gp500409
136G.s6h5.01 lpa1_on_gp1000409
137G.H5.03 lpa1_on_gp500408
138G.H5.08 lpa1_on_gp1000508
139G.H5.25 lpa1_on_gp1000407
140g.h2x11 lpa1_on_gp500406
141g.ctx3 lpa1_on_gp1000509
142g.ctx6 lpa1_on_gp500406
143g.ctx16 lpa1_on_gp1000708
144NT.Y34 Shared100100866
1451x50 Shared100100449
146I1x50 Shared100100568
1472x46 Shared1000449
1483x25 Shared100100669
1493x33 Shared1000445
1503x50 Shared100100559
1513x51 Shared5033.3333447
152E2.Y202 Shared100100774
1535x39 Shared100100457
1545x43 Shared100100456
1555x47 Shared100100447
1565x58 Shared033.3333449
1576x44 Shared50100449
1586x48 Shared100100758
1597x37 Shared50100445
1608x54 Shared066.6667446
161Lig Shared10010013140
162NT.F32 lpa1_off00352
163NT.K39 lpa1_off033.3333348
164NT.W45 lpa1_off00351
1651x36 lpa1_off00144
1662x38 lpa1_off033.3333346
1672x45 lpa1_off50100349
1683x32 lpa1_off00146
1694x49 lpa1_off00357
170E2.W186 lpa1_off033.3333346
171E2.M198 lpa1_off50100343
1726x45 lpa1_off00346
1737x42 lpa1_off033.3333257
1747x56 lpa1_off5033.3333347
   
Orange: nodes, hubs and links specific of lpa1_on_gp network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of lpa1_off network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner lpa1_on_gp Recurrence lpa1_off Recurrence lpa1_on_gp Hub1? lpa1_off Hub1? lpa1_on_gp Hub2? lpa1_off Hub2? ConSurf1 ConSurf2
15x43 6x48 lpa1_on_gp39.2190YesYesYesYes68
23x40 6x48 lpa1_on_gp42.49880YesNoYesYes88
33x40 5x50 lpa1_on_gp46.68192.97766YesNoNoNo87
43x44 5x50 lpa1_on_gp45.25150NoNoNoNo77
53x44 5x53 lpa1_on_gp45.54190NoNoNoNo75
65x53 5x57 lpa1_on_gp45.69660NoNoNoNo56
73x51 3x55 lpa1_on_gp45.99312.52445YesYesYesNo76
83x55 5x64 lpa1_on_gp63.58061.26421YesNoNoNo66
95x64 5x68 lpa1_on_gp63.86260NoNoNoNo67
105x68 G.H5.12 lpa1_on_gp64.16110NoNoNoNo76
11G.H5.08 G.H5.12 lpa1_on_gp64.3170YesNoNoNo86
12G.H5.08 G.S2.08 lpa1_on_gp61.59880YesNoYesNo85
13G.H5.04 G.S2.08 lpa1_on_gp62.38330NoNoYesNo75
14G.H1.08 G.H5.04 lpa1_on_gp62.52330YesNoNoNo87
15G.H1.04 G.H1.08 lpa1_on_gp76.86430YesNoYesNo78
16G.H1.04 G.S5.07 lpa1_on_gp82.84060YesNoYesNo79
17G.S5.07 G.s5hg.01 lpa1_on_gp92.88430YesNoNoNo99
18G.s4h3.02 G.s5hg.01 lpa1_on_gp91.39620NoNoNoNo99
19G.HG.07 G.s4h3.02 lpa1_on_gp91.55610YesNoNoNo99
20G.HG.07 G.s4h3.04 lpa1_on_gp91.66750YesNoYesNo98
21G.HG.04 G.s4h3.04 lpa1_on_gp95.01950YesNoYesNo88
22G.HG.04 G.s4h3.01 lpa1_on_gp95.34180YesNoNoNo86
23G.S5.06 G.s4h3.01 lpa1_on_gp92.28910NoNoNoNo86
24G.S5.06 G.S6.03 lpa1_on_gp93.52050NoNoYesNo85
25G.S5.04 G.S6.03 lpa1_on_gp93.6920NoNoYesNo95
26G.S4.04 G.S5.04 lpa1_on_gp91.69260YesNoNoNo99
27G.H3.08 G.S4.04 lpa1_on_gp99.9720NoNoYesNo89
28G.H2.04 G.H3.08 lpa1_on_gp99.66070YesNoNoNo98
29G.H2.04 G.H2.07 lpa1_on_gp1000YesNoYesNo99
30G.H2.07 G.h2s4.01 lpa1_on_gp57.10090YesNoYesNo99
31G.h2s4.01 b.l5x5 lpa1_on_gp55.21840YesNoYesNo99
32b.l3x1 b.l5x5 lpa1_on_gp67.19430NoNoYesNo99
33b.b2x1 b.l3x1 lpa1_on_gp67.10370YesNoNoNo89
34b.b2x1 b.l27x1 lpa1_on_gp65.07770YesNoYesNo89
35b.b26x1 b.l27x1 lpa1_on_gp74.27270NoNoYesNo99
36b.b26x1 b.b26x2 lpa1_on_gp74.12050NoNoNoNo97
37b.b26x2 b.b2x3 lpa1_on_gp73.8150NoNoNoNo76
38b.b26x4 b.b2x3 lpa1_on_gp73.66160NoNoNoNo56
39b.b26x3 b.b26x4 lpa1_on_gp73.50790YesNoNoNo65
403x49 4x41 lpa1_on_gp11.6770YesNoNoNo86
413x50 G.H5.25 lpa1_on_gp12.02380YesYesYesNo97
423x56 I2x56 lpa1_on_gp11.96860YesNoNoNo56
434x41 I2x56 lpa1_on_gp11.8622.21834NoNoNoNo66
443x54 3x55 lpa1_on_gp17.6080NoNoYesNo86
453x54 G.H5.20 lpa1_on_gp17.35560NoNoNoNo88
46G.H5.20 G.H5.25 lpa1_on_gp14.28970NoNoYesNo87
473x56 G.H5.19 lpa1_on_gp12.29530YesNoNoNo58
48G.H2.07 b.l9x6 lpa1_on_gp66.40540YesNoYesNo98
49G.H2.06 b.l9x6 lpa1_on_gp45.57590YesNoYesNo98
50G.H2.06 b.l17x6 lpa1_on_gp22.88790YesNoYesNo99
51b.l17x6 b.l19x1 lpa1_on_gp23.11960YesNoYesNo99
52b.l17x5 b.l19x1 lpa1_on_gp52.73370NoNoYesNo69
53b.l17x5 b.l19x2 lpa1_on_gp52.3780NoNoYesNo69
54b.b20x2 b.l19x2 lpa1_on_gp33.67690YesNoYesNo69
55b.b20x2 b.b20x4 lpa1_on_gp32.18160YesNoYesNo68
56b.b20x4 b.b20x6 lpa1_on_gp31.4780YesNoYesNo86
57b.b17x7 b.b20x6 lpa1_on_gp19.68080YesNoYesNo86
58b.b17x7 b.b21x1 lpa1_on_gp18.82850YesNoYesNo87
59b.1x19 b.b21x1 lpa1_on_gp17.30990NoNoYesNo67
60b.1x15 b.1x19 lpa1_on_gp12.66110NoNoNoNo76
61b.1x12 b.1x15 lpa1_on_gp11.88090YesNoNoNo67
62G.H2.06 b.b18x1 lpa1_on_gp22.76280YesNoNoNo99
63b.b18x1 b.l19x1 lpa1_on_gp22.70410NoNoYesNo99
64b.b22x4 b.b26x3 lpa1_on_gp68.72670NoNoYesNo56
65b.b22x4 b.b26x5 lpa1_on_gp68.5610NoNoNoNo57
66b.b26x5 b.b27x1 lpa1_on_gp68.39490NoNoNoNo76
67b.b27x1 g.ctx5 lpa1_on_gp67.38570NoNoNoNo69
68g.ctx3 g.ctx5 lpa1_on_gp66.76650YesNoNoNo99
69g.ctx3 g.ctx6 lpa1_on_gp44.34380YesNoYesNo96
70b.lhb1x6 g.ctx6 lpa1_on_gp22.22420YesNoYesNo36
71b.b24x7 b.lhb1x6 lpa1_on_gp21.2910NoNoYesNo93
72b.b24x7 b.l24x3 lpa1_on_gp42.04730NoNoYesNo95
73b.l24x3 b.lhb1x3 lpa1_on_gp40.10680YesNoNoNo52
74b.lhb1x3 g.h2x9 lpa1_on_gp39.11920NoNoNoNo24
75b.l24x2 g.h2x9 lpa1_on_gp38.64740NoNoNoNo64
76b.h2x5 b.l24x2 lpa1_on_gp37.67250NoNoNoNo56
77b.h2x1 b.h2x5 lpa1_on_gp37.18450NoNoNoNo55
78b.l22x5 g.ctx6 lpa1_on_gp21.4750NoNoYesNo96
79b.b24x7 b.l22x5 lpa1_on_gp21.24180NoNoNoNo99
80b.b21x5 b.h2x1 lpa1_on_gp35.71820NoNoNoNo45
81g.ctx3 g.ctx4 lpa1_on_gp30.04820YesNoNoNo97
82b.l26x5 g.ctx4 lpa1_on_gp28.84790NoNoNoNo57
83b.l26x3 b.l26x5 lpa1_on_gp28.60670NoNoNoNo75
84b.l26x1 b.l26x3 lpa1_on_gp28.10250NoNoNoNo77
85b.b2x5 b.l26x1 lpa1_on_gp27.88080YesNoNoNo77
86b.b2x5 b.b3x2 lpa1_on_gp20.82870YesNoNoNo75
87b.b3x2 b.b4x6 lpa1_on_gp20.57630NoNoYesNo59
88b.b4x6 b.l1x3 lpa1_on_gp15.47170YesNoYesNo99
89b.l1x3 b.l3x2 lpa1_on_gp14.89160YesNoYesNo99
90b.b4x2 b.l3x2 lpa1_on_gp13.56950YesNoYesNo89
91b.b4x2 b.b5x8 lpa1_on_gp12.76540YesNoNoNo85
92b.b5x7 b.b5x8 lpa1_on_gp12.49650YesNoNoNo75
93b.l11x1 b.l9x6 lpa1_on_gp49.07780NoNoYesNo98
94b.b11x6 b.l11x1 lpa1_on_gp48.89760NoNoNoNo99
95b.b11x6 b.l9x3 lpa1_on_gp46.64330NoNoYesNo99
96b.l9x3 b.l9x7 lpa1_on_gp17.6980YesNoNoNo97
97b.b8x1 b.l9x7 lpa1_on_gp17.38460YesNoNoNo87
98b.b10x3 b.b8x1 lpa1_on_gp34.48470NoNoYesNo88
99b.b10x3 b.b6x2 lpa1_on_gp33.83140NoNoNoNo88
100b.b10x2 b.b6x2 lpa1_on_gp33.17770NoNoNoNo68
101b.b11x4 b.l9x3 lpa1_on_gp17.69690YesNoYesNo99
102b.b11x4 b.b8x1 lpa1_on_gp17.43580YesNoYesNo98
103b.b12x6 b.l9x3 lpa1_on_gp10.1540YesNoYesNo89
104G.s3h2.03 b.l7x2 lpa1_on_gp11.94170YesNoNoNo99
105b.b10x2 b.b14x3 lpa1_on_gp26.56410NoNoYesNo65
106b.b14x3 b.b15x1 lpa1_on_gp16.61130YesNoYesNo59
107b.b15x1 b.b16x6 lpa1_on_gp11.3210YesNoYesNo98
108b.b19x6 b.l19x2 lpa1_on_gp17.9910NoNoYesNo99
109b.b18x3 b.b19x4 lpa1_on_gp15.34560YesNoYesNo88
110b.b15x2 b.b18x3 lpa1_on_gp13.81050YesNoYesNo68
111b.b19x2 b.b20x6 lpa1_on_gp11.53170YesNoYesNo66
112b.b15x2 b.b16x5 lpa1_on_gp10.47170YesNoYesNo65
113b.b21x5 b.b21x7 lpa1_on_gp35.22860NoNoYesNo45
114b.b20x5 b.b21x7 lpa1_on_gp13.23290NoNoYesNo75
115b.b22x5 b.l18x1 lpa1_on_gp10.20040YesNoYesNo76
116b.b21x7 b.b24x6 lpa1_on_gp11.26370YesNoNoNo58
117b.l19x1 b.l21x8 lpa1_on_gp12.32810YesNoNoNo94
118b.l21x8 b.l23x1 lpa1_on_gp12.06420NoNoNoNo46
119b.l25x6 b.l27x1 lpa1_on_gp10.67120NoNoYesNo89
120G.H5.11 G.S3.03 lpa1_on_gp12.16590NoNoYesNo87
121G.S2.06 G.S3.03 lpa1_on_gp14.01760NoNoYesNo87
122G.H5.11 G.H5.15 lpa1_on_gp12.62840NoNoNoNo88
123G.H5.15 G.H5.19 lpa1_on_gp12.41230NoNoNoNo88
124G.H1.08 G.S2.06 lpa1_on_gp14.25010YesNoNoNo88
125b.l23x1 b.l25x6 lpa1_on_gp11.29070NoNoNoNo68
126b.l5x5 b.l7x2 lpa1_on_gp11.72040YesNoNoNo99
127G.s3h2.03 b.l9x6 lpa1_on_gp11.74840YesNoYesNo98
1283x25 E2.L201 Shared12.859416.0054YesYesNoNo91
1295x43 Lig Shared38.033117.2378YesYesYesYes60
1303x51 5x57 Shared45.863112.2406YesYesNoNo76
1316x48 Lig lpa1_off097.4875YesYesYesYes80
132E1.T109 Lig lpa1_off1.8869719.4124NoNoYesYes50
1333x29 Lig lpa1_off7.4277530.8301YesNoYesYes40
1343x25 3x29 lpa1_off4.4243620.3109YesYesYesNo94
135E2.L201 NT.F33 lpa1_off6.8217413.7036NoNoNoNo16
136NT.F32 NT.F33 lpa1_off3.7907412.4712NoYesNoNo26
1373x26 E2.Y202 lpa1_off2.6165717.3094NoNoYesYes54
1383x26 E2.N187 lpa1_off013.2066NoNoNoNo56
1393x33 Lig lpa1_off6.5546611.6641YesYesYesYes50
1403x33 E2.Y202 lpa1_off2.7670111.4177YesYesYesYes54
141Lig NT.K39 lpa1_off0.25279310.8015YesYesNoYes08
142E1.T109 E1x47 lpa1_off1.6289618.4822NoNoNoNo55
143E1x48 NT.W45 lpa1_off1.0874517.0748NoNoNoYes41
144E1x47 E1x48 lpa1_off1.358419.476NoNoNoNo54
1452x57 3x32 lpa1_off012.6779YesNoNoYes76
1463x32 Lig lpa1_off022.247NoYesYesYes60
1471x50 2x50 lpa1_off4.1696417.7348YesYesYesNo99
1482x50 7x49 lpa1_off2.0586529.2558YesNoNoNo99
1492x46 7x49 lpa1_off087.8866YesYesNoNo99
1502x46 3x43 lpa1_off0.49612395.0823YesYesYesNo98
1513x43 6x44 lpa1_off0100YesNoYesYes89
1526x44 6x48 lpa1_off0.52451299.3798YesYesYesYes98
1532x50 7x46 lpa1_off0.27345710.4914YesNoNoNo99
1541x47 2x54 lpa1_off014.2443NoNoNoNo67
1551x46 2x54 lpa1_off0.27171916.6176NoNoNoNo87
1568x50 8x54 lpa1_off1.3690210.4914YesNoYesYes86
1578x50 I1x50 lpa1_off3.7528811.5687YesNoYesYes88
1582x40 I1x50 lpa1_off5.0755621.4956NoNoYesYes98
1592x40 6x33 lpa1_off038.634NoNoNoNo97
1602x43 6x33 lpa1_off064.8923NoNoNoNo87
1612x43 7x53 lpa1_off0.29624565.6834NoNoYesNo89
1626x40 7x53 lpa1_off0.43818766.3513NoNoYesNo89
1636x40 7x49 lpa1_off073.3681NoNoNoNo89
1642x38 4x39 lpa1_off024.0041NoYesNoNo63
1652x38 3x49 lpa1_off3.2563830.2656NoYesYesNo68
1662x39 3x49 lpa1_off5.756536.2447NoNoYesNo88
1672x39 2x40 lpa1_off5.520520.0803NoNoNoNo89
1682x39 3x50 lpa1_off019.2494NoNoYesYes89
1693x50 6x33 lpa1_off026.783YesYesNoNo97
1705x58 6x41 lpa1_off021.1775YesYesNoNo97
1713x43 6x41 lpa1_off027.8445YesNoNoNo87
1722x45 3x42 lpa1_off3.1509310.7856NoYesYesNo98
1732x46 3x42 lpa1_off4.7016819.2375YesYesYesNo98
1743x28 E1x52 lpa1_off1.0897716.4507YesNoNoNo66
1753x25 3x28 lpa1_off4.6433611.4654YesYesYesNo96
1763x47 5x58 lpa1_off0.31903314.618NoNoYesYes89
1773x47 5x57 lpa1_off013.4333NoNoNoNo86
1784x39 I2x55 lpa1_off015.3852NoNoNoNo33
1795x39 5x43 lpa1_off012.9085YesYesYesYes76
1806x55 Lig lpa1_off0.27307113.6082NoNoYesYes60
1815x51 6x45 lpa1_off2.4468213.5525NoNoNoYes56
1825x51 6x44 lpa1_off3.2411214.7372NoNoYesYes59
1836x40 7x52 lpa1_off011.0082NoNoNoNo88

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
E1.T109LigShared6.853336.290210
3x29LigShared13.2910.9051210
3x32Liglpa1_off4.8533300010
3x33LigShared6.213336.281210
E2.M198Liglpa1_off7.8833301010
5x43LigShared5.6110.541210
6x48Liglpa1_off6.5866700210
6x51Liglpa1_off6.4833300010
6x55LigShared11.61673.9250210
7x34LigShared12.663314.5351210
7x35LigShared5.096678.530210
7x38LigShared14.026712.7650010
NT.I30NT.Y34Shared8.863332.421021
3x25NT.I30lpa1_off6.2666701222
NT.K39NT.Y34Shared5.978.361211
NT.L41NT.Y34Shared8.986675.8650021
E1x50NT.Y34Shared4.994.370211
3x25NT.Y34Shared9.652.8951221
E2.P200NT.Y34Shared19.00677.650221
NT.H40NT.K39lpa1_off5.6766700021
7x34NT.K39Shared94.7251211
2x603x28Shared4.866.680021
2x603x32lpa1_off5.7100021
2x63E1x52lpa1_off12.3600022
3x28E1x52Shared4.864.860212
3x253x28Shared9.3333371221
3x253x29Shared10.586715.331221
3x25E2.Y202Shared5.466673.861222
3x29E2.Y202Shared9.026.7651212
3x33E2.Y202Shared6.133336.91212
3x335x43lpa1_off6.701211
3x365x47lpa1_off5.4900022
3x366x48Shared12.916.830021
3x374x56Shared9.036.0250222
3x375x43Shared6.066.060221
3x405x47Shared4.434.4350222
5x40E2.S196lpa1_off4.500212
6x54E2.M198Shared7.074.9450021
6x58E2.M198Shared7.393339.010021
7x34E2.M198Shared6.7666711.5051211
5x39E2.Y202Shared4.965.461222
5x395x43lpa1_off9.9666701221
5x406x55Shared4.154.8450211
5x435x47lpa1_off7.9101212
6x446x48Shared16.036716.540221
6x447x45lpa1_off7.6533300222
6x476x48lpa1_off3.9200021
6x477x45Shared5.773339.450022
6x487x41Shared10.373.240212
6x517x37Shared4.523.010012
6x547x37Shared9.748.5250022
LigNT.K39Shared4.5533310.031201
2x573x32lpa1_off3.6300021
2x563x32Shared2.163333.250021
1x35Liglpa1_off1.8233300010
E1.T109E1x47Shared1.823.640212
E1x47E1x50lpa1_off1.8200021
3x303x33Shared1.684.190021
7x357x36lpa1_off1.6533300212
5x446x55lpa1_off1.5800021
LigNT.Y34lpa1_on_gp03.3351201
1x357x35lpa1_on_gp08.350011
2x572x60lpa1_on_gp02.930022
2x577x38lpa1_on_gp09.9650021
2x633x28lpa1_on_gp04.820021
7x35E1.T109lpa1_on_gp04.5050211
3x28E1x50lpa1_on_gp04.5250211
E1x50Liglpa1_on_gp06.840210
3x25E2.P200lpa1_on_gp03.3751222
3x28Liglpa1_on_gp06.470210
3x335x39lpa1_on_gp06.91212
3x406x44lpa1_on_gp03.2750222
3x406x48lpa1_on_gp03.0650221
4x565x43lpa1_on_gp04.070221
6x58E2.S196lpa1_on_gp05.1550022
5x40Liglpa1_on_gp03.9350210
5x436x48lpa1_on_gp05.1551211
5x476x44lpa1_on_gp07.250222
5x476x48lpa1_on_gp07.910221
6x487x45lpa1_on_gp010.7350212
3x283x29lpa1_on_gp04.6750211
1x357x36lpa1_on_gp00.6550012
NT.N35NT.Y34lpa1_on_gp00.580021

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
lpa1_on_gp 7TD1-LPA1-LPA-Gi1/β1/γ2
7YU3-LPA1-ONO-0740556-Gi1/β1/γ2
lpa1_off 4Z36-LPA1-ONO-3080573
4Z35-LPA1-ONO-9910539
4Z34-LPA1-ONO-9780307
Network Difference
Value lpa1_on_gp lpa1_off
Imin 2.875 3.80333
Number of Linked Nodes 893 277
Number of Specific Nodes 628 (70.32%) 12  (4.33%)
Number of Shared Nodes 265 (29.68%) 265  (95.67%)
Number of Links 1080 299
Number of Specific Links 922 (85.37%) 141  (47.16%)
Number of Shared Links 158 (14.63%) 158  (52.84%)
Number of Hubs 161 31
Number of Specific Hubs 143 (88.82%) 13  (41.94%)
Number of Shared Hubs 18 (11.18%) 18  (58.06%)
Average % Shared Neighbours (Jaccard) 11.29
Average % Shared Neighbours (Otsuka) 14.62
Average % Shared Neighbours (Overlap Coefficient) 17.77
Average % Shared Cliques (k3-6) 50.81
Graphlets Similarity 0.525598
Paths Difference
Value lpa1_on_gp lpa1_off
Number Of Nodes in MetaPath 129 57
Specific Nodes in MetaPath 120 (93.02%) 48  (84.21%)
Shared Nodes in MetaPath 265 (29.68%) 265  (29.68%)
Number Of Links MetaPath 130 56
Specific Links in MetaPath 127 (97.69%) 53  (94.64%)
Shared Links in MetaPath 158 (14.63%) 158  (14.63%)
Number of Shortest Paths 989486 48586
Length Of Smallest Path 3 3
Average Path Length 34.6264 13.103
Length of Longest Path 76 28
Minimum Path Strength 0.655 0.973333
Average Path Strength 5.98566 6.76859
Maximum Path Strength 25.34 16.38
Minimum Path Correlation 0.7 0.7
Average Path Correlation 0.980236 0.91403
Maximum Path Correlation 1 0.99
Minimum % Of Corr. Nodes 1.92308 4.34783
Average % Of Corr. Nodes 46.1248 45.729
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 48.2567 35.3261
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download lpa1_off_on_gp.zip<



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