Orange: nodes, hubs and links specific of m4_on_gp network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of m4_off network

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Owner: the name of the network the hub belong to or "Shared" if the corresponding hub is present in both networks.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub in the corresponding network.

Num Of Links: the number of links of the corresponding hub in the corresponding network.

ConSurf: this column reports the ConSurf conservation grades of each hub.


Index Hub Owner m4_on_gp Avg Int. Strength m4_off Avg Int. Strength m4_on_gp Num Of Links m4_off Num Of Links ConSurf
1b.1x16 m4_on_gp2.511870404
2b.lhb1x3 m4_on_gp2.97650502
3b.l1x3 m4_on_gp8.526670609
4b.b2x1 m4_on_gp8.3580508
5b.b2x3 m4_on_gp3.87750506
6b.b2x5 m4_on_gp7.4560507
7b.b3x3 m4_on_gp4.0940508
8b.l3x2 m4_on_gp4.57050509
9b.b4x3 m4_on_gp4.82250407
10b.b4x6 m4_on_gp9.730830609
11b.b5x2 m4_on_gp5.820620407
12b.b5x3 m4_on_gp6.636670609
13b.b5x5 m4_on_gp5.440630405
14b.b5x7 m4_on_gp6.29750407
15b.l5x1 m4_on_gp4.64150508
16b.l5x5 m4_on_gp7.020360709
17b.b6x5 m4_on_gp4.202080606
18b.l6x5 m4_on_gp5.930404
19b.b7x1 m4_on_gp5.9440504
20b.b7x2 m4_on_gp3.821250408
21b.l7x4 m4_on_gp4.1750409
22b.b8x3 m4_on_gp4.318120406
23b.b8x4 m4_on_gp5.458750606
24b.b9x4 m4_on_gp6.873750409
25b.l9x3 m4_on_gp7.40350509
26b.l9x6 m4_on_gp5.23250908
27b.b10x5 m4_on_gp5.381670609
28b.l11x2 m4_on_gp8.703750409
29b.b12x3 m4_on_gp3.459370408
30b.b12x6 m4_on_gp7.73750708
31b.b13x7 m4_on_gp7.6980507
32b.l13x3 m4_on_gp8.2580509
33b.l13x6 m4_on_gp5.4060509
34b.l13x7 m4_on_gp4.15350509
35b.b14x3 m4_on_gp4.870630405
36b.b14x5 m4_on_gp3.465630405
37b.b15x1 m4_on_gp5.882140709
38b.b15x2 m4_on_gp8.12750406
39b.b15x3 m4_on_gp4.528750409
40b.l15x1 m4_on_gp5.609380407
41b.l15x2 m4_on_gp5.67250509
42b.b16x4 m4_on_gp8.28050506
43b.b16x5 m4_on_gp5.528750405
44b.b16x6 m4_on_gp8.85150508
45b.b17x5 m4_on_gp7.693120407
46b.b17x7 m4_on_gp8.463130408
47b.l17x3 m4_on_gp8.151670609
48b.l17x6 m4_on_gp7.603750409
49b.b18x3 m4_on_gp5.425620408
50b.b18x5 m4_on_gp6.061250405
51b.l18x1 m4_on_gp5.980940806
52b.l18x2 m4_on_gp5.561880407
53b.b19x2 m4_on_gp7.344640706
54b.b19x4 m4_on_gp5.3750408
55b.l19x2 m4_on_gp6.010509
56b.b20x4 m4_on_gp10.13950508
57b.b20x6 m4_on_gp7.69950506
58b.b21x1 m4_on_gp8.976880407
59b.b21x2 m4_on_gp3.1350506
60b.b21x5 m4_on_gp6.1250404
61b.b21x7 m4_on_gp6.98450505
62b.b22x5 m4_on_gp5.77150507
63b.l22x5 m4_on_gp7.4580509
64b.b23x1 m4_on_gp4.178750405
65b.b23x6 m4_on_gp7.2950607
66b.l23x1 m4_on_gp8.239370406
67b.b24x4 m4_on_gp7.403750406
68b.b24x6 m4_on_gp6.321880408
69b.l24x3 m4_on_gp3.769380405
70b.l25x3 m4_on_gp8.7070509
71b.l25x6 m4_on_gp11.55870408
72b.l26x5 m4_on_gp5.53750405
73b.l27x1 m4_on_gp10.54710709
74b.l27x2 m4_on_gp7.101250409
75b.b28x3 m4_on_gp4.816870407
76b.b28x4 m4_on_gp7.616250406
77b.b28x6 m4_on_gp8.254170609
78g.h1x11 m4_on_gp2.350630409
79g.h2x11 m4_on_gp9.440630406
80g.ctx3 m4_on_gp8.059370409
81g.ctx6 m4_on_gp5.289380406
82g.ctx9 m4_on_gp3.62250406
83g.ctx14 m4_on_gp5.218750409
84g.ctx16 m4_on_gp5.20950508
85G.HN.11 m4_on_gp2.041870402
86G.HN.37 m4_on_gp2.449380403
87G.S1.02 m4_on_gp5.04650505
88G.S1.05 m4_on_gp6.20250409
89G.S1.06 m4_on_gp4.28850508
90G.H1.01 m4_on_gp5.330630409
91G.S2.05 m4_on_gp5.3240503
92G.S2.08 m4_on_gp7.83750405
93G.S3.01 m4_on_gp5.016870404
94G.S3.03 m4_on_gp8.536880407
95G.S3.04 m4_on_gp8.618750406
96G.S3.06 m4_on_gp9.018750405
97G.S3.08 m4_on_gp4.763120409
98G.s3h2.03 m4_on_gp4.53450509
99G.H2.06 m4_on_gp6.002140709
100G.H2.07 m4_on_gp5.444580609
101G.h2s4.01 m4_on_gp7.04850509
102G.S4.04 m4_on_gp6.553130409
103G.s4h3.01 m4_on_gp5.728120407
104G.s4h3.04 m4_on_gp5.32750708
105G.s4h3.08 m4_on_gp2.2450408
106G.H3.01 m4_on_gp5.551250409
107G.H3.09 m4_on_gp6.786250609
108G.H3.17 m4_on_gp7.260605
109G.H3.18 m4_on_gp5.6680509
110G.S5.05 m4_on_gp4.341250609
111G.S5.06 m4_on_gp6.241870408
112G.s5hg.01 m4_on_gp4.066250409
113G.HG.04 m4_on_gp4.84450509
114G.HG.15 m4_on_gp5.228750407
115G.hgh4.02 m4_on_gp5.970707
116G.hgh4.05 m4_on_gp9.141250407
117G.H4.03 m4_on_gp6.738130404
118G.H4.10 m4_on_gp9.960406
119G.H4.12 m4_on_gp5.273130405
120G.H4.15 m4_on_gp6.77250408
121G.S6.02 m4_on_gp5.361670607
122G.S6.05 m4_on_gp4.415630404
123G.s6h5.01 m4_on_gp5.164370409
124G.s6h5.02 m4_on_gp2.123750407
125G.H5.03 m4_on_gp5.6050408
126G.H5.08 m4_on_gp6.538750408
127G.H5.13 m4_on_gp6.034370408
128G.H5.14 m4_on_gp4.078750407
1291x54 m4_on_gp4.496877.72428
1302x66 m4_on_gp2.9619.675525
1313x37 m4_on_gp5.908129.555429
1323x49 m4_on_gp6.939510.6333539
1334x50 m4_on_gp4.756887.63429
134E2.V180 m4_on_gp5.894378.59667435
135E2.F189 m4_on_gp6.65756.4438
1365x36 m4_on_gp3.671256.74333437
1375x41 m4_on_gp3.568127.92333437
1385x48 m4_on_gp4.508758.25618
1395x51 m4_on_gp3.653124.17667438
1405x58 m4_on_gp5.732088.16639
1416x29 m4_on_gp5.39255.82517
1426x52 m4_on_gp7.402517.785429
1436x59 m4_on_gp4.366885.19427
144E3.I430 m4_on_gp4.257510.35536
1457x53 m4_on_gp5.281678.80667639
1468x53 m4_on_gp2.918127.02333439
1471x31 m4_on_gp1.00754.1410
148I1x50 Shared7.834388.366459
1492x40 Shared4.76255.118559
1502x42 Shared4.20755.84833568
1512x46 Shared5.1874.855549
1522x50 Shared8.203757.3449
1532x57 Shared4.8946.06559
1542x60 Shared8.389387.53167468
155E1x50 Shared8.027088.38143679
156E1x51 Shared3.4037.116555
1573x28 Shared6.10459.9425547
1583x32 Shared6.53059.09549
1593x33 Shared7.996512.63549
1603x50 Shared6.37756.93667569
1613x51 Shared8.546.4449
162I2x53 Shared9.21557.642559
163I2x57 Shared9.7579.194559
1644x57 Shared9.61959.5175548
1654x64 Shared7.57255.5975447
166E2.R178 Shared5.666879.9375445
167E2x52 Shared5.6877.75547
168E2.Q188 Shared5.976257.6925448
1695x47 Shared8.3554210.118659
1706x30 Shared4.15254.8825449
1716x44 Shared4.793758.5625649
1726x48 Shared6.040569.17143979
1736x51 Shared6.657928.0525649
1747x34 Shared5.275629.525446
1757x38 Shared7.8283310.7383667
1767x39 Shared4.536877.28459
1777x42 Shared7.15356.475589
1787x45 Shared8.338757.23449
1798x50 Shared7.351257.44459
1808x54 Shared4.626874.66449
181Lig Shared6.2582110.266414110
1822x44 m4_off6.55255.4125248
1832x53 m4_off6.43756.235349
1843x56 m4_off2.43753.355247
185E2x50 m4_off9.02756.9675249
1866x54 m4_off3.034174.855347
1877x49 m4_off8.839177.5475349
1888x56 m4_off1.01752.065246
   
Orange: nodes, hubs and links specific of m4_on_gp network

Green: nodes, hubs and links shared by both networks

Purple: nodes, hubs and links specific of m4_off network

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Owner: the name of the network the link belong to or "Shared" if the corresponding link is present in both networks.

Recurrence: the relative Recurrence in the filtered pool of shortest paths.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.


Index Node1 Node2 Owner m4_on_gp Recurrence m4_off Recurrence m4_on_gp Hub1? m4_off Hub1? m4_on_gp Hub2? m4_off Hub2? ConSurf1 ConSurf2
1b.1x12 b.1x9 m4_on_gp19.99980NoNoNoNo64
2b.1x5 b.1x9 m4_on_gp13.30190NoNoNoNo34
3b.1x12 g.h1x11 m4_on_gp13.37260NoNoYesNo69
4b.1x15 b.1x19 m4_on_gp36.21340NoNoNoNo76
5b.1x12 b.1x15 m4_on_gp34.30310NoNoNoNo67
6b.1x19 b.b21x1 m4_on_gp44.80590NoNoYesNo67
7b.b17x7 b.b21x1 m4_on_gp46.68320YesNoYesNo87
8b.b17x7 b.b20x6 m4_on_gp50.47430YesNoYesNo86
9b.b19x4 b.b20x6 m4_on_gp20.64660YesNoYesNo86
10b.b19x4 b.l17x3 m4_on_gp30.50310YesNoYesNo89
11b.l17x3 b.l19x2 m4_on_gp53.34660YesNoYesNo99
12b.l17x5 b.l19x2 m4_on_gp76.49950NoNoYesNo69
13b.l17x5 b.l19x1 m4_on_gp76.80730NoNoNoNo69
14b.l17x6 b.l19x1 m4_on_gp38.82540YesNoNoNo99
15G.H2.06 b.l17x6 m4_on_gp38.43710YesNoYesNo99
16G.H2.06 b.l9x6 m4_on_gp77.4390YesNoYesNo98
17b.l5x5 b.l7x2 m4_on_gp12.30350YesNoNoNo99
18b.l3x1 b.l5x5 m4_on_gp16.8860NoNoYesNo99
19b.b2x1 b.l3x1 m4_on_gp16.61620YesNoNoNo89
20b.b2x1 b.l27x1 m4_on_gp16.19540YesNoYesNo89
21b.l25x6 b.l27x1 m4_on_gp10.13460YesNoYesNo89
22b.l23x1 b.l25x6 m4_on_gp10.05230YesNoYesNo68
23b.b20x4 b.b20x6 m4_on_gp41.28270YesNoYesNo86
24b.b20x4 b.l17x3 m4_on_gp21.59320YesNoYesNo89
25b.b20x2 b.b20x4 m4_on_gp21.59230NoNoYesNo68
26b.b20x2 b.l19x2 m4_on_gp22.22030NoNoYesNo69
27b.b18x1 b.l19x1 m4_on_gp38.28960NoNoNoNo99
28G.H2.06 b.b18x1 m4_on_gp38.43730YesNoNoNo99
29G.H2.07 b.l9x6 m4_on_gp87.29550YesNoYesNo98
30G.H2.07 G.h2s4.01 m4_on_gp44.21060YesNoYesNo99
31b.b10x1 b.l9x6 m4_on_gp16.55760NoNoYesNo98
32b.b10x1 b.b11x5 m4_on_gp16.4010NoNoNoNo96
33b.b11x5 b.b14x3 m4_on_gp11.83050NoNoYesNo65
34b.b26x1 b.l27x1 m4_on_gp13.6010NoNoYesNo99
35b.b26x1 b.b26x2 m4_on_gp13.4650NoNoNoNo97
36b.b26x2 b.b2x3 m4_on_gp13.33350NoNoYesNo76
37b.b22x1 b.l25x6 m4_on_gp13.92550NoNoYesNo88
38b.b22x1 b.b22x2 m4_on_gp13.87490NoNoNoNo88
39b.b22x2 b.b26x3 m4_on_gp13.73860NoNoNoNo86
40G.H2.07 G.S3.08 m4_on_gp38.12770YesNoYesNo99
41b.b18x5 b.b19x2 m4_on_gp10.20620YesNoYesNo56
42b.1x11 g.h1x11 m4_on_gp10.50090NoNoYesNo89
43G.S5.05 G.s6h5.01 m4_on_gp89.56870YesNoYesNo99
44G.S5.07 G.s6h5.01 m4_on_gp91.53110NoNoYesNo99
45G.S5.07 G.s5hg.01 m4_on_gp92.15810NoNoYesNo99
46G.s4h3.02 G.s5hg.01 m4_on_gp95.03520NoNoYesNo99
47G.HG.07 G.s4h3.02 m4_on_gp95.46830NoNoNoNo99
48G.HG.07 G.s4h3.04 m4_on_gp95.65770NoNoYesNo98
49G.HG.04 G.s4h3.04 m4_on_gp32.55250YesNoYesNo98
50G.HG.04 G.s4h3.01 m4_on_gp33.46540YesNoYesNo97
51G.S5.06 G.s4h3.01 m4_on_gp33.42420YesNoYesNo87
52G.S5.04 G.S5.06 m4_on_gp33.58850NoNoYesNo98
53G.H3.09 G.S5.04 m4_on_gp33.64110YesNoNoNo99
54G.H3.09 G.S4.04 m4_on_gp99.95230YesNoYesNo99
55G.H3.12 G.S4.04 m4_on_gp1000NoNoYesNo89
56G.H3.12 G.S1.07 m4_on_gp77.89820NoNoNoNo89
57G.S1.05 G.S1.07 m4_on_gp77.88170YesNoNoNo99
58G.S1.05 G.S3.08 m4_on_gp38.18790YesNoYesNo99
59G.HG.15 G.s4h3.04 m4_on_gp32.36490YesNoYesNo78
60G.HG.15 G.hgh4.02 m4_on_gp32.6470YesNoYesNo77
61G.H3.06 G.hgh4.02 m4_on_gp65.51070NoNoYesNo67
62G.H3.06 G.H4.15 m4_on_gp65.6190NoNoYesNo68
63G.H3.09 G.H4.15 m4_on_gp65.79980YesNoYesNo98
64G.hgh4.01 G.s4h3.04 m4_on_gp32.21670NoNoYesNo68
65G.hgh4.01 G.hgh4.02 m4_on_gp32.27240NoNoYesNo67
66G.S1.05 G.h2s4.01 m4_on_gp39.64050YesNoYesNo99
67G.H5.10 G.S6.02 m4_on_gp81.53150NoNoYesNo67
68G.H5.10 G.S5.03 m4_on_gp81.74290NoNoNoNo68
69G.S5.03 G.S5.05 m4_on_gp82.16780NoNoYesNo89
70G.H3.12 G.H3.18 m4_on_gp22.82260NoNoYesNo89
71G.H3.15 G.H3.18 m4_on_gp22.43660NoNoYesNo89
726x29 G.H5.13 m4_on_gp79.50990YesNoYesNo78
73G.H5.13 G.S6.02 m4_on_gp79.75960YesNoYesNo87
743x50 G.H5.25 m4_on_gp73.26820YesYesNoNo97
75G.H5.20 G.H5.25 m4_on_gp73.48460NoNoNoNo97
766x29 G.H5.20 m4_on_gp76.29030YesNoNoNo79
773x43 7x53 m4_on_gp47.21950NoNoYesNo99
783x50 7x53 m4_on_gp56.46850YesYesYesNo99
796x44 6x48 m4_on_gp31.84951.82512YesYesYesYes99
803x43 6x44 m4_on_gp39.08871.51751NoNoYesYes99
81G.H3.17 b.l25x6 m4_on_gp13.97540YesNoYesNo58
82b.b19x2 b.b20x6 m4_on_gp10.51030YesNoYesNo66
83G.H3.15 G.H3.17 m4_on_gp22.23540NoNoYesNo85
846x48 Lig Shared29.790789.5497YesYesYesYes90
853x33 Lig m4_off3.8136122.0655YesYesYesYes90
866x51 Lig m4_off0.50559727.4875YesYesYesYes90
876x51 7x38 m4_off0.051984413.9611YesYesYesYes97
886x52 Lig m4_off024.8175YesNoYesYes90
897x42 Lig m4_off048.0477YesYesYesYes90
901x35 1x39 m4_off010.4503NoNoNoNo77
911x39 7x39 m4_off1.430513.9037NoNoYesYes79
922x60 7x38 m4_off1.7127321.5856YesYesYesYes87
937x39 7x42 m4_off3.3539316.6311YesYesYesYes99
942x57 7x42 m4_off0.10273913.0875YesYesYesYes99
951x54 2x44 m4_off1.9473810.1878YesNoNoYes88
961x57 2x44 m4_off2.1904316.1964NoNoNoYes98
971x57 2x40 m4_off2.4333917.1971NoNoYesYes99
982x40 2x43 m4_off8.9376381.3674YesYesNoNo98
992x43 7x53 m4_off9.1782283.0818NoNoYesNo89
1006x40 7x53 m4_off0.36575788.0814NoNoYesNo99
1016x40 7x49 m4_off096.4277NoNoNoYes99
1027x45 7x49 m4_off0.08234491.1328YesYesNoYes99
1036x48 7x45 m4_off0.07759577.1553YesYesYesYes99
1042x50 7x46 m4_off1.9107957.8419YesYesNoNo99
1052x53 7x46 m4_off1.6791958.2479NoYesNoNo99
1062x53 7x42 m4_off046.9896NoYesYesYes99
1072x50 7x49 m4_off0.029638827.9879YesYesNoYes99
1081x56 8x53 m4_off2.6692319.3339NoNoYesNo99
1098x53 I1x50 m4_off021.1508YesNoYesYes99
1102x40 I1x50 m4_off5.0731528.6441YesYesYesYes99
1111x56 8x54 m4_off2.4262719.7851NoNoYesYes99
1128x50 8x54 m4_off029.3823YesYesYesYes99
1132x40 8x50 m4_off0.97078632.4133YesYesYesYes99
1141x56 8x57 m4_off035.1366NoNoNoNo90
1158x57 CT.Y472 m4_off031.2649NoNoNoNo00
1162x42 4x46 m4_off1.4406464.5681YesYesNoNo89
1172x45 4x46 m4_off0.98812865.6017NoNoNoNo99
1182x45 3x42 m4_off0.073736568.6531NoNoNoNo99
1192x46 3x42 m4_off1.0592469.6538YesYesNoNo99
1202x46 7x49 m4_off0.28192942.5396YesYesNoYes99
1212x42 3x49 m4_off2.7491127.0815YesYesYesNo89
1222x56 3x32 m4_off0.31987814.7855NoNoYesYes99
1233x32 7x38 m4_off0.024974618.2307YesYesYesYes97
1242x60 3x28 m4_off0.022642548.2118YesYesYesYes87
1253x28 3x32 m4_off6.2291959.872YesYesYesYes79
1263x29 E2x50 m4_off012.6118NoNoNoYes89
1273x29 E2x52 m4_off0.27582313.8135NoNoYesYes87
1283x33 E2x52 m4_off3.6287827.4875YesYesYesYes97
1293x28 E1x50 m4_off5.53579100YesYesYesYes79
1302x63 E2.Q184 m4_off0.51132263.4361NoNoNoNo85
131E1x50 E1x51 m4_off3.8636821.7948YesYesYesYes95
132E2.R178 E2.V180 m4_off2.6765640.9605YesYesYesNo55
133E2.P181 E2.V180 m4_off0.7427549.9754NoNoYesNo35
134E2.P181 E2.Q184 m4_off0.50233354.4213NoNoNoNo35
1353x26 E2.R178 m4_off0.98028422.8037NoNoYesYes85
1363x37 4x57 m4_off0.0087771516.4835YesNoYesYes98
1373x37 4x53 m4_off1.2253714.8716YesNoNoNo99
1385x47 6x48 m4_off0.087559436.9822YesYesYesYes99
1395x47 5x51 m4_off0.024635467.4596YesYesYesNo98
1405x51 6x45 m4_off0.2510656.5171YesNoNoNo88
1416x41 6x45 m4_off037.0519NoNoNoNo88
1425x54 6x41 m4_off020.2075NoNoNoNo98
1433x44 5x54 m4_off014.4738NoNoNoNo89
1445x47 6x52 m4_off0.71637624.4894YesYesYesNo99
1453x44 5x50 m4_off0.12511.5946NoNoNoNo89
1462x42 3x46 m4_off5.3180624.6739YesYesNoNo89
1473x46 6x37 m4_off023.3533NoNoNoNo99
1483x49 I2x53 m4_off0.084803321.7825YesNoYesYes99
1493x52 I2x53 m4_off0.25792918.124NoNoYesYes79
1503x51 3x52 m4_off0.027645916.7788YesYesNoNo97
1513x50 6x37 m4_off022.0039YesYesNoNo99
1523x50 6x30 m4_off013.9898YesYesYesYes99
153E2.L190 E2x52 m4_off0.50966816.9674NoNoYesYes57
154E2.F189 E2.L190 m4_off014.0226YesNoNoNo85
1554x64 E2.F189 m4_off0.978810.963YesYesYesNo78
1566x51 7x34 m4_off037.3062YesYesYesYes96
1577x34 E3.I430 m4_off1.7084118.3045YesYesYesNo66
1586x57 E3.I430 m4_off0.73291317.0946NoNoYesNo76
1596x57 6x60 m4_off014.0596NoNoNoNo76
1605x58 6x41 m4_off0.76038914.3138YesNoNoNo98
1616x45 6x49 m4_off0.0084803317.3448NoNoNoNo87
1626x49 6x50 m4_off0.49173214.4738NoNoNoNo79
1636x50 7x40 m4_off0.24588711.5946NoNoNoNo99
1648x56 CT.Y472 m4_off023.4968NoYesNoNo60
1653x26 4x62 m4_off0.7353318.2758NoNoNoNo86
1667x38 Lig m4_off3.8393429.4685YesYesYesYes70
1673x32 7x42 m4_off1.9476829.4685YesYesYesYes99
1682x60 7x42 m4_off031.3633YesYesYesYes89
1692x63 E1x50 m4_off0.037949558.375NoNoYesYes89
1704x57 Lig m4_off1.4479714.2236YesYesYesYes80
1716x44 7x45 m4_off0.71319614.1334YesYesYesYes99
1725x47 6x44 m4_off4.9359813.3705YesYesYesYes99
1732x46 2x50 m4_off6.3858630.0632YesYesYesYes99
1742x53 2x56 m4_off0.32827414.9947NoYesNoNo99

Here, those paths that begin and end at given residue pair(s) or that pass through a residue are used to generate a novel metapath. Such a path filtering is particularly recommended if some information on allosteric residues is available. The selection syntax for a residue pair ("Pairs") is C:C:c534,A:A:?600 (the lower-case "c" stands for cytosine and "?" indicates any non standard amino acid or nucleotide residue). Selection of more than one apical residue pair has the following syntax: C:C:c534,A:A:?600,C:C:c534,A:A:E41. Only one residue can be selected as a tail ("Tail"). For midway residue(s), each residue must be separated by a comma as well e.g. A:A:?600,A:A:E41.

Midway



Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Node1Node2OwnerNet1LinkStrengthNet2LinkStrengthComm1Comm2Node1ShellNode2Shell
3x33LigShared20.218.5551110
3x36LigShared7.676.82751110
4x57LigShared8.7311.59751110
5x461LigShared5.032.98750010
6x48LigShared13.098.93751110
6x51LigShared12.7311.15251110
6x52Ligm4_off11.400110
7x38LigShared17.977.85751110
7x41LigShared7.094.87251110
7x42Ligm4_off5.9901110
2x532x56Shared7.746.191022
2x537x42m4_off4.8401021
2x563x32Shared10.319.941121
2x567x42Shared7.636.99751121
2x577x39Shared8.144.36251122
2x577x42Shared4.797.781121
2x603x28Shared6.755.3051022
2x607x38Shared17.8717.62251021
2x607x39m4_off4.8201022
2x607x42m4_off5.9601021
3x283x32Shared13.44.18750021
3x327x38Shared5.752.8751111
3x327x42Shared6.910.9151111
3x334x57Shared14.4713.86251111
3x33E2x52Shared10.885.65251112
3x337x38Shared4.965.461111
3x366x48Shared4.943.39751111
3x374x53Shared8.945.58750112
3x374x57Shared10.178.4750111
4x574x61m4_off4.701112
4x61E2x52Shared4.422.9450022
E2.V180E2x51Shared11.810.48750021
5x475x48Shared8.259.031122
5x476x44Shared4.294.8251122
5x476x48Shared6.016.0151121
5x476x52Shared24.1717.21751121
6x446x48Shared19.047.5151121
6x447x45Shared4.834.22751122
6x476x48Shared4.853.3351121
6x477x45Shared7.319.871122
6x487x41Shared11.758.16251111
6x487x45Shared4.529.041112
6x517x34m4_off6.7501111
6x517x38Shared8.946.4551111
6x54E3.I430Shared7.294.00751122
6x547x34Shared5.822.911121
6x587x34Shared7.914.80250021
7x34E3.I430Shared17.628.5151112
7x387x42Shared8.946.71111
7x397x42Shared6.753.3751121
6x516x55Shared3.796.6251112
3x414x53m4_off3.0700022
5x44Ligm4_off3.0200010
6x61E3.S428m4_off1.7200021
3x32Ligm4_on_gp04.7351110
3x336x51m4_on_gp06.45251111
3x373x41m4_on_gp05.60750112
3x37Ligm4_on_gp03.96250110
3x406x44m4_on_gp04.58750122
3x406x48m4_on_gp04.290121
4x564x57m4_on_gp05.97750021
4x575x43m4_on_gp08.1851112
5x486x52m4_on_gp03.48750121
6x486x52m4_on_gp03.67251111
6x516x52m4_on_gp05.23251111
6x517x41m4_on_gp04.031111
E2x51Ligm4_on_gp07.9250010
7x34Ligm4_on_gp04.8751110
7x31Ligm4_on_gp02.55750010
5x445x48m4_on_gp02.00250012
E3.S428Ligm4_on_gp00.77250010

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Difference Members
Id Description
m4_on_gp 7TRS-M4-Acetylcholine-Gi1/β1/γ2
7V6A-M4-PubChem 9864275-Gi1/β1/γ2
8E9X-M4-2-Deoxycytidine-chim(NtGi1-Go)/β1/γ2
7TRK-M4-Iperoxo-Gi1/β1/γ2
m4_off 5DSG-M4-Tiotropium
Network Difference
Value m4_on_gp m4_off
Imin 2.87 4.05
Number of Linked Nodes 892 269
Number of Specific Nodes 631 (70.74%) 8  (2.97%)
Number of Shared Nodes 261 (29.26%) 261  (97.03%)
Number of Links 1099 300
Number of Specific Links 903 (82.17%) 104  (34.67%)
Number of Shared Links 196 (17.83%) 196  (65.33%)
Number of Hubs 181 41
Number of Specific Hubs 147 (81.22%) 7  (17.07%)
Number of Shared Hubs 34 (18.78%) 34  (82.93%)
Average % Shared Neighbours (Jaccard) 14.66
Average % Shared Neighbours (Otsuka) 17.25
Average % Shared Neighbours (Overlap Coefficient) 19.90
Average % Shared Cliques (k3-6) 53.19
Graphlets Similarity 0.728562
Paths Difference
Value m4_on_gp m4_off
Number Of Nodes in MetaPath 79 82
Specific Nodes in MetaPath 74 (93.67%) 77  (93.90%)
Shared Nodes in MetaPath 261 (29.26%) 261  (29.26%)
Number Of Links MetaPath 84 91
Specific Links in MetaPath 83 (98.81%) 90  (98.90%)
Shared Links in MetaPath 196 (17.83%) 196  (17.83%)
Number of Shortest Paths 3172939 68650
Length Of Smallest Path 3 3
Average Path Length 36.4389 14.3112
Length of Longest Path 61 30
Minimum Path Strength 0.38625 1.185
Average Path Strength 5.91246 7.57622
Maximum Path Strength 21.5913 18.5933
Minimum Path Correlation 0.7 0.7
Average Path Correlation 0.984989 0.931279
Maximum Path Correlation 1 0.99
Minimum % Of Corr. Nodes 1.72414 4.16667
Average % Of Corr. Nodes 31.8023 49.5704
Maximum % Of Corr. Nodes 100 100
Minimum Path Hubs % 0 0
Average Path Hubs % 56.1653 48.1099
Maximum Path Hubs % 100 100

Details about the values in these tables can be found in the corresponding documentation page .

You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

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