CodeDLE
NameD-Leucine
Synonyms(R)-leucine
Identifier
FormulaC6 H13 N O2
Molecular Weight131.173
SMILES
PubChem6950207
Formal Charge0
Total Atoms22
Total Chiral Atoms1
Total Bonds21
Total Aromatic Bonds0
Networks6
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This ligand is also present in the following 6 networks:

Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9YDP A Peptide Opioid DOP Homo Sapiens DADLE - chim(NtGi1L-Gs-CtGi1)/Beta1/Gamma2 1.95 2025-12-10 10.1101/2025.10.16.682975

A 2D representation of the interactions of DLE in 9YDP
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?2 L:L:Y1 17.89 3 Yes Yes 0 0 1 2
L:L:Y1 R:R:I277 3.63 3 Yes No 0 5 2 2
L:L:Y1 R:R:V281 6.31 3 Yes No 0 6 2 2
L:L:?2 L:L:G3 6.96 3 Yes No 0 0 1 2
L:L:?2 L:L:?5 13.49 3 Yes No 0 0 1 0
L:L:?2 R:R:I277 4.36 3 Yes No 0 5 1 2
L:L:?2 R:R:I304 8.71 3 Yes Yes 0 5 1 2
L:L:G3 R:R:I304 3.53 3 No Yes 0 5 2 2
L:L:?5 R:R:K214 7.37 0 No Yes 0 5 0 1
L:L:?5 R:R:W284 19.83 0 No No 0 4 0 1
R:R:D210 R:R:K214 9.68 0 No Yes 4 5 2 1
R:R:K214 R:R:V281 7.59 0 Yes No 5 6 1 2
R:R:I289 R:R:W284 5.87 25 Yes No 1 4 2 1
R:R:R291 R:R:W284 27.99 25 No No 1 4 2 1
R:R:I289 R:R:R291 3.76 25 Yes No 1 1 2 2
R:R:K214 R:R:T285 3 0 Yes No 5 4 1 2
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub2.00
Average Interaction Strength13.56
Average Nodes In Shell13.00
Average Hubs In Shell5.00
Average Links In Shell16.00
Average Links Mediated by Hubs In Shell14.00

Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)

Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9YDQ A Peptide Opioid DOP Homo Sapiens DADLE MIPS3614 chim(NtGi1L-Gs-CtGi1)/Beta1/Gamma2 1.94 2025-12-10 10.1101/2025.10.16.682975

A 2D representation of the interactions of DLE in 9YDQ
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?2 L:L:Y1 16.69 2 Yes Yes 0 0 1 2
L:L:Y1 R:R:I277 3.63 2 Yes Yes 0 5 2 2
L:L:Y1 R:R:V281 3.79 2 Yes No 0 6 2 2
L:L:?2 L:L:G3 6.96 2 Yes No 0 0 1 2
L:L:?2 L:L:?5 12.26 2 Yes No 0 0 1 0
L:L:?2 R:R:I277 5.81 2 Yes Yes 0 5 1 2
L:L:?2 R:R:I304 8.71 2 Yes Yes 0 5 1 2
L:L:?5 R:R:K214 11.05 0 No Yes 0 5 0 1
L:L:?5 R:R:W284 18.84 0 No Yes 0 4 0 1
R:R:D210 R:R:K214 9.68 0 No Yes 4 5 2 1
R:R:K214 R:R:V281 7.59 0 Yes No 5 6 1 2
R:R:K214 R:R:T285 3 0 Yes No 5 4 1 2
R:R:F280 R:R:W284 3.01 0 Yes Yes 5 4 2 1
R:R:I289 R:R:W284 4.7 10 Yes Yes 1 4 2 1
R:R:R291 R:R:W284 28.99 10 Yes Yes 1 4 2 1
R:R:I289 R:R:R291 3.76 10 Yes Yes 1 1 2 2
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub3.00
Average Interaction Strength14.05
Average Nodes In Shell14.00
Average Hubs In Shell9.00
Average Links In Shell16.00
Average Links Mediated by Hubs In Shell16.00

Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)

Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9YDR A Peptide Opioid DOP Homo Sapiens DADLE MIPS3983 chim(NtGi1L-Gs-CtGi1)/Beta1/Gamma2 2.14 2025-12-10 10.1101/2025.10.16.682975

A 2D representation of the interactions of DLE in 9YDR
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?2 L:L:Y1 17.89 2 Yes Yes 0 0 1 2
L:L:Y1 R:R:I277 3.63 2 Yes No 0 5 2 2
L:L:Y1 R:R:V281 3.79 2 Yes No 0 6 2 2
L:L:?2 L:L:G3 6.96 2 Yes No 0 0 1 2
L:L:?2 L:L:?5 12.26 2 Yes No 0 0 1 0
L:L:?2 R:R:I277 7.26 2 Yes No 0 5 1 2
L:L:?2 R:R:I304 8.71 2 Yes Yes 0 5 1 2
L:L:G3 R:R:I304 3.53 2 No Yes 0 5 2 2
L:L:?5 R:R:K214 12.28 0 No Yes 0 5 0 1
L:L:?5 R:R:W284 18.84 0 No Yes 0 4 0 1
R:R:D210 R:R:K214 8.3 0 No Yes 4 5 2 1
R:R:K214 R:R:V281 10.62 0 Yes No 5 6 1 2
R:R:K214 R:R:T285 4.5 0 Yes No 5 4 1 2
R:R:F280 R:R:W284 4.01 0 Yes Yes 5 4 2 1
R:R:I289 R:R:W284 5.87 0 No Yes 1 4 2 1
R:R:R291 R:R:W284 26.99 0 No Yes 1 4 2 1
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub3.00
Average Interaction Strength14.46
Average Nodes In Shell14.00
Average Hubs In Shell6.00
Average Links In Shell16.00
Average Links Mediated by Hubs In Shell16.00

Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)

Location of the nodes interacting with this ligand (click to enlarge 🔍)
StatisticsValue
Average Number Of Links3.00
Average Number Of Links With An Hub2.50
Average Interaction Strength14.02
Average Nodes In Shell13.50
Average Hubs In Shell6.00
Average Links In Shell15.00
Average Links Mediated by Hubs In Shell14.17

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Physico-chemical properties of the nodes interacting with this ligand

(Click to enlarge 🔍)

missing image


Location of the nodes interacting with this ligand

(Click to enlarge 🔍)