CodeLPC
Name[1-MYRISTOYL-GLYCEROL-3-YL]PHOSPHONYLCHOLINE
Synonyms
Identifier2-[hydroxy-[(2R)-2-hydroxy-3-tetradecanoyloxy-propoxy]phosphoryl]oxyethyl-trimethyl-azanium
FormulaC22 H47 N O7 P
Molecular Weight468.585
SMILESCCCCCCCCCCCCCC(=O)OC[C@H](CO[P@](=O)(O)OCC[N+](C)(C)C)O
PubChem444675
Formal Charge1
Total Atoms78
Total Chiral Atoms2
Total Bonds77
Total Aromatic Bonds0
Networks1
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This ligand is also present in the following network:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8G2Y B2 Adhesion Adhesion ADGRF1 Homo sapiens - LPC chim(Gs-CtGq)/Beta1/Gamma2 3.44 2023-05-10 10.1038/s41467-023-38083-7

A 2D representation of the interactions of LPC in 8G2Y
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
A:A:Y391 R:R:L678 4.69 0 Yes Yes 4 8 2 2
A:A:Y391 R:R:L681 4.69 0 Yes Yes 4 7 2 1
R:R:H621 R:R:I625 3.98 3 No No 6 7 2 1
R:R:H621 R:R:M699 2.63 3 No Yes 6 7 2 2
R:R:L681 R:R:T622 2.95 0 Yes No 7 7 1 2
R:R:M698 R:R:T622 3.01 3 No No 8 7 1 2
R:R:I625 R:R:M699 2.92 3 No Yes 7 7 1 2
R:R:I625 W:W:?1 3.6 3 No Yes 7 0 1 0
R:R:C626 R:R:W674 2.61 0 No Yes 7 9 1 2
R:R:C626 R:R:L678 3.17 0 No Yes 7 8 1 2
R:R:C626 W:W:?1 2.67 0 No Yes 7 0 1 0
R:R:G702 R:R:W674 2.81 3 Yes Yes 7 9 1 2
R:R:G702 R:R:M677 5.24 3 Yes No 7 6 1 1
R:R:L705 R:R:M677 5.65 0 No No 6 6 2 1
R:R:M677 W:W:?1 9.52 3 No Yes 6 0 1 0
R:R:I680 W:W:?1 15.62 0 No Yes 8 0 1 0
R:R:L681 R:R:R685 6.07 0 Yes No 7 8 1 2
R:R:L681 W:W:?1 9.32 0 Yes Yes 7 0 1 0
R:R:L688 R:R:Y684 5.86 3 No Yes 6 8 1 1
R:R:M693 R:R:Y684 5.99 0 No Yes 5 8 2 1
R:R:M698 R:R:Y684 4.79 3 No Yes 8 8 1 1
R:R:Y684 W:W:?1 2.96 3 Yes Yes 8 0 1 0
R:R:L688 W:W:?1 3.49 3 No Yes 6 0 1 0
R:R:M698 W:W:?1 9.52 3 No Yes 8 0 1 0
R:R:G702 W:W:?1 2.88 3 Yes Yes 7 0 1 0
R:R:G702 R:R:V701 1.84 3 Yes No 7 6 1 2
R:R:H691 R:R:L688 1.29 0 No No 7 6 2 1
StatisticsValue
Average Number Of Links9.00
Average Number Of Links With An Hub3.00
Average Interaction Strength6.62
Average Nodes In Shell21.00
Average Hubs In Shell8.00
Average Links In Shell27.00
Average Links Mediated by Hubs In Shell23.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
StatisticsValue
Average Number Of Links9.00
Average Number Of Links With An Hub3.00
Average Interaction Strength6.62
Average Nodes In Shell21.00
Average Hubs In Shell8.00
Average Links In Shell27.00
Average Links Mediated by Hubs In Shell23.00

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Physico-chemical properties of the nodes interacting with this ligand

(Click to enlarge 🔍)

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Location of the nodes interacting with this ligand

(Click to enlarge 🔍)