Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y10 11.502516
2R:R:E14 9.932516
3R:R:N25 8.0975409
4R:R:L38 4.98429728
5R:R:T42 5.4125429
6R:R:N43 5.365629
7R:R:F45 5.41408
8R:R:D53 7.456519
9R:R:I61 6.155616
10R:R:F75 8.2075402
11R:R:Q90 6.825405
12R:R:D102 7.3025429
13R:R:Y113 7.386526
14R:R:W130 5.986509
15R:R:I136 3.7225404
16R:R:F141 4.03405
17R:R:F173 13.444514
18R:R:Y181 11.272516
19R:R:M182 8.1275414
20R:R:F187 11.8725416
21R:R:F188 4.914515
22R:R:Y202 6.596509
23R:R:W247 9.27617
24R:R:H251 11.15417
25R:R:F259 4.29333614
26R:R:I276 6.4575415
27R:R:H280 7.705417
28R:R:V284 2.7975406
29R:R:N286 9.29419
30R:R:Y290 7.542509
31R:R:Y292 3.768506
32R:R:F297 8.312528
33L:L:?1 9.179171210
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:E14 R:R:I276 19.54075.47YesYes165
2L:L:?1 R:R:I276 44.22694.29YesYes105
3L:L:?1 R:R:N254 21.93176.19YesNo105
4R:R:N254 R:R:V250 21.18454.43NoNo055
5R:R:A275 R:R:V250 19.7251.7NoNo065
6R:R:A275 R:R:P249 18.25561.87NoNo069
7R:R:M274 R:R:P249 13.78261.68NoNo039
8R:R:M274 R:R:W270 12.27344.65NoNo032
9R:R:E14 R:R:I61 14.44018.2YesYes166
10R:R:H280 R:R:I276 16.76633.98YesYes175
11R:R:H280 R:R:I61 14.191110.61YesYes176
12L:L:?1 R:R:W247 1005.13YesYes107
13R:R:N282 R:R:W247 92.837213.56NoYes187
14R:R:N282 R:R:N286 94.799812.26NoYes189
15R:R:D53 R:R:N286 19.38636.73YesYes199
16R:R:D53 R:R:N25 13.508713.46YesYes099
17R:R:S21 R:R:V284 12.1096.46NoYes086
18R:R:A291 R:R:F297 11.5914.16NoYes088
19R:R:F297 R:R:N43 13.6789.67YesYes289
20R:R:N43 R:R:T42 31.60494.39YesYes299
21R:R:D102 R:R:T42 40.32187.23YesYes299
22R:R:D102 R:R:F45 61.35689.55YesYes098
23R:R:F45 R:R:I126 64.01673.77YesNo087
24R:R:I126 R:R:S48 64.86856.19NoNo079
25R:R:S48 R:R:S95 56.13176.52NoNo097
26R:R:L49 R:R:S95 56.93376.01NoNo097
27R:R:L49 R:R:N286 51.882812.36NoYes199
28R:R:A291 R:R:V28 10.15645.09NoNo089
29R:R:L38 R:R:N43 15.07274.12YesYes289
30R:R:T40 R:R:T42 10.7946.28NoYes289
31R:R:P41 R:R:T40 10.31585.25NoNo068
32R:R:I93 R:R:W247 12.009410.57NoYes077
33R:R:I93 R:R:Q90 11.34694.12NoYes075
34R:R:F94 R:R:Q90 17.000414.05NoYes055
35R:R:F94 R:R:L129 16.34794.87NoNo056
36R:R:L129 R:R:W130 16.3184.56NoYes069
37R:R:G57 R:R:I61 11.5715.29NoYes076
38L:L:?1 R:R:F173 32.242533.86YesYes104
39R:R:F173 R:R:L86 27.23156.09YesNo143
40R:R:L86 R:R:Y181 54.03964.69NoYes136
41R:R:P140 R:R:Y181 53.138118.08NoYes046
42R:R:C83 R:R:P140 51.01615.65NoNo064
43R:R:C83 R:R:F141 48.88424.19NoYes065
44R:R:F141 R:R:F80 38.07535.36YesNo054
45R:R:F80 R:R:F84 35.88365.36NoNo044
46R:R:F84 R:R:L88 18.52463.65NoNo046
47R:R:A55 R:R:L88 16.24333.15NoNo066
48R:R:A55 R:R:F59 13.9522.77NoNo065
49L:L:?1 R:R:M182 27.6459.56YesYes104
50R:R:L86 R:R:M182 28.79068.48NoYes134
51R:R:F59 R:R:L58 11.65074.87NoNo056
52R:R:F63 R:R:F84 15.71034.29NoNo054
53R:R:F63 R:R:L81 13.697918.27NoNo056
54R:R:C78 R:R:I67 12.34814.91NoNo194
55L:L:?1 R:R:I67 16.73148.58YesNo104
56R:R:L81 R:R:T66 11.39171.47NoNo064
57R:R:C78 R:R:V176 10.90855.12NoNo091
58R:R:C190 R:R:Q90 15.22226.1NoYes065
59R:R:N286 R:R:Y290 70.89065.81YesYes099
60R:R:D102 R:R:V117 22.51944.38YesNo297
61R:R:L105 R:R:V117 24.14332.98NoNo067
62R:R:L105 R:R:V101 22.70872.98NoNo067
63R:R:L97 R:R:V101 21.26422.98NoNo077
64R:R:R103 R:R:Y202 29.63745.14NoYes099
65R:R:R103 R:R:Y290 30.723310.29NoYes099
66R:R:I239 R:R:Y202 30.055812.09NoYes089
67R:R:I239 R:R:Y290 37.07914.84NoYes089
68R:R:I201 R:R:Y104 12.387915.71NoNo078
69R:R:I197 R:R:I201 13.89222.94NoNo067
70R:R:I197 R:R:L97 15.38652.85NoNo067
71R:R:L236 R:R:Y202 34.23.52NoYes089
72R:R:I205 R:R:L236 10.7844.28NoNo098
73R:R:F185 R:R:Y181 14.664311.35NoYes136
74R:R:F185 R:R:I136 13.87735.02NoYes034
75R:R:C190 R:R:I136 14.15124.91NoYes064
76L:L:?1 R:R:H251 17.84725.8YesYes107
77R:R:F187 R:R:H251 16.656722.63YesYes167
78R:R:F187 R:R:F188 13.36928.57YesYes165
79R:R:V240 R:R:Y202 19.03775.05NoYes089
80R:R:C210 R:R:F206 16.01915.59NoNo055
81R:R:F206 R:R:L236 21.053.65NoNo058
82R:R:C210 R:R:E229 13.30946.08NoNo057
83L:L:?1 R:R:M179 10.20624.25YesNo103
84R:R:S48 R:R:W130 16.13874.94NoYes099
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:E14 R:R:Y10 14.59 1 Yes Yes 6 6 2 2
R:R:S68 R:R:Y10 6.36 0 No Yes 4 6 1 2
R:R:I276 R:R:Y10 12.09 1 Yes Yes 5 6 1 2
R:R:E14 R:R:I276 5.47 1 Yes Yes 6 5 2 1
R:R:E14 R:R:H280 14.77 1 Yes Yes 6 7 2 2
R:R:C78 R:R:I67 4.91 1 No No 9 4 2 1
R:R:C171 R:R:I67 4.91 1 No No 9 4 2 1
L:L:?1 R:R:I67 8.58 1 Yes No 0 4 0 1
L:L:?1 R:R:S68 11.28 1 Yes No 0 4 0 1
R:R:C171 R:R:C78 7.28 1 No No 9 9 2 2
R:R:F173 R:R:L86 6.09 1 Yes No 4 3 1 2
R:R:L86 R:R:M182 8.48 1 No Yes 3 4 2 1
L:L:?1 R:R:T89 6.64 1 Yes No 0 6 0 1
R:R:I93 R:R:W247 10.57 0 No Yes 7 7 2 1
R:R:F173 R:R:V177 17.04 1 Yes No 4 3 1 2
R:R:F173 R:R:M182 7.46 1 Yes Yes 4 4 1 1
L:L:?1 R:R:F173 33.86 1 Yes Yes 0 4 0 1
R:R:E174 R:R:M179 4.06 0 No No 5 3 2 1
R:R:M179 R:R:N254 5.61 1 No No 3 5 1 1
L:L:?1 R:R:M179 4.25 1 Yes No 0 3 0 1
R:R:M182 R:R:N186 7.01 1 Yes No 4 5 1 1
L:L:?1 R:R:M182 9.56 1 Yes Yes 0 4 0 1
R:R:H251 R:R:N186 5.1 1 Yes No 7 5 1 1
L:L:?1 R:R:N186 10.32 1 Yes No 0 5 0 1
R:R:F187 R:R:V191 6.55 1 Yes No 6 7 2 2
R:R:F187 R:R:H251 22.63 1 Yes Yes 6 7 2 1
R:R:H251 R:R:V191 11.07 1 Yes No 7 7 1 2
R:R:F243 R:R:W247 15.03 0 No Yes 9 7 2 1
R:R:C246 R:R:W247 3.92 1 No Yes 8 7 2 1
R:R:C246 R:R:N282 7.87 1 No No 8 8 2 2
R:R:S279 R:R:W247 7.41 0 No Yes 7 7 2 1
R:R:N282 R:R:W247 13.56 1 No Yes 8 7 2 1
L:L:?1 R:R:W247 5.13 1 Yes Yes 0 7 0 1
R:R:N254 R:R:V250 4.43 1 No No 5 5 1 2
L:L:?1 R:R:H251 5.8 1 Yes Yes 0 7 0 1
L:L:?1 R:R:N254 6.19 1 Yes No 0 5 0 1
L:L:?1 R:R:M272 4.25 1 Yes No 0 4 0 1
R:R:H280 R:R:I276 3.98 1 Yes Yes 7 5 2 1
L:L:?1 R:R:I276 4.29 1 Yes Yes 0 5 0 1
R:R:M272 R:R:V253 3.04 0 No No 4 4 1 2
R:R:A82 R:R:F173 2.77 0 No Yes 5 4 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8HDO_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.65
Number of Linked Nodes 248
Number of Links 273
Number of Hubs 33
Number of Links mediated by Hubs 136
Number of Communities 2
Number of Nodes involved in Communities 44
Number of Links involved in Communities 66
Path Summary
Number Of Nodes in MetaPath 85
Number Of Links MetaPath 84
Number of Shortest Paths 44725
Length Of Smallest Path 3
Average Path Length 13.7902
Length of Longest Path 35
Minimum Path Strength 1.385
Average Path Strength 6.99293
Maximum Path Strength 25.45
Minimum Path Correlation 0.7
Average Path Correlation 0.922657
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.44828
Average % Of Corr. Nodes 42.0905
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 41.564
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • D1 dopamine receptor binding   • protein binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • molecular function regulator activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • enzyme regulator activity   • molecular function activator activity   • phosphorus-oxygen lyase activity   • cyclase regulator activity   • enzyme activator activity   • cyclase activator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • adenylate cyclase activator activity   • adenylate cyclase activity   • cation binding   • metal ion binding   • developmental process   • multicellular organismal process   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development
Gene OntologyBiological Process• developmental process   • multicellular organismal process   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • anatomical structure development   • anatomical structure formation involved in morphogenesis   • ectodermal placode development   • hair cycle process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of smell   • cellular response to stimulus   • cellular response to nitrogen compound   • response to stimulus   • response to endogenous stimulus   • response to peptide hormone   • cellular response to peptide hormone stimulus   • response to oxygen-containing compound   • response to nitrogen compound   • response to glucagon   • cellular response to oxygen-containing compound   • cellular response to glucagon stimulus   • cellular response to endogenous stimulus   • cellular response to chemical stimulus   • response to hormone   • response to chemical   • cellular process   • cellular response to hormone stimulus   • multicellular organism development   • skeletal system development   • bone development   • system development   • regulation of body fluid levels   • wound healing   • homotypic cell-cell adhesion   • cell activation   • hemostasis   • biological regulation   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • response to stress   • coagulation   • regulation of biological quality   • response to wounding   • platelet activation   • response to fluid shear stress   • vascular endothelial cell response to laminar fluid shear stress   • response to laminar fluid shear stress   • cellular response to stress   • cellular response to laminar fluid shear stress   • vascular endothelial cell response to fluid shear stress   • cellular response to fluid shear stress   • cognition   • developmental growth   • growth   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • regulation of biological process   • regulation of cellular process   • signaling   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • homeostatic process   • positive regulation of biological process   • adaptive thermogenesis   • positive regulation of metabolic process   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • positive regulation of multicellular organismal process   • metabolic process   • regulation of multicellular organismal process   • regulation of metabolic process   • positive regulation of cellular process   • protein localization   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • localization   • cellular macromolecule localization   • regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • cellular localization   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • hormone secretion   • protein localization to extracellular region   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • regulation of protein transport   • peptide transport   • protein transport   • regulation of cellular localization   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • establishment of localization in cell   • intracellular transport   • regulation of defense response   • regulation of response to external stimulus   • negative regulation of inflammatory response   • negative regulation of biological process   • inflammatory response to antigenic stimulus   • regulation of response to stress   • regulation of immune system process   • negative regulation of inflammatory response to antigenic stimulus   • defense response   • immune response   • negative regulation of response to stimulus   • negative regulation of immune response   • regulation of inflammatory response to antigenic stimulus   • response to external stimulus   • regulation of inflammatory response   • regulation of response to stimulus   • negative regulation of immune system process   • immune system process   • negative regulation of response to external stimulus   • negative regulation of defense response   • regulation of immune response   • inflammatory response   • positive regulation of adenylate cyclase activity   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of cyclase activity   • activation of adenylate cyclase activity   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • positive regulation of catalytic activity   • positive regulation of lyase activity   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • cellular response to monoamine stimulus   • renal system process   • chemical homeostasis   • multicellular organismal-level water homeostasis   • multicellular organismal-level chemical homeostasis   • renal water homeostasis   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • intracellular anatomical structure   • cytoplasm   • cytosol   • Golgi apparatus subcompartment   • Golgi apparatus   • organelle subcompartment   • trans-Golgi network membrane   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • trans-Golgi network   • organelle membrane   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation   • molecular transducer activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • G protein-coupled adenosine receptor activity   • regulation of tube diameter   • regulation of tube size   • circulatory system process   • vascular process in circulatory system   • blood vessel diameter maintenance   • regulation of biological quality   • vasodilation   • blood circulation   • regulation of anatomical structure size   • positive regulation of biological process   • positive regulation of macromolecule biosynthetic process   • positive regulation of metabolic process   • positive regulation of biosynthetic process   • regulation of cytokine production   • cytokine production   • regulation of multicellular organismal process   • positive regulation of macromolecule metabolic process   • positive regulation of cellular process   • regulation of biosynthetic process   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • regulation of chemokine production   • regulation of gene expression   • biosynthetic process   • positive regulation of gene expression   • chemokine production   • positive regulation of chemokine production   • positive regulation of multicellular organismal process   • regulation of macromolecule biosynthetic process   • metabolic process   • macromolecule metabolic process   • positive regulation of cytokine production   • regulation of metabolic process   • positive regulation of chronic inflammatory response   • regulation of defense response   • chronic inflammatory response   • regulation of response to external stimulus   • regulation of chronic inflammatory response to non-antigenic stimulus   • chronic inflammatory response to non-antigenic stimulus   • positive regulation of response to stimulus   • positive regulation of response to external stimulus   • positive regulation of inflammatory response   • positive regulation of chronic inflammatory response to non-antigenic stimulus   • response to stress   • regulation of response to stress   • regulation of chronic inflammatory response   • defense response   • regulation of inflammatory response   • response to external stimulus   • regulation of response to stimulus   • positive regulation of defense response   • inflammatory response   • establishment of organelle localization   • regulated exocytosis   • cellular localization   • transport   • cell activation involved in immune response   • leukocyte degranulation   • myeloid leukocyte activation   • myeloid leukocyte mediated immunity   • vesicle-mediated transport   • leukocyte activation   • localization   • secretion by cell   • organelle localization   • leukocyte activation involved in immune response   • establishment of localization in cell   • mast cell activation   • leukocyte mediated immunity   • mast cell mediated immunity   • immune response   • secretion   • cell activation   • vacuolar localization   • export from cell   • mast cell degranulation   • establishment of localization   • myeloid cell activation involved in immune response   • immune effector process   • mast cell activation involved in immune response   • exocytosis   • immune system process   • lysosome localization   • trans-synaptic signaling   • regulation of signaling   • modulation of chemical synaptic transmission   • presynaptic modulation of chemical synaptic transmission   • chemical synaptic transmission   • regulation of trans-synaptic signaling   • anterograde trans-synaptic signaling   • regulation of cell communication   • regulation of vascular endothelial growth factor production   • vascular endothelial growth factor production   • positive regulation of vascular endothelial growth factor production   • interleukin-6 production   • positive regulation of interleukin-6 production   • regulation of interleukin-6 production   • regulation of immune effector process   • regulation of localization   • regulation of myeloid leukocyte mediated immunity   • positive regulation of leukocyte degranulation   • positive regulation of regulated secretory pathway   • regulation of immune system process   • positive regulation of mast cell degranulation   • positive regulation of immune system process   • regulation of secretion   • regulation of leukocyte mediated immunity   • positive regulation of secretion by cell   • positive regulation of exocytosis   • regulation of mast cell degranulation   • regulation of regulated secretory pathway   • regulation of secretion by cell   • positive regulation of secretion   • positive regulation of immune effector process   • regulation of leukocyte degranulation   • regulation of transport   • regulation of vesicle-mediated transport   • positive regulation of transport   • regulation of exocytosis   • regulation of system process   • negative regulation of biological process   • negative regulation of muscle contraction   • smooth muscle contraction   • regulation of smooth muscle contraction   • negative regulation of smooth muscle contraction   • relaxation of smooth muscle   • muscle contraction   • muscle system process   • regulation of muscle system process   • relaxation of muscle   • relaxation of vascular associated smooth muscle   • regulation of muscle contraction   • negative regulation of multicellular organismal process   • positive regulation of adenylate cyclase activity   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of cyclase activity   • activation of adenylate cyclase activity   • regulation of adenylate cyclase activity   • regulation of catalytic activity   • positive regulation of catalytic activity   • positive regulation of lyase activity   • cGMP-mediated signaling   • positive regulation of cell communication   • positive regulation of signal transduction   • regulation of signal transduction   • positive regulation of cGMP-mediated signaling   • regulation of intracellular signal transduction   • regulation of cGMP-mediated signaling   • positive regulation of intracellular signal transduction   • positive regulation of signaling   • Schaffer collateral - CA1 synapse   • presynapse   • glutamatergic synapse
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeI5D
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeI5D
Name2-[6-azanyl-3,5-dicyano-4-[4-(cyclopropylmethoxy)phenyl]pyridin-2-yl]sulfanylethanamide
Synonyms
Identifier
FormulaC19 H17 N5 O2 S
Molecular Weight379.436
SMILES
PubChem11717831
Formal Charge0
Total Atoms44
Total Chiral Atoms0
Total Bonds46
Total Aromatic Bonds12

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP29275
Sequence
>8HDO_nogp_Chain_R
LETQDALYV ALELVIAAL SVAGNVLVC AAVGTANTL QTPTNYFLV 
SLAAADVAV GLFAIPFAI TISLGFCTD FYGCLFLAC FVLVLTQSS 
IFSLLAVAV DRYLAICVP LRYKSLVTG TRARGVIAV LWVLAFGIG 
LTPFLGWNS KDVKCLFEN VVPMSYMVY FNFFGCVLP PLLIMLVIY 
IKIFLVACR QLQRTTTLQ REIHAAKSL AMIVGIFAL CWLPVHAVN 
CVTLFQPAK PKWAMNMAI LLSHANSVV NPIVYAYRN RDFRYTFHK 
IISRYL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7XY7ANucleotideAdenosineA2BHomo sapiensNECA-chim(NtGi1-Gs)/β1/γ23.262023-05-0310.1126/sciadv.add3709
7XY7 (No Gprot) ANucleotideAdenosineA2BHomo sapiensNECA-3.262023-05-0310.1126/sciadv.add3709
7XY6ANucleotideAdenosineA2BHomo sapiensBAY 60-6583-chim(NtGi1-Gs)/β1/γ22.992023-05-0310.1126/sciadv.add3709
7XY6 (No Gprot) ANucleotideAdenosineA2BHomo sapiensBAY 60-6583-2.992023-05-0310.1126/sciadv.add3709
8HDPANucleotideAdenosineA2BHomo sapiensAdenosine-Gs/β1/γ23.22023-01-1810.1038/s41421-022-00503-1
8HDP (No Gprot) ANucleotideAdenosineA2BHomo sapiensAdenosine-3.22023-01-1810.1038/s41421-022-00503-1
8HDOANucleotideAdenosineA2BHomo sapiensBAY 60-6583-Gs/β1/γ22.872023-01-1810.1038/s41421-022-00503-1
8HDO (No Gprot) ANucleotideAdenosineA2BHomo sapiensBAY 60-6583-2.872023-01-1810.1038/s41421-022-00503-1




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8HDO_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.