Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:R6 11.6875410
2L:L:M8 8.078510
3L:L:L9 4.132520
4L:L:R11 9.01333630
5L:L:Y13 10.9817610
6L:L:R14 6.69420
7R:R:I55 4.3425409
8R:R:Y71 7.838507
9R:R:D79 7.0975409
10R:R:H82 8.214537
11R:R:M86 9.9725408
12R:R:Q92 7.8975415
13R:R:W93 8.304515
14R:R:G97 3.2414
15R:R:W99 8.93667618
16R:R:F101 7.77517
17R:R:D113 8.2575436
18R:R:Q117 8.7325407
19R:R:F118 4.396507
20R:R:Y132 7.43833658
21R:R:F133 6.6275454
22R:R:Q137 7.0425457
23R:R:K149 3.7975404
24R:R:V168 6.365405
25R:R:S183 6.925415
26R:R:F186 5.594525
27R:R:Y197 5.672526
28R:R:F206 7.94833668
29R:R:L210 4.5775467
30R:R:Y256 5.475408
31R:R:Y267 9.375407
32R:R:H268 10.79408
33R:R:F284 3.415404
34R:R:Y288 10.592515
35R:R:Y289 5.112513
36R:R:Y296 15.1925437
37R:R:S299 4.435409
38R:R:S300 4.0475407
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:C7 R:R:P280 17.48123.77NoNo001
2L:L:M8 R:R:P280 18.49273.35YesNo001
3L:L:Y13 R:R:W93 28.041112.54YesYes105
4L:L:C7 L:L:R14 13.687111.14NoYes000
5L:L:M8 R:R:Y288 10.848921.55YesYes105
6L:L:L9 L:L:R14 15.1846.07YesYes200
7L:L:L9 R:R:Y197 16.57713.52YesYes206
8R:R:I292 R:R:Y288 31.44998.46NoYes055
9L:L:R11 R:R:I292 41.19463.76YesNo005
10L:L:R11 R:R:H82 77.79847.9YesYes307
11R:R:L201 R:R:Y197 31.69073.52NoYes056
12R:R:L201 R:R:Q117 32.5545.32NoYes057
13L:L:Y13 R:R:Q92 16.603112.4YesYes105
14L:L:P15 L:L:R14 10.22274.32NoYes000
15R:R:H82 R:R:S299 1004.18YesYes079
16R:R:I83 R:R:S299 11.8533.1NoYes069
17R:R:D79 R:R:S299 98.02888.83YesYes099
18R:R:D79 R:R:N52 29.28235.39YesNo099
19R:R:N52 R:R:P303 25.10286.52NoNo099
20R:R:I55 R:R:P303 21.89043.39YesNo099
21R:R:D79 R:R:L75 89.32539.5YesNo099
22R:R:I123 R:R:L75 48.40125.71NoNo089
23R:R:I123 R:R:N74 47.515711.33NoNo089
24R:R:N154 R:R:N74 41.10939.54NoNo079
25R:R:N154 R:R:Y71 40.16456.98NoYes077
26R:R:D130 R:R:Y71 15.610113.79NoYes087
27R:R:D130 R:R:V67 11.32684.38NoNo086
28R:R:P68 R:R:V67 20.33793.53NoNo076
29R:R:P68 R:R:T66 18.10746.99NoNo077
30R:R:D69 R:R:T66 13.624110.12NoNo087
31R:R:T150 R:R:Y71 18.93364.99NoYes077
32R:R:T150 R:R:V67 11.43812.69NoNo076
33R:R:D69 R:R:I59 11.37134.2NoNo087
34R:R:L75 R:R:M124 61.98455.65NoNo098
35R:R:Q92 R:R:W99 11.26388.76YesYes158
36R:R:F101 R:R:F88 12.34588.57YesNo076
37R:R:D113 R:R:L89 15.63975.43YesNo066
38R:R:I109 R:R:L89 14.70235.71NoNo066
39R:R:V168 R:R:Y197 13.656.31YesYes056
40R:R:S111 R:R:V168 16.49196.46NoYes065
41R:R:S111 R:R:W169 14.157623.47NoNo065
42R:R:T114 R:R:V168 10.87119.52NoYes055
43R:R:F118 R:R:T114 11.74185.19YesNo075
44R:R:F118 R:R:Q117 15.5363.51YesYes077
45R:R:Q117 R:R:T205 17.277415.59YesNo075
46R:R:M124 R:R:N302 61.22494.21NoNo089
47R:R:N302 R:R:Y256 60.4585.81NoYes098
48R:R:R131 R:R:Y256 54.05173.09NoYes098
49R:R:L135 R:R:R131 34.28433.64NoNo089
50R:R:I220 R:R:L135 33.28764.28NoNo088
51R:R:I220 R:R:Y132 32.28353.63NoYes088
52R:R:R131 R:R:V253 23.79496.54NoNo097
53R:R:F133 R:R:Y132 10.56738.25YesYes548
54R:R:H268 R:R:Y267 20.852910.89YesYes087
55R:R:I292 R:R:Y267 18.8043.63NoYes057
56R:R:F206 R:R:H268 26.14415.84YesYes088
57R:R:F206 R:R:L210 10.20428.53YesYes687
58R:R:T250 R:R:V253 15.06541.59NoNo067
59R:R:T224 R:R:T250 12.7831.57NoNo086
60R:R:T224 R:R:V246 11.67516.35NoNo086
61R:R:W93 R:R:Y288 23.29475.79YesYes155
62L:L:R11 R:R:Q117 56.067310.51YesYes007
63R:R:M86 R:R:Y296 14.105726.34YesYes087
64R:R:F88 R:R:I109 13.73156.28NoNo066
65R:R:H268 R:R:T205 15.87689.58YesNo085
66R:R:H82 R:R:Y296 10.874816.33YesYes377
67R:R:D113 R:R:H82 11.53067.56YesYes367
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:L5 R:R:Q279 5.32 0 No No 0 1 0 1
L:L:R6 R:R:G97 4.5 1 Yes Yes 0 4 0 1
L:L:R6 R:R:F177 18.17 1 Yes No 0 1 0 1
L:L:R6 R:R:S183 6.59 1 Yes Yes 0 5 0 1
L:L:C7 R:R:P280 3.77 0 No No 0 1 0 1
L:L:M8 R:R:W93 5.82 1 Yes Yes 0 5 0 1
L:L:M8 R:R:P280 3.35 1 Yes No 0 1 0 1
L:L:M8 R:R:Y285 7.18 1 Yes No 0 4 0 1
L:L:M8 R:R:Y288 21.55 1 Yes Yes 0 5 0 1
L:L:L9 R:R:F186 3.65 2 Yes Yes 0 5 0 1
L:L:L9 R:R:V194 4.47 2 Yes No 0 1 0 1
L:L:L9 R:R:Y197 3.52 2 Yes Yes 0 6 0 1
L:L:G10 R:R:Q271 3.29 0 No No 0 5 0 1
L:L:R11 R:R:H82 7.9 3 Yes Yes 0 7 0 1
L:L:R11 R:R:D113 14.29 3 Yes Yes 0 6 0 1
L:L:R11 R:R:Q117 10.51 3 Yes Yes 0 7 0 1
L:L:R11 R:R:I292 3.76 3 Yes No 0 5 0 1
L:L:R11 R:R:S295 5.27 3 Yes No 0 7 0 1
L:L:R11 R:R:Y296 12.35 3 Yes Yes 0 7 0 1
L:L:V12 R:R:F186 5.24 0 No Yes 0 5 0 1
L:L:Y13 R:R:Q92 12.4 1 Yes Yes 0 5 0 1
L:L:Y13 R:R:W93 12.54 1 Yes Yes 0 5 0 1
L:L:Y13 R:R:G97 4.35 1 Yes Yes 0 4 0 1
L:L:Y13 R:R:S183 10.17 1 Yes Yes 0 5 0 1
L:L:Y13 R:R:Y285 8.94 1 Yes No 0 4 0 1
L:L:R14 R:R:V194 5.23 2 Yes No 0 1 0 1
L:L:P15 R:R:T189 6.99 0 No No 0 5 0 1
L:L:W17 R:R:P191 9.46 0 No No 0 1 0 1
R:R:D113 R:R:H82 7.56 3 Yes Yes 6 7 1 1
R:R:H82 R:R:N116 5.1 3 Yes No 7 8 1 2
R:R:H82 R:R:Y296 16.33 3 Yes Yes 7 7 1 1
R:R:H82 R:R:S299 4.18 3 Yes Yes 7 9 1 2
R:R:M86 R:R:Y296 26.34 0 Yes Yes 8 7 2 1
R:R:D113 R:R:L89 5.43 3 Yes No 6 6 1 2
R:R:Q92 R:R:W99 8.76 1 Yes Yes 5 8 1 2
R:R:Q92 R:R:S183 4.33 1 Yes Yes 5 5 1 1
R:R:C184 R:R:Q92 6.1 1 No Yes 9 5 2 1
R:R:W93 R:R:Y285 9.65 1 Yes No 5 4 1 1
R:R:W93 R:R:Y288 5.79 1 Yes Yes 5 5 1 1
R:R:W93 R:R:Y289 7.72 1 Yes Yes 5 3 1 2
R:R:C184 R:R:W99 14.37 1 No Yes 9 8 2 2
R:R:T110 R:R:V168 3.17 0 No Yes 5 5 2 2
R:R:F186 R:R:T110 3.89 2 Yes No 5 5 1 2
R:R:D113 R:R:Y296 5.75 3 Yes Yes 6 7 1 1
R:R:F118 R:R:Q117 3.51 0 Yes Yes 7 7 2 1
R:R:L201 R:R:Q117 5.32 0 No Yes 5 7 2 1
R:R:Q117 R:R:T205 15.59 0 Yes No 7 5 1 2
R:R:V168 R:R:Y197 6.31 0 Yes Yes 5 6 2 1
R:R:F177 R:R:I175 6.28 1 No No 1 1 1 2
R:R:F177 R:R:S183 6.61 1 No Yes 1 5 1 1
R:R:F186 R:R:L188 4.87 2 Yes No 5 6 1 2
R:R:F186 R:R:Y197 10.32 2 Yes Yes 5 6 1 1
R:R:L188 R:R:Y197 4.69 2 No Yes 6 6 2 1
R:R:L201 R:R:Y197 3.52 0 No Yes 5 6 2 1
R:R:Q271 R:R:Y267 19.16 0 No Yes 5 7 1 2
R:R:I292 R:R:Y267 3.63 0 No Yes 5 7 1 2
R:R:I270 R:R:Y288 3.63 0 No Yes 4 5 2 1
R:R:Q271 R:R:Y288 13.53 0 No Yes 5 5 1 1
R:R:F284 R:R:N274 7.25 0 Yes No 4 4 1 2
R:R:I292 R:R:Y288 8.46 0 No Yes 5 5 1 1
L:L:C16 R:R:Q279 3.05 0 No No 0 1 0 1
L:L:L9 R:R:T198 2.95 2 Yes No 0 5 0 1
R:R:F284 R:R:V273 2.62 0 Yes No 4 4 1 2
L:L:M8 R:R:F284 2.49 1 Yes Yes 0 4 0 1
L:L:W17 R:R:T189 2.43 0 No No 0 5 0 1
R:R:G96 R:R:G97 2.11 0 No Yes 4 4 2 1
R:R:G97 R:R:V181 1.84 1 Yes No 4 2 1 2
R:R:P191 R:R:S190 1.78 0 No No 1 2 1 2
R:R:L275 R:R:V194 1.49 0 No No 5 1 2 1
R:R:F284 R:R:T281 1.3 0 Yes No 4 2 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8WST_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.1
Number of Linked Nodes 286
Number of Links 315
Number of Hubs 38
Number of Links mediated by Hubs 136
Number of Communities 7
Number of Nodes involved in Communities 41
Number of Links involved in Communities 56
Path Summary
Number Of Nodes in MetaPath 68
Number Of Links MetaPath 67
Number of Shortest Paths 54802
Length Of Smallest Path 3
Average Path Length 13.8232
Length of Longest Path 31
Minimum Path Strength 1.285
Average Path Strength 6.88308
Maximum Path Strength 22.05
Minimum Path Correlation 0.7
Average Path Correlation 0.942939
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 62.5025
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 42.6145
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ969V1
Sequence
>8WST_nogp_Chain_R
VVDTVILPS MIGIICSTG LVGNILIVF TIIRSRKKT VPDIYICNL 
AVADLVHIV GMPFLIHQW ARGGEWVFG GPLCTIITS LDTCNQFAC 
SAIMTVMSV DRYFALVQP FRLTRWRTR YKTIRINLG LWAASFILA 
LPVWVYSKV IKFKDGVES CAFDLTSPD DVLWYTLYL TITTFFFPL 
PLILVCYIL ILCYTWEMY QQNKDARCC NPSVPKQRV MKLTKMVLV 
YVVVFILSA APYHVIQLV NLQMEQPTL AFYVGYYLS ICLSYASSS 
INPFLYILL SGNFQKRL


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8WSTAPeptideMelanin Concentrating HormoneMCH2Homo sapiensPro-MCH-chim(NtGi1L-Gs-CtGq)/β1/γ22.42024-06-19doi.org/10.1038/s41421-024-00679-8
8WST (No Gprot) APeptideMelanin Concentrating HormoneMCH2Homo sapiensPro-MCH-2.42024-06-19doi.org/10.1038/s41421-024-00679-8




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8WST_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.