Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 8.57710
2R:R:I32 4.65613
3R:R:H36 7.202514
4R:R:S43 5.1175465
5R:R:N50 7.2825409
6R:R:L57 5.16477
7R:R:T67 6.1375407
8R:R:Y69 6.02167608
9R:R:L73 5.14439
10R:R:D77 8.315439
11R:R:I78 3.1575407
12R:R:S99 4.4625485
13R:R:I105 4.98487
14R:R:F112 3.76504
15R:R:F114 5.574545
16R:R:T118 6.54333646
17R:R:C131 4.48754107
18R:R:L135 3.995107
19R:R:R144 5.40833608
20R:R:I188 4.70333624
21R:R:I230 4.7925408
22R:R:F237 6.795408
23R:R:F240 8.14407
24R:R:M244 15.9025415
25R:R:R245 5.7625428
26R:R:Y248 8.57414
27R:R:L249 3.5175425
28R:R:F258 5.97404
29R:R:L267 4.7325454
30R:R:N276 6.616539
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:Y91 38.78733.42YesNo104
2R:R:H36 R:R:Y91 29.68915.24YesNo144
3R:R:H36 R:R:I32 13.96813.98YesYes143
4L:L:?1 R:R:H263 42.2933.75YesNo003
5R:R:H263 R:R:H36 30.60973.58NoYes034
6R:R:H263 R:R:V35 13.50434.15NoNo035
7R:R:H36 R:R:S88 45.05525.58YesNo046
8R:R:M40 R:R:S88 42.31359.2NoNo056
9R:R:F85 R:R:M40 31.012111.2NoNo665
10L:L:?1 R:R:L87 85.57514.12YesNo005
11R:R:F112 R:R:L87 86.0663.65YesNo045
12R:R:F112 R:R:L80 99.37254.87YesNo045
13R:R:L80 R:R:S273 99.69313NoNo059
14R:R:D77 R:R:S273 10010.31YesNo099
15R:R:D77 R:R:N50 73.625710.77YesYes099
16R:R:N50 R:R:S74 64.21365.96YesNo099
17R:R:L53 R:R:S74 63.60666.01NoNo089
18R:R:I78 R:R:N50 20.53614.25YesYes079
19R:R:L53 R:R:L57 56.08386.92NoYes787
20R:R:I78 R:R:L54 11.48552.85YesNo078
21R:R:L57 R:R:T67 57.72062.95YesYes077
22R:R:N64 R:R:T67 54.965211.7NoYes087
23R:R:N64 R:R:P65 54.76064.89NoNo087
24R:R:D77 R:R:L73 40.44478.14YesYes399
25R:R:L122 R:R:L73 50.64794.15NoYes079
26R:R:L122 R:R:T118 50.28652.95NoYes076
27R:R:T118 R:R:W157 31.346320.62YesNo469
28R:R:H72 R:R:W157 42.76367.41NoNo099
29R:R:C153 R:R:H72 41.958811.79NoNo079
30R:R:C153 R:R:Y69 41.19494.03NoYes078
31R:R:D77 R:R:N276 17.48744.04YesYes399
32R:R:F85 R:R:I89 28.427211.3NoNo064
33R:R:I89 R:R:L93 25.61722.85NoNo044
34R:R:L93 R:R:S99 17.0851.5NoYes045
35R:R:M244 R:R:Y248 13.436119.16YesYes154
36R:R:S160 R:R:T118 31.69424.8NoYes486
37R:R:F112 R:R:M244 15.24354.98YesYes045
38R:R:N117 R:R:S160 40.30152.98NoNo068
39R:R:N117 R:R:V163 10.08732.96NoNo064
40R:R:N117 R:R:R245 28.51597.23NoYes068
41R:R:P65 R:R:R144 54.50148.65NoYes078
42R:R:R144 R:R:Y140 72.64363.09YesNo086
43R:R:S133 R:R:Y140 71.31365.09NoNo086
44R:R:S133 R:R:V134 69.973.23NoNo087
45R:R:L135 R:R:V134 68.61272.98YesNo077
46R:R:C131 R:R:L135 60.12826.35YesYes1077
47R:R:C131 R:R:S206 36.00465.16YesNo078
48R:R:S127 R:R:S206 34.33374.89NoNo098
49R:R:M203 R:R:S127 29.02064.6NoNo989
50R:R:F237 R:R:M203 27.513313.68YesNo088
51R:R:F237 R:R:T124 18.68092.59YesNo088
52R:R:F199 R:R:T124 11.369512.97NoNo088
53R:R:C131 R:R:L210 27.24733.17YesNo078
54R:R:L249 R:R:R245 22.45943.64YesYes258
55R:R:I188 R:R:L249 14.56832.85YesYes245
56L:L:?1 R:R:Y251 17.26913.42YesNo004
57R:R:I230 R:R:L210 25.48774.28YesNo088
58R:R:I230 R:R:V211 13.19066.14YesNo085
59R:R:V211 R:R:Y227 11.34917.57NoNo055
60R:R:N272 R:R:N276 17.855713.62NoYes099
61R:R:F240 R:R:N272 15.925510.87YesNo079
62R:R:S265 R:R:Y248 11.18543.82NoYes064
63R:R:E129 R:R:Y69 33.065115.71NoYes098
64R:R:E129 R:R:R144 32.4994.65NoYes098
65R:R:F114 R:R:W157 12.26988.02YesNo459
66R:R:F114 R:R:S160 10.49655.28YesNo458
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:L87 14.12 1 Yes No 0 5 0 1
L:L:?1 R:R:Y91 3.42 1 Yes No 0 4 0 1
L:L:?1 R:R:S109 8.75 1 Yes No 0 4 0 1
L:L:?1 R:R:Y251 3.42 1 Yes No 0 4 0 1
L:L:?1 R:R:H262 22.49 1 Yes No 0 3 0 1
L:L:?1 R:R:H263 3.75 1 Yes No 0 3 0 1
L:L:?1 R:R:L266 4.04 1 Yes No 0 4 0 1
R:R:H36 R:R:P33 7.63 1 Yes No 4 3 2 2
R:R:P33 R:R:Y91 4.17 1 No No 3 4 2 1
R:R:H263 R:R:V35 4.15 0 No No 3 5 1 2
R:R:H36 R:R:Y91 15.24 1 Yes No 4 4 2 1
R:R:H263 R:R:H36 3.58 0 No Yes 3 4 1 2
R:R:F112 R:R:L87 3.65 0 Yes No 4 5 2 1
R:R:H262 R:R:Y248 5.44 1 No Yes 3 4 1 2
R:R:L266 R:R:Y248 5.86 1 No Yes 4 4 1 2
R:R:W255 R:R:Y251 4.82 0 No No 1 4 2 1
R:R:F258 R:R:Y251 6.19 0 Yes No 4 4 2 1
R:R:H262 R:R:L266 14.14 1 No No 3 4 1 1
R:R:S109 R:R:V110 1.62 0 No No 4 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9JLC_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.95
Number of Linked Nodes 230
Number of Links 251
Number of Hubs 30
Number of Links mediated by Hubs 124
Number of Communities 11
Number of Nodes involved in Communities 51
Number of Links involved in Communities 61
Path Summary
Number Of Nodes in MetaPath 67
Number Of Links MetaPath 66
Number of Shortest Paths 31734
Length Of Smallest Path 3
Average Path Length 15.6928
Length of Longest Path 38
Minimum Path Strength 1.435
Average Path Strength 6.2939
Maximum Path Strength 23.95
Minimum Path Correlation 0.7
Average Path Correlation 0.917432
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 2.85714
Average % Of Corr. Nodes 40.9476
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 37.8087
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code_L_
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code_L_
Name
Synonyms
Identifier
Formula
Molecular Weight
SMILES
PubChem
Formal Charge
Total Atoms
Total Chiral Atoms
Total Bonds
Total Aromatic Bonds

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP04201
Sequence
>9JLC_nogp_Chain_R
QIPIVHWVI MSISPVGFV ENGILLWFL CFRMRRNPF TVYITHLSI 
ADISLLFCI FILSIDYAL DYELSSGHY YTIVTLSVT FLFGYNTGL 
YLLTAISVE RCLSVLYPI WYRCHRPKY QSALVCALL WALSCLVTT 
MEYVMCRND CRAVIIFIA ILSFLVFTP LMLVSSTIL VVKIRKNTW 
ASHSSKLYI VIMVTIIIF LIFAMPMRL LYLLYYEYW STFGNLHHI 
SLLFSTINS SANPFIYFF V


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9JLCAOrphanOrphanMAS1Homo sapiensAVE 0991-Gi1/β1/γ22.982025-09-24To be published
9JLC (No Gprot) AOrphanOrphanMAS1Homo sapiensAVE 0991-2.982025-09-24To be published




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9JLC_nogp.zip



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