CodeFUC
Namealpha-L-fucose
Synonymsalpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose
Identifier
FormulaC6 H12 O5
Molecular Weight164.156
SMILES
PubChem439554
Formal Charge0
Total Atoms23
Total Chiral Atoms5
Total Bonds23
Total Aromatic Bonds0
Networks2
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This ligand is also present in the following 2 networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6FJ3 B1 Peptide Parathyroid Hormone PTH1 Homo Sapiens PTH - - 2.5 2018-11-21 doi.org/10.1038/s41594-018-0151-4

A 2D representation of the interactions of FUC in 6FJ3
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:E111 R:R:R146 12.79 2 Yes Yes 7 8 2 2
R:R:E111 R:R:T163 4.23 2 Yes Yes 7 5 2 1
L:L:Y34 R:R:E111 12.35 2 Yes Yes 0 7 1 2
R:R:D113 R:R:R146 3.57 2 Yes Yes 9 8 2 2
L:L:Y34 R:R:D113 3.45 2 Yes Yes 0 9 1 2
L:L:Y34 R:R:H114 5.44 2 Yes No 0 4 1 2
R:R:R146 R:R:T163 9.06 2 Yes Yes 8 5 2 1
H:H:?2 R:R:N161 29.47 2 No No 0 7 1 1
H:H:?5 R:R:N161 7.39 2 Yes No 0 7 0 1
L:L:Y34 R:R:T163 4.99 2 Yes Yes 0 5 1 1
H:H:?5 R:R:T163 9.52 2 Yes Yes 0 5 0 1
H:H:?5 L:L:Y34 17.67 2 Yes Yes 0 0 0 1
H:H:?2 H:H:?3 43.17 2 No No 0 0 1 1
H:H:?2 H:H:?5 27.98 2 No Yes 0 0 1 0
H:H:?3 H:H:?4 33.39 2 No No 0 0 1 2
H:H:?3 H:H:?5 5.33 2 No Yes 0 0 1 0
R:R:L156 R:R:N161 2.75 0 No No 4 7 2 1
StatisticsValue
Average Number Of Links5.00
Average Number Of Links With An Hub2.00
Average Interaction Strength13.58
Average Nodes In Shell12.00
Average Hubs In Shell6.00
Average Links In Shell17.00
Average Links Mediated by Hubs In Shell13.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)

A 2D representation of the interactions of FUC in 6FJ3
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:E169 R:R:G142 4.91 3 Yes No 5 5 1 2
R:R:H143 R:R:Y145 4.36 0 No Yes 3 4 2 1
R:R:N166 R:R:Y145 4.65 3 Yes Yes 7 4 2 1
R:R:E169 R:R:Y145 8.98 3 Yes Yes 5 4 1 1
H:H:?6 R:R:Y145 10.48 3 Yes Yes 0 4 1 1
H:H:?9 R:R:Y145 22.72 3 Yes Yes 0 4 0 1
R:R:N166 R:R:S168 5.96 3 Yes No 7 6 2 2
H:H:?6 R:R:N166 28.24 3 Yes Yes 0 7 1 2
H:H:?6 R:R:S168 9.4 3 Yes No 0 6 1 2
H:H:?6 R:R:E169 4.74 3 Yes Yes 0 5 1 1
H:H:?9 R:R:E169 5.71 3 Yes Yes 0 5 0 1
H:H:?6 H:H:?7 29.89 3 Yes No 0 0 1 1
H:H:?6 H:H:?9 22.65 3 Yes Yes 0 0 1 0
H:H:?7 H:H:?8 30.82 3 No No 0 0 1 2
H:H:?7 H:H:?9 9.33 3 No Yes 0 0 1 0
StatisticsValue
Average Number Of Links4.00
Average Number Of Links With An Hub3.00
Average Interaction Strength15.10
Average Nodes In Shell10.00
Average Hubs In Shell5.00
Average Links In Shell15.00
Average Links Mediated by Hubs In Shell14.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6VJM C Aminoacid GABAB GABAB1; GABAB2 Homo Sapiens - - - 3.97 2020-06-10 doi.org/10.1038/s41586-020-2408-4

A 2D representation of the interactions of FUC in 6VJM
colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

(Click to enlarge 🔍)
Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
H:H:?1 H:H:?2 46.49 6 Yes No 0 0 1 1
H:H:?1 H:H:?3 34.65 6 Yes No 0 0 1 0
H:H:?1 R:R:R436 13.04 6 Yes Yes 0 1 1 2
H:H:?1 R:R:N440 35.61 6 Yes No 0 7 1 2
H:H:?2 H:H:?3 10.66 6 No No 0 0 1 0
H:H:?2 R:R:R436 2.17 6 No Yes 0 1 1 2
R:R:N440 R:R:R436 7.23 6 No Yes 7 1 2 2
StatisticsValue
Average Number Of Links2.00
Average Number Of Links With An Hub1.00
Average Interaction Strength22.66
Average Nodes In Shell5.00
Average Hubs In Shell2.00
Average Links In Shell7.00
Average Links Mediated by Hubs In Shell6.00
Physico-chemical properties of the nodes interacting with this ligand (click to enlarge 🔍)
Location of the nodes interacting with this ligand (click to enlarge 🔍)
StatisticsValue
Average Number Of Links3.67
Average Number Of Links With An Hub2.00
Average Interaction Strength17.11
Average Nodes In Shell9.00
Average Hubs In Shell4.33
Average Links In Shell13.00
Average Links Mediated by Hubs In Shell11.00

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Physico-chemical properties of the nodes interacting with this ligand

(Click to enlarge 🔍)

missing image


Location of the nodes interacting with this ligand

(Click to enlarge 🔍)