Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y171 5.4725405
2R:R:L175 4.2075466
3R:R:F176 5.46767
4R:R:P177 2.0375467
5R:R:G184 2.9525405
6R:R:C188 2.6475465
7R:R:Q189 10.0275464
8R:R:M194 6.635467
9R:R:Y209 6.3085278
10R:R:E210 6.4425405
11R:R:L213 3.1975466
12R:R:K219 6.724285
13R:R:T226 5.1175427
14R:R:Y230 6.848527
15R:R:L233 6.3475427
16R:R:Y234 7.09667625
17R:R:I241 3.506527
18R:R:P244 2.82508
19R:R:V249 2.835408
20R:R:W260 6.52714727
21R:R:I263 2.805426
22R:R:S266 3.444548
23R:R:Y267 5.2625467
24R:R:S269 5.254548
25R:R:P272 4.0225417
26R:R:L274 6.39648
27R:R:F280 10.0425448
28R:R:F283 5.25333648
29R:R:F284 5.35667626
30R:R:R285 6.828549
31R:R:H287 5.752527
32R:R:P288 3.542526
33R:R:N294 6.036519
34R:R:T296 5.0675418
35R:R:R297 6.236517
36R:R:L300 3.39416
37R:R:W304 10.9083617
38R:R:W306 8.194519
39R:R:I312 3.38754306
40R:R:Q313 5.3875407
41R:R:Q314 6.97438
42R:R:F319 7.18833637
43R:R:L323 4.832516
44R:R:D325 6.768516
45R:R:I337 6.0475406
46R:R:F339 11.5845196
47R:R:P347 3.6875406
48R:R:R360 6.202519
49R:R:I361 5.464519
50R:R:F366 4.084538
51R:R:E370 7.0275435
52R:R:R372 13.645437
53R:R:F375 5.736538
54R:R:Y379 10.1725407
55R:R:V389 4.8418
56R:R:W390 8.155439
57R:R:F391 4.42714717
58R:R:Y396 5.51833635
59R:R:W400 6.55143738
60R:R:C410 3.7725409
61R:R:V419 3.7975435
62R:R:H422 5.4275436
63R:R:T424 4.3725436
64R:R:R436 6.394561
65R:R:M441 6.015465
66R:R:S443 5.14434
67R:R:F446 6.6275467
68R:R:L450 4.26467
69R:R:P458 5.72403
70R:R:T461 4.764223
71R:R:G462 2.3554223
72R:R:F464 6.23407
73R:R:E466 5.7425
74R:R:L469 2.745426
75R:R:Y471 6.39714769
76R:R:W475 7.77568
77R:R:F498 3.79167628
78R:R:Y500 6.594528
79R:R:T506 2.815425
80R:R:I509 1.47426
81R:R:M513 4.9526
82R:R:F518 5.7425409
83R:R:F527 3.5925429
84R:R:D528 4.40254296
85R:R:R533 4.986529
86R:R:W536 5.285433
87R:R:Q541 6.0125419
88R:R:L542 4.6225434
89R:R:Q543 5.6025418
90R:R:Y547 4.108535
91R:R:I550 4.115417
92R:R:Y552 5.5425434
93R:R:Y553 7.715416
94R:R:D554 7.295435
95R:R:W562 6.02143715
96R:R:W568 6.774519
97R:R:P573 6415
98R:R:P574 3.982519
99R:R:F586 8.6925234
100R:R:F592 5.6454235
101R:R:R620 5.284578
102R:R:I622 3.852579
103R:R:Q626 5.65167679
104R:R:P627 3.764579
105R:R:N630 4.964579
106R:R:N631 6.505408
107R:R:L649 12.42254235
108R:R:F659 9.0945154
109R:R:P660 4.3254153
110R:R:R666 8.175328
111R:R:W668 5.194336
112R:R:L670 2.12254328
113R:R:Y678 5.875408
114R:R:F682 3.995479
115R:R:K684 3.57479
116R:R:I685 2.735479
117R:R:W686 5.9475478
118R:R:W687 7.01479
119R:R:H689 6.8678
120R:R:Y711 10.044245
121R:R:V718 2.6475407
122R:R:W728 14.29254259
123R:R:D732 5.0865258
124R:R:R736 8.4154155
125R:R:K747 4.19513
126R:R:S753 4.36412
127R:R:I754 4.004505
128R:R:M766 2.444255
129R:R:Y774 2.774506
130R:R:K777 4.895409
131R:R:L781 4.312508
132R:R:L783 3.25477
133R:R:L787 4.05479
134R:R:E790 8.044578
135R:R:T791 4.62479
136R:R:K798 5.446577
137R:R:D801 3.4725479
138R:R:Y810 9.29409
139R:R:I847 2.3854344
140R:R:F853 4.498579
141S:S:L56 5.0254356
142S:S:M59 7.3625427
143S:S:M62 3.558548
144S:S:P63 3.488548
145S:S:K70 3.975443
146S:S:P79 4.37405
147S:S:L83 3.47754127
148S:S:Y97 7.224358
149S:S:R102 7.35422
150S:S:Y104 4.754526
151S:S:E107 6.7425445
152S:S:N110 4.9925445
153S:S:Y118 6.54143727
154S:S:I121 6.3625426
155S:S:P125 6.06427
156S:S:H127 6.75833628
157S:S:M129 3.655406
158S:S:F131 4.51447
159S:S:G132 2.606549
160S:S:V134 3.25446
161S:S:C135 4.335446
162S:S:V138 3.1975448
163S:S:W149 5.42833627
164S:S:L154 2.9925447
165S:S:F156 5.76446
166S:S:T160 3.7154138
167S:S:L163 4.5385138
168S:S:Y169 7.46254137
169S:S:Y171 4.34646
170S:S:F172 4.8185138
171S:S:F173 4.11167647
172S:S:R174 4.1925139
173S:S:P177 3.598336106
174S:S:N183 4.028509
175S:S:L189 3.24754166
176S:S:W195 7.365699
177S:S:V198 3.485498
178S:S:Q203 7.9675457
179S:S:R207 5.7875455
180S:S:F208 6.24457
181S:S:R212 6.166375
182S:S:S227 5.5454144
183S:S:F232 5.98457
184S:S:P236 5.70333655
185S:S:C237 4.3453
186S:S:N246 6.39754146
187S:S:V248 4.734147
188S:S:R249 7.28499
189S:S:I250 6.302599
190S:S:Q254 5.87406
191S:S:F255 4.146558
192S:S:M259 6.05454
193S:S:F264 5.595457
194S:S:C265 4.09754209
195S:S:Y268 6.925406
196S:S:Y273 7.725405
197S:S:K276 12.4225497
198S:S:W279 9.915409
199S:S:I281 4.70333656
200S:S:W284 3.868556
201S:S:Y285 5.44286755
202S:S:W289 5.12778959
203S:S:W290 9.3025456
204S:S:C302 5.64209
205S:S:N306 4.5765206
206S:S:M311 4.7525455
207S:S:Y314 5.68667655
208S:S:F319 5.76754104
209S:S:K325 4.1275403
210S:S:S331 3.9145128
211S:S:Y338 4.775127
212S:S:Y342 18.3654267
213S:S:N343 7.8854263
214S:S:R346 8.2265264
215S:S:V349 3.1475401
216S:S:P351 3.95254263
217S:S:F354 4.2145105
218S:S:Y357 5.6125105
219S:S:Y359 5.971437129
220S:S:D360 3.336509
221S:S:W363 9.01254128
222S:S:F388 3.034367
223S:S:Y390 5.41428
224S:S:M403 5.908545
225S:S:F408 4.4825409
226S:S:F409 2.78402
227S:S:R422 5.341676109
228S:S:M423 5.1975405
229S:S:F428 3.355168
230S:S:F431 4.455655
231S:S:E436 7.5975454
232S:S:G440 2.002507
233S:S:Y442 3.9325166
234S:S:L449 4.29754167
235S:S:K465 4.215494
236S:S:D466 7.245499
237S:S:R475 7.9975484
238S:S:Y482 5.165405
239S:S:M514 5.355117
240S:S:N520 6.79754119
241S:S:L522 3.864185
242S:S:G526 2.3045189
243S:S:Y531 7.108508
244S:S:F549 14.544424
245S:S:R556 5.894427
246S:S:W558 6.145406
247S:S:T566 3.32254187
248S:S:K574 6.395119
249S:S:R577 3.8685459
250S:S:H579 5.9675478
251S:S:K583 4.61333677
252S:S:K593 5.9065456
253S:S:W615 15.174589
254S:S:D619 6.29489
255S:S:L621 2.9275486
256S:S:E631 7.2854175
257S:S:R642 10.5845174
258S:S:L645 5.3575485
259S:S:H647 8.9775485
260S:S:N650 5.64488
261S:S:M653 4.665685
262S:S:W656 10.7767688
263S:S:Y663 5.95485
264S:S:M668 3.7345218
265S:S:F670 4.8625407
266S:S:F673 4.0525479
267S:S:L674 3.3625409
268S:S:I683 5.726507
269S:S:D688 5.34119
270S:S:S689 3.8554119
271S:S:V699 2.122509
272S:S:R714 5.45483
273S:S:F721 4.2125407
274S:S:L736 3.3925407
275S:S:F740 6.656119
276H:H:?1 32.3025460
277H:H:?4 21.665400
278H:H:?8 17.71400
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F498 R:R:I240 11.45026.28YesNo285
2R:R:Y230 S:S:W149 11.28866.75YesYes277
3R:R:E255 R:R:F280 1007NoYes488
4R:R:E255 S:S:N110 1005.26NoYes485
5R:R:R285 R:R:S266 10.5912.64YesYes498
6R:R:L274 R:R:S271 1009.01YesNo089
7R:R:P272 R:R:S271 1003.56YesNo079
8R:R:P272 R:R:T322 1001.75YesNo177
9R:R:R285 R:R:S289 1006.59YesNo098
10R:R:S289 R:R:T291 1003.2NoNo086
11R:R:N294 R:R:T291 1002.92YesNo196
12R:R:N294 R:R:R297 1002.41YesYes197
13R:R:F391 R:R:R297 1002.14YesYes177
14R:R:F391 R:R:I361 1002.51YesYes179
15R:R:I361 R:R:R360 1002.51YesYes199
16R:R:F366 R:R:G364 11.62324.52YesNo086
17R:R:G364 R:R:V363 14.68391.84NoNo067
18R:R:Q577 R:R:R360 10014.02NoYes159
19R:R:Q577 R:R:S753 1001.44NoYes152
20R:R:L579 R:R:S753 1004.5NoYes032
21R:R:I581 R:R:L579 1002.85NoNo023
22R:R:I581 R:R:Q757 1004.12NoNo025
23R:R:I738 R:R:Q757 1008.23NoNo045
24R:R:I738 R:R:R736 1007.52NoYes1545
25R:R:C761 R:R:F659 12.06678.38NoYes1594
26R:R:C663 R:R:C761 17.97337.28NoNo099
27R:R:C663 R:R:R666 17.83494.18NoYes098
28R:R:P660 R:R:R736 1004.32YesYes1535
29R:R:L670 R:R:R666 13.13182.43YesYes3288
30R:R:A643 R:R:L670 12.86241.58NoYes088
31R:R:A643 R:R:L669 12.72411.58NoNo085
32R:R:L669 R:R:W668 12.58593.42NoYes056
33R:R:L672 R:R:W668 10.02487.97NoYes056
34R:R:L734 R:R:P660 1008.21NoYes063
35R:R:L734 R:R:P733 1008.21NoNo069
36R:R:D732 R:R:P733 1001.61YesNo089
37R:R:D732 R:R:W728 96.26811.17YesYes2589
38R:R:M766 R:R:W728 96.12452.33YesYes2559
39R:R:L770 R:R:M766 1002.83NoYes055
40R:R:L770 R:R:M824 1002.83NoNo055
41R:R:M824 R:R:Y774 1002.39NoYes056
42R:R:K777 R:R:Y774 1004.78YesYes096
43R:R:F674 R:R:K777 1003.72NoYes099
44R:R:F674 R:R:Y678 1006.19NoYes098
45R:R:D732 R:R:S763 96.12215.89YesNo2588
46R:R:M766 R:R:S763 96.08623.07YesNo2558
47R:R:F682 R:R:Y678 1003.09YesYes098
48R:R:F682 R:R:W686 92.32785.01YesYes798
49R:R:F682 R:R:L783 94.84514.87YesYes797
50R:R:L787 R:R:W686 92.24764.56YesYes798
51R:R:L783 R:R:L787 91.85132.77YesYes779
52R:R:H689 R:R:L787 1006.43YesYes789
53R:R:H689 S:S:K583 1002.62YesYes787
54S:S:K70 S:S:P63 65.42193.35YesYes438
55S:S:M62 S:S:P63 1005.03YesYes488
56S:S:K70 S:S:V134 69.53893.04YesYes436
57S:S:M62 S:S:V134 65.19863.04YesYes486
58S:S:G132 S:S:M62 98.31.75YesYes498
59S:S:F156 S:S:M62 96.00156.22YesYes468
60S:S:N110 S:S:V138 1004.43YesYes458
61S:S:C108 S:S:V138 65.35513.42NoYes478
62S:S:C108 S:S:T106 65.29991.69NoNo078
63S:S:P63 S:S:T106 65.24543.5YesNo088
64S:S:C135 S:S:V138 1001.71YesYes468
65S:S:C135 S:S:K70 1006.47YesYes463
66S:S:F131 S:S:G132 95.50044.52YesYes479
67S:S:F131 S:S:I362 13.0242.51YesNo076
68S:S:F131 S:S:F156 95.09648.57YesYes476
69S:S:A84 S:S:I362 12.29334.87NoNo096
70S:S:A84 S:S:Y359 11.93684NoYes099
71S:S:F173 S:S:L154 1002.44YesYes477
72S:S:F131 S:S:L154 1002.44YesYes477
73S:S:F173 S:S:G420 1004.52YesNo078
74S:S:E421 S:S:G420 1001.64NoNo078
75S:S:E421 S:S:M423 1002.71NoYes075
76S:S:A444 S:S:M423 1004.83NoYes045
77S:S:A444 S:S:Y442 1004NoYes046
78S:S:I426 S:S:Y442 68.27712.42NoYes1656
79S:S:F428 S:S:I426 67.92382.51YesNo1685
80S:S:F428 S:S:V317 1003.93YesNo086
81S:S:V182 S:S:V317 30.07563.21NoNo056
82S:S:N183 S:S:V182 29.35972.96YesNo095
83S:S:L449 S:S:Y442 94.72962.34YesYes1676
84S:S:F428 S:S:L449 67.92463.65YesYes1687
85S:S:N183 S:S:V211 10.754.43YesNo096
86S:S:L215 S:S:N183 12.89632.75NoYes089
87S:S:L189 S:S:L449 26.09624.15YesYes1667
88S:S:L189 S:S:Y193 19.34482.34YesNo068
89S:S:W195 S:S:Y193 18.62757.72YesNo098
90S:S:G316 S:S:V317 96.64741.84NoNo056
91S:S:G316 S:S:T429 77.31921.82NoNo055
92S:S:E436 S:S:T429 76.60411.29YesNo045
93S:S:E436 S:S:Y314 30.065914.59YesYes545
94S:S:I281 S:S:Y314 15.76198.46YesYes565
95S:S:Q254 S:S:V211 10.03474.3YesNo066
96S:S:Q203 S:S:V205 10.74035.73YesNo574
97S:S:G283 S:S:G316 18.61352.11NoNo065
98S:S:D318 S:S:G283 17.89795.03NoNo066
99S:S:D318 S:S:W284 17.18314.47NoYes066
100S:S:F255 S:S:Y285 12.8885.16YesYes585
101S:S:F255 S:S:Q203 17.90123.51YesYes587
102S:S:E436 S:S:W289 25.05662.18YesYes549
103S:S:D256 S:S:Q203 11.455311.75NoYes577
104S:S:M259 S:S:Q203 11.456310.88YesYes547
105S:S:F264 S:S:W279 15.75649.02YesYes079
106S:S:V263 S:S:W279 19.33842.45NoYes079
107S:S:P236 S:S:V263 17.18973.53YesNo057
108S:S:E436 S:S:F431 20.76662.33YesYes545
109S:S:F431 S:S:L308 15.04742.44YesNo551
110S:S:L308 S:S:R304 14.3382.43NoNo011
111S:S:F582 S:S:K583 1003.72NoYes077
112S:S:F582 S:S:V681 10018.35NoNo078
113S:S:I683 S:S:V681 1004.61YesNo078
114S:S:I683 S:S:V578 1009.22YesNo079
115S:S:S689 S:S:V578 1003.23YesNo099
116S:S:D688 S:S:S689 1002.94YesYes1199
117S:S:D688 S:S:M514 1004.16YesYes1197
118S:S:M514 S:S:N503 56.23954.21YesNo1179
119S:S:F740 S:S:N503 56.04526.04YesNo1199
120S:S:F499 S:S:F740 1007.5NoYes079
121S:S:F499 S:S:M495 1003.73NoNo074
122S:S:G492 S:S:M495 1001.75NoNo4084
123S:S:G492 S:S:Y531 1004.35NoYes088
124S:S:S732 S:S:Y531 10016.53NoYes088
125S:S:G527 S:S:S732 1001.86NoNo058
126S:S:G526 S:S:G527 1002.11YesNo095
127S:S:G526 S:S:G563 1002.11YesNo1899
128S:S:G563 S:S:L529 1001.71NoNo095
129S:S:I559 S:S:L529 1002.85NoNo045
130S:S:I559 S:S:W558 10014.09NoYes046
131S:S:V555 S:S:W558 1002.45NoYes066
132S:S:L552 S:S:V555 1005.96NoNo046
133S:S:F549 S:S:L552 10017.05YesNo044
134S:S:F549 S:S:R556 1005.34YesYes4247
135S:S:F537 S:S:R556 1007.48NoYes057
136S:S:F537 S:S:F721 1006.43NoYes057
137S:S:F721 S:S:Q720 97.12762.34YesNo075
138S:S:Q720 S:S:R714 89.48833.5NoYes053
139S:S:L645 S:S:R714 49.45572.43YesYes853
140S:S:L645 S:S:R475 46.51197.29YesYes854
141S:S:R475 S:S:Y628 22.962510.29YesNo044
142S:S:M630 S:S:Y628 44.75252.39NoNo014
143S:S:M630 S:S:P632 65.36026.71NoNo012
144S:S:I641 S:S:P632 63.59396.77NoNo052
145S:S:M514 S:S:N520 65.05757.01YesYes1179
146S:S:F740 S:S:N520 56.04673.62YesYes1199
147S:S:K743 S:S:M514 57.21935.76NoYes097
148S:S:F740 S:S:K743 56.05388.69YesNo099
149S:S:H647 S:S:R714 24.138513.54YesYes853
150S:S:E626 S:S:H647 23.55632.46NoYes045
151S:S:E626 S:S:Y628 22.96768.98NoNo044
152S:S:P643 S:S:R475 22.96284.32NoYes044
153S:S:M630 S:S:P643 22.37396.71NoNo014
154S:S:I641 S:S:P634 54.76233.39NoNo051
155S:S:D633 S:S:P634 49.46323.22NoNo031
156S:S:D633 S:S:S640 47.69692.94NoNo033
157S:S:E631 S:S:S640 24.73185.75YesNo1753
158S:S:I470 S:S:S640 21.19874.64NoNo1733
159S:S:I470 S:S:R642 19.43227.52NoYes1734
160S:S:E631 S:S:R642 19.43229.3YesYes1754
161S:S:E472 S:S:R642 31.798318.61NoYes014
162S:S:E472 S:S:L644 28.26522.65NoNo014
163S:S:L474 S:S:L644 21.1994.15NoNo034
164S:S:E646 S:S:L474 14.13273.98NoNo063
165S:S:F721 S:S:Y482 11.19952.06YesYes075
166S:S:F740 S:S:L736 25.93334.87YesYes097
167S:S:L736 S:S:T735 25.91794.42YesNo078
168S:S:T735 S:S:V699 25.13271.59NoYes089
169S:S:E649 S:S:R714 15.30842.33NoYes843
170S:S:E649 S:S:M653 14.7276.77NoYes845
171R:R:L274 R:R:R285 1006.07YesYes489
172R:R:N294 R:R:T322 1004.39YesNo197
173R:R:F280 R:R:L274 1007.31YesYes488
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 6VJM
Class C
SubFamily Aminoacid
Type GABAB
SubType GABAB1; GABAB2
Species Homo sapiens
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 3.97
Date 2020-06-10
D.O.I. 10.1038/s41586-020-2408-4
Net Summary
Imin 1.64
Number of Linked Nodes 1318
Number of Links 1661
Number of Hubs 278
Number of Links mediated by Hubs 996
Number of Communities 45
Number of Nodes involved in Communities 446
Number of Links involved in Communities 649
Path Summary
Number Of Nodes in MetaPath 174
Number Of Links MetaPath 173
Number of Shortest Paths 41489486
Length Of Smallest Path 3
Average Path Length 128
Length of Longest Path 111
Minimum Path Strength 1.185
Average Path Strength 8.00256
Maximum Path Strength 40.885
Minimum Path Correlation 0.73
Average Path Correlation 1
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 2.5
Average % Of Corr. Nodes 65.4409
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 68.0569
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNAG
PDB ResiduesH:H:?1 H:H:?2 H:H:?4 H:H:?5 H:H:?6 H:H:?7 H:H:?8 H:H:?9 H:H:?10 H:H:?11
Environment DetailsOpen EMBL-EBI Page
CodeNAG
NameN-Acetylglucosamine
SynonymsN-Acetyl-D-glucosamine
IdentifierN-[(2R,3R,4R,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]ethanamide
FormulaC8 H15 N O6
Molecular Weight221.208
SMILESCC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
PubChem24139
Formal Charge0
Total Atoms30
Total Chiral Atoms5
Total Bonds30
Total Aromatic Bonds0

CodeFUC
PDB ResiduesH:H:?3
Environment DetailsOpen EMBL-EBI Page
CodeFUC
Namealpha-L-fucose
Synonymsalpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose
Identifier(2R,3S,4R,5S,6S)-6-methyloxane-2,3,4,5-tetrol
FormulaC6 H12 O5
Molecular Weight164.156
SMILESC[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O)O)O)O
PubChem439554
Formal Charge0
Total Atoms23
Total Chiral Atoms5
Total Bonds23
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9UBS5
Sequence
>6VJM_Chain_R
SERRAVYIG ALFPMSGGW PGGQACQPA VEMALEDVN SRRDILPDY 
ELKLIHHDS KCDPGQATK YLYELLYND PIKIILMPG CSSVSTLVA 
EAARMWNLI VLSYGSSSP ALSNRQRFP TFFRTHPSA TLHNPTRVK 
LFEKWGWKK IATIQQTTE VFTSTLDDL EERVKEAGI EITFRQSFF 
SDPAVPVKN LKRQDARII VGLFYETEA RKVFCEVYK ERLFGKKYV 
WFLIGWYAD NWFKIYDPS INCTVDEMT EAVEGHITT EIVMLNPAN 
TRSISNMTS QEFVEKLTK RLKRHPEET GGFQEAPLA YDAIWALAL 
ALNKTSRLE DFNYNNQTI TDQIYRAMN SSSFEGVSG HVVFDASGS 
RMAWTLIEQ LQGGSYKKI GYYDSTKDD LSWSKTDKW IGGSPPADQ 
TLVIKTFRF LSQKLFISV SVLSSLGIV LAVVCLSFN IYNSHVRYI 
QNSQPNLNN LTAVGCSLA LAAVFPLGL DGYHIGRNQ FPFVCQARL 
WLLGLGFSL GYGSMFTKI WWVHTVFTK KRKTLEPWK LYATVGLLV 
GMDVLTLAI WQIVDPLHR TIETFAKEE PKEDIDVSI LPQLEHCSS 
RKMNTWLGI FYGYKGLLL LLGIFLAYE TKSVSTEKI NDHRAVGMA 
IYNVAVLCL ITAPVTMIL SSQQDAAFA FASLAIVFS SYITLVVLF 
VPKMRRLIT


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

ChainS
ProteinReceptor
UniProtO75899
Sequence
>6VJM_Chain_S
SPPLSIMGL MPLTKEVAK GSIGRGVLP AVELAIEQI RNESLLRPY 
FLDLRLYDT ECDNAKGLK AFYDAIKYG PNHLMVFGG VCPSVTSII 
AESLQGWNL VQLSFAATT PVLADKKKY PYFFRTVPS DNAVNPAIL 
KLLKHYQWK RVGTLTQDV QRFSEVRND LTGVLYGED IEISDTESF 
SNDPCTSVK KLKGNDVRI ILGQFDQNM AAKVFCCAY EENMYGSKY 
QWIIPGWYE PSWWEQSRC LRKNLLAAM EGYIGVDFE PLSSKQIKT 
ISGKTPQQY EREYNNKRS GVGPSKFHG YAYDGIWVI AKTLQRAME 
TLHASIQDF NYTDHTLGR IILNAMNET NFFGVTGQV VFRNGERMG 
TIKFTQFQD SREVKVGEY NAVADTLEI INDTIRFQG SEPPKDKTI 
ILEQLRKIS LPLYSILSA LTILGMIMA SAFLFFNIK NRNQKLIKM 
SSPYMNNLI ILGGMLSYA SIFLFGLDG SFVSEKTFE TLCTVRTWI 
LTVGYTTAF GAMFAKTWR VHAIFKNVK MKKKIIKDQ KLLVIVGGM 
LLIDLCILI CWQAVDPLR RTVEKYSME PDPAGRDIS IRPLLEHCE 
NTHMTIWLG IVYAYKGLL MLFGCFLAW ETRNVSIPA LNDSKYIGM 
SVYNVGIMC IIGAAVSFL TRDQPNVQF CIVALVIIF CSTITLCLV 
FVPKLITLR T


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
6W2YCAminoacidGABABGABAB1; GABAB1Homo sapiensPubChem 5311042PubChem 23727970-3.22020-07-0110.1038/s41586-020-2469-4
6UO8CAminoacidGABABGABAB1, GABAB2Homo sapiensSKF97541GS39783-3.632020-06-1010.1038/s41586-020-2408-4
6UO9CAminoacidGABABGABAB1, GABAB2Homo sapiensSKF97541--4.82020-06-1010.1038/s41586-020-2408-4
6UOACAminoacidGABABGABAB1, GABAB2Homo sapiens---6.32020-06-1010.1038/s41586-020-2408-4
6W2XCAminoacidGABABGABAB1, GABAB2Homo sapiensPubChem 5311042PubChem 23727970-3.62020-07-0110.1038/s41586-020-2469-4
6WIVCAminoacidGABABGABAB1, GABAB2Homo sapiens-PubChem 52923113; PubChem 52924645-3.32020-07-0110.1038/s41586-020-2452-0
7C7QCAminoacidGABABGABAB1, GABAB2Homo sapiensBaclofenPubChem 7023848-32020-07-0110.1038/s41422-020-0350-5
7C7SCAminoacidGABABGABAB1, GABAB2Homo sapiensCGP54626--2.92020-07-0110.1038/s41422-020-0350-5
7CA3CAminoacidGABABGABAB1, GABAB2Homo sapiens-rac-BHFF-4.52020-11-1110.1016/j.jmb.2020.09.023
7CA5CAminoacidGABABGABAB1, GABAB2Homo sapiens---7.62020-11-1110.1016/j.jmb.2020.09.023
7CUMCAminoacidGABABGABAB1, GABAB2Homo sapiensCGP54626Phospholipid-3.522020-11-1110.1016/j.jmb.2020.09.023
7EB2CAminoacidGABABGABAB1, GABAB2Homo sapiensBaclofenrac-BHFFGi1/&β;1/&γ;23.52021-05-0510.1038/s41586-021-03507-1




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Download 6VJM.zip



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