Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:D3 5.476520
2L:L:F6 5.514520
3L:L:R12 8.7475410
4L:L:Y13 9.9825400
5L:L:R14 7.99570
6R:R:Q32 8.6075484
7R:R:C52 7.3325449
8R:R:N58 8.514546
9R:R:W62 7.814549
10R:R:F79 8.87465
11R:R:Y83 9.255464
12R:R:K91 9.39448
13R:R:C93 3.705449
14R:R:W98 7.6425448
15R:R:D116 6.95553
16R:R:Y123 7.554505
17R:R:Y130 7.984527
18R:R:Y134 7.14833627
19R:R:L141 4.948599
20R:R:F151 6.262507
21R:R:L154 4.7875408
22R:R:N159 5.485438
23R:R:H162 6.1525439
24R:R:F169 8.99333698
25R:R:I170 3.28407
26R:R:R172 7.142528
27R:R:K179 6.56406
28R:R:Y184 9.75573
29R:R:Q195 5.585403
30R:R:W199 7.4725404
31R:R:Y211 6.0425408
32R:R:I213 7.645425
33R:R:N216 9.5325408
34R:R:F217 9.5975428
35R:R:F218 7.155406
36R:R:W219 11.9665109
37R:R:E223 9.165439
38R:R:Y226 8.95407
39R:R:Y244 6.29407
40R:R:W249 9.63754109
41R:R:P252 4.6525409
42R:R:W259 9.072518
43R:R:R263 15.815417
44R:R:E267 7.9415
45R:R:W272 12.552518
46R:R:D273 7.045406
47R:R:T274 5.2675415
48R:R:H277 7.34415
49R:R:P280 5.1125414
50R:R:I292 3.6427
51R:R:F299 6.096538
52R:R:L326 3.16408
53R:R:L336 10.0825439
54R:R:F337 5.72333638
55R:R:Y341 10.0375428
56R:R:F344 5.96627
57R:R:Q356 8.735427
58R:R:E360 7.875427
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:H1 R:R:I213 28.132811.93NoYes005
2R:R:I213 R:R:R172 30.06618.77YesYes258
3R:R:F217 R:R:R172 22.79155.34YesYes288
4R:R:F217 R:R:Y341 13.373515.47YesYes288
5R:R:E360 R:R:Y341 15.41597.86YesYes278
6R:R:R172 R:R:Y134 46.1957.2YesYes287
7L:L:D3 R:R:L361 48.15055.43YesNo207
8L:L:F6 R:R:L361 47.57084.87YesNo207
9L:L:F6 R:R:Y123 87.68514.13YesYes005
10R:R:Y130 R:R:Y134 45.23756.95YesYes277
11R:R:I213 R:R:L209 13.14924.28YesNo056
12R:R:K179 R:R:L209 12.07855.64YesNo066
13L:L:T7 R:R:K179 10.692712.01NoYes006
14L:L:T7 R:R:Y184 10.53114.99NoYes003
15L:L:H1 R:R:Q210 26.97728.65NoNo007
16R:R:Q210 R:R:W259 23.04410.95NoYes178
17L:L:Y10 R:R:Y123 22.005610.92NoYes005
18L:L:Y10 R:R:Y184 10.876518.86NoYes703
19R:R:D273 R:R:T274 10.83415.78YesYes065
20L:L:Y13 R:R:Y123 87.29729.93YesYes005
21L:L:M17 L:L:Y13 83.236715.57NoYes000
22L:L:M17 R:R:D116 76.4494.16NoYes503
23L:L:Q16 R:R:D116 69.47335.22NoYes503
24L:L:Q16 R:R:F82 68.87744.68NoNo005
25L:L:V19 R:R:F82 67.115810.49NoNo005
26L:L:V19 R:R:F79 66.2295.24NoYes005
27R:R:F79 R:R:V78 61.734113.11YesNo055
28R:R:E35 R:R:V78 58.97469.98NoNo055
29R:R:E35 R:R:Q32 58.06753.82NoYes054
30R:R:I59 R:R:Q32 54.32016.86NoYes064
31L:L:V26 R:R:I59 49.59293.07NoNo006
32L:L:L27 L:L:V26 47.68595.96NoNo000
33R:R:W259 R:R:W272 12.46444.69YesYes188
34R:R:K203 R:R:W272 10.886618.57NoYes178
35R:R:K203 R:R:W199 10.3192.32NoYes074
36L:L:L27 R:R:F105 46.70812.44NoNo007
37R:R:F105 R:R:N58 36.78928.46NoYes076
38R:R:N58 R:R:W62 13.10289.04YesYes469
39R:R:G54 R:R:W62 10.05841.41NoYes059
40R:R:K91 R:R:N58 18.46436.99YesYes486
41R:R:K91 R:R:W98 17.68656.96YesYes488
42R:R:F105 R:R:I89 10.197810.05NoNo077
43R:R:N216 R:R:R172 1009.64YesYes088
44R:R:F169 R:R:N216 66.942116.92YesYes088
45R:R:F169 R:R:L165 62.57056.09YesNo089
46R:R:E223 R:R:L165 61.913911.93YesNo099
47R:R:E223 R:R:H162 34.28218.62YesYes399
48R:R:H162 R:R:R158 29.21364.51YesNo399
49R:R:N159 R:R:R158 27.38536.03YesNo389
50R:R:L154 R:R:N159 22.9494.12YesYes088
51R:R:F151 R:R:L154 19.28042.44YesYes078
52R:R:N216 R:R:S168 34.92457.45YesNo089
53R:R:S168 R:R:W219 34.11247.41NoYes099
54R:R:E223 R:R:I161 12.69276.83YesNo099
55R:R:E223 R:R:L336 28.16319.28YesYes399
56R:R:W219 R:R:W249 20.534920.62YesYes1099
57R:R:W249 R:R:Y211 22.83397.72YesYes098
58R:R:P252 R:R:Y211 20.10674.17YesYes098
59R:R:F218 R:R:P252 17.34318.67YesYes069
60R:R:F337 R:R:L336 22.76326.09YesYes389
61R:R:F299 R:R:F337 14.436.43YesYes388
62R:R:L374 R:R:Y375 11.0264.69NoNo088
63L:L:D3 R:R:R172 40.73254.76YesYes208
64L:L:F6 R:R:Y130 45.27188.25YesYes207
65L:L:R14 L:L:Y10 10.397812.35YesNo700
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:H1 R:R:Q210 8.65 0 No No 0 7 0 1
L:L:H1 R:R:I213 11.93 0 No Yes 0 5 0 1
L:L:S2 R:R:Q356 4.33 2 No Yes 0 7 0 1
L:L:S2 R:R:E360 10.06 2 No Yes 0 7 0 1
L:L:D3 R:R:Y134 5.75 2 Yes Yes 0 7 0 1
L:L:D3 R:R:R172 4.76 2 Yes Yes 0 8 0 1
L:L:D3 R:R:V176 5.84 2 Yes No 0 7 0 1
L:L:D3 R:R:I213 5.6 2 Yes Yes 0 5 0 1
L:L:D3 R:R:L361 5.43 2 Yes No 0 7 0 1
L:L:I5 R:R:Q356 4.12 0 No Yes 0 7 0 1
L:L:F6 R:R:Y123 4.13 2 Yes Yes 0 5 0 1
L:L:F6 R:R:V126 6.55 2 Yes No 0 6 0 1
L:L:F6 R:R:Y130 8.25 2 Yes Yes 0 7 0 1
L:L:F6 R:R:I357 3.77 2 Yes No 0 6 0 1
L:L:F6 R:R:L361 4.87 2 Yes No 0 7 0 1
L:L:T7 R:R:K179 12.01 0 No Yes 0 6 0 1
L:L:T7 R:R:Y184 4.99 0 No Yes 0 3 0 1
L:L:D8 R:R:T274 5.78 1 No Yes 0 5 0 1
L:L:D8 R:R:N275 5.39 1 No No 0 6 0 1
L:L:S9 R:R:Y123 7.63 0 No Yes 0 5 0 1
L:L:Y10 R:R:Y123 10.92 7 No Yes 0 5 0 1
L:L:Y10 R:R:Y184 18.86 7 No Yes 0 3 0 1
L:L:S11 R:R:Y184 5.09 0 No Yes 0 3 0 1
L:L:S11 R:R:D273 8.83 0 No Yes 0 6 0 1
L:L:R12 R:R:T274 5.17 1 Yes Yes 0 5 0 1
L:L:R12 R:R:D276 10.72 1 Yes No 0 3 0 1
L:L:Y13 R:R:K119 5.97 0 Yes No 0 3 0 1
L:L:Y13 R:R:I120 8.46 0 Yes No 0 1 0 1
L:L:Y13 R:R:Y123 9.93 0 Yes Yes 0 5 0 1
L:L:R14 R:R:E24 4.65 7 Yes No 0 5 0 1
L:L:R14 R:R:C25 8.36 7 Yes No 0 8 0 1
L:L:R14 R:R:R26 5.33 7 Yes No 0 4 0 1
L:L:R14 R:R:Y184 9.26 7 Yes Yes 0 3 0 1
L:L:K15 R:R:F82 13.65 0 No No 0 5 0 1
L:L:Q16 R:R:F82 4.68 5 No No 0 5 0 1
L:L:Q16 R:R:D113 5.22 5 No No 0 1 0 1
L:L:Q16 R:R:D116 5.22 5 No Yes 0 3 0 1
L:L:M17 R:R:D116 4.16 5 No Yes 0 3 0 1
L:L:M17 R:R:E117 6.77 5 No No 0 2 0 1
L:L:V19 R:R:F79 5.24 0 No Yes 0 5 0 1
L:L:V19 R:R:F82 10.49 0 No No 0 5 0 1
L:L:K20 R:R:Y111 7.17 5 No No 0 1 0 1
L:L:K20 R:R:D116 8.3 5 No Yes 0 3 0 1
L:L:K20 R:R:E117 6.75 5 No No 0 2 0 1
L:L:Y22 R:R:H28 8.71 8 No No 0 4 0 1
L:L:Y22 R:R:Q32 10.15 8 No Yes 0 4 0 1
R:R:E24 R:R:S185 4.31 0 No No 5 3 1 2
R:R:E24 R:R:L190 15.9 0 No No 5 1 1 2
R:R:L29 R:R:R26 6.07 0 No No 4 4 2 1
R:R:C192 R:R:R26 4.18 0 No No 4 4 2 1
R:R:H28 R:R:Q32 13.6 8 No Yes 4 4 1 1
R:R:E35 R:R:Q32 3.82 0 No Yes 5 4 2 1
R:R:I59 R:R:Q32 6.86 0 No Yes 6 4 1 1
R:R:E35 R:R:V78 9.98 0 No No 5 5 2 2
R:R:F105 R:R:N58 8.46 0 No Yes 7 6 1 2
R:R:F79 R:R:P76 5.78 6 Yes No 5 9 1 2
R:R:P76 R:R:Y83 4.17 6 No Yes 9 4 2 2
R:R:F79 R:R:V78 13.11 6 Yes No 5 5 1 2
R:R:F79 R:R:Y83 11.35 6 Yes Yes 5 4 1 2
R:R:F105 R:R:I89 10.05 0 No No 7 7 1 2
R:R:D113 R:R:D116 7.98 5 No Yes 1 3 1 1
R:R:D116 R:R:E117 9.09 5 Yes No 3 2 1 1
R:R:I120 R:R:I124 5.89 0 No No 1 1 1 2
R:R:F122 R:R:Y123 5.16 0 No Yes 4 5 2 1
R:R:F122 R:R:V126 5.24 0 No No 4 6 2 1
R:R:C362 R:R:V126 5.12 0 No No 6 6 2 1
R:R:T131 R:R:Y130 3.75 0 No Yes 6 7 2 1
R:R:Y130 R:R:Y134 6.95 2 Yes Yes 7 7 1 1
R:R:D180 R:R:Y130 6.9 0 No Yes 6 7 2 1
R:R:L361 R:R:Y130 14.07 2 No Yes 7 7 1 1
R:R:R172 R:R:Y134 7.2 2 Yes Yes 8 7 1 1
R:R:A173 R:R:Y134 4 0 No Yes 7 7 2 1
R:R:V176 R:R:Y134 11.36 2 No Yes 7 7 1 1
R:R:S365 R:R:Y134 7.63 0 No Yes 9 7 2 1
R:R:I213 R:R:R172 8.77 2 Yes Yes 5 8 1 1
R:R:N216 R:R:R172 9.64 0 Yes Yes 8 8 2 1
R:R:F217 R:R:R172 5.34 2 Yes Yes 8 8 2 1
R:R:D180 R:R:K179 5.53 0 No Yes 6 6 2 1
R:R:K179 R:R:L209 5.64 0 Yes No 6 6 1 2
R:R:L183 R:R:Y184 10.55 0 No Yes 6 3 2 1
R:R:D273 R:R:L183 9.5 0 Yes No 6 6 1 2
R:R:D273 R:R:L206 4.07 0 Yes No 6 6 1 2
R:R:I213 R:R:L209 4.28 2 Yes No 5 6 1 2
R:R:Q210 R:R:W259 10.95 1 No Yes 7 8 1 2
R:R:I284 R:R:Q210 6.86 1 No No 7 7 2 1
R:R:F217 R:R:Y341 15.47 2 Yes Yes 8 8 2 2
R:R:I284 R:R:W259 7.05 1 No Yes 7 8 2 2
R:R:D276 R:R:E267 5.2 1 No Yes 3 5 1 2
R:R:D273 R:R:T274 5.78 0 Yes Yes 6 5 1 1
R:R:D276 R:R:T274 4.34 1 No Yes 3 5 1 1
R:R:N275 R:R:W281 12.43 0 No No 6 6 1 2
R:R:I284 R:R:W281 4.7 1 No No 7 6 2 2
R:R:E360 R:R:Y341 7.86 2 Yes Yes 7 8 1 2
R:R:F344 R:R:Q356 17.57 2 Yes Yes 7 7 2 1
R:R:E360 R:R:F344 4.66 2 Yes Yes 7 7 1 2
R:R:E360 R:R:Q356 8.92 2 Yes Yes 7 7 1 1
L:L:R12 R:R:N81 3.62 1 Yes No 0 5 0 1
L:L:I5 R:R:S353 3.1 0 No No 0 4 0 1
L:L:V26 R:R:I59 3.07 0 No No 0 6 0 1
R:R:K179 R:R:S205 3.06 0 Yes No 6 6 1 2
L:L:L27 R:R:F105 2.44 0 No No 0 7 0 1
R:R:D113 R:R:P114 1.61 5 No No 1 4 1 2
R:R:I349 R:R:S353 1.55 0 No No 5 4 2 1
R:R:I120 R:R:T121 1.52 0 No No 1 1 1 2
L:L:A18 R:R:H28 1.46 0 No No 0 4 0 1
R:R:V106 R:R:Y111 1.26 0 No No 6 1 2 1
R:R:I59 R:R:W56 1.17 0 No No 6 7 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7VQX_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.65
Number of Linked Nodes 363
Number of Links 401
Number of Hubs 58
Number of Links mediated by Hubs 204
Number of Communities 11
Number of Nodes involved in Communities 78
Number of Links involved in Communities 103
Path Summary
Number Of Nodes in MetaPath 66
Number Of Links MetaPath 65
Number of Shortest Paths 94798
Length Of Smallest Path 3
Average Path Length 17.7005
Length of Longest Path 42
Minimum Path Strength 1.17
Average Path Strength 7.38974
Maximum Path Strength 22.28
Minimum Path Correlation 0.7
Average Path Correlation 0.956805
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 3.33333
Average % Of Corr. Nodes 57.7623
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 51.9728
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• FnI-like domain   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• FnI-like domain   • Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP41587
Sequence
>7VQX_nogp_Chain_R
ECRFHLEIQ EEETKCAEL LRSQTEKHK ACSGVWDNI TCWRPANVG 
ETVTVPCPK VFSNFYSKA GNISKNCTS DGWSETFPD FVDACGYSD 
PEDESKITF YILVKAIYT LGYSVSLMS LATGSIILC LFRKLHCTR 
NYIHLNLFL SFILRAISV LVKDDVLYS SSGTLHCPD QPSSWVGCK 
LSLVFLQYC IMANFFWLL VEGLYLHTL LVAMLPPRR CFLAYLLIG 
WGLPTVCIG AWTAARLYL EDTGCWDTN DHSVPWWVI RIPILISII 
VNFVLFISI IRILLQKLT SQYKRLAKS TLLLIPLFG VHYMVFAVF 
PISISSKYQ ILFELCLGS FQGLVVAVL YCFLNSEVQ CELKRKWRS 
R


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7VQXB1PeptideVIP and PACAPVPAC1Homo sapiensPACAP27-Gs/β1/γ22.742022-05-18doi.org/10.1038/s41467-022-30041-z
7VQX (No Gprot) B1PeptideVIP and PACAPVPAC1Homo sapiensPACAP27-2.742022-05-18doi.org/10.1038/s41467-022-30041-z
7WBJB1PeptideVIP and PACAPVPAC1Homo sapiensPACAP27-Gs/β1/γ23.422022-05-18doi.org/10.1038/s41467-022-30041-z
7WBJ (No Gprot) B1PeptideVIP and PACAPVPAC1Homo sapiensPACAP27-3.422022-05-18doi.org/10.1038/s41467-022-30041-z




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Download 7VQX_nogp.zip



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