Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:V282 6.8675415
2R:R:L291 7.7475405
3R:R:D295 5.6975415
4R:R:L308 4.6075404
5R:R:M309 5.415406
6R:R:Y310 4.26254125
7R:R:F311 6.338336127
8R:R:W326 6.305447
9R:R:R347 6.616509
10R:R:Y350 6.9469
11R:R:P351 4.492569
12R:R:Y362 5.205409
13R:R:Y369 5.075608
14R:R:V379 3.925406
15R:R:C402 3.08439
16R:R:Y410 6.8075439
17R:R:F411 5.9175408
18R:R:W419 8.94667629
19R:R:W420 8.7425409
20R:R:W427 6.418509
21R:R:I440 3.9875469
22R:R:H448 3.9025429
23R:R:P455 4.89254149
24R:R:I462 4.2025407
25R:R:Q467 5.014507
26R:R:V468 3.71538
27R:R:D469 5.9625499
28R:R:S474 5.05754138
29R:R:V479 5.695639
30R:R:Y498 5.6407
31R:R:P547 4.29409
32R:R:Y555 7.646574
33R:R:R562 4.4725477
34R:R:Y577 6.536505
35R:R:Y607 6.02254139
36R:R:W620 8.085659
37R:R:I621 3.835458
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:M309 R:R:P299 15.9066.71YesNo067
2R:R:M309 R:R:Y310 31.26443.59YesYes065
3R:R:F311 R:R:Y310 34.58395.16YesYes1275
4R:R:F311 R:R:L473 51.33367.31YesNo077
5R:R:D471 R:R:L473 53.25935.43NoNo097
6R:R:D471 R:R:Y607 31.63128.05NoYes1399
7R:R:K606 R:R:Y607 28.7784.78NoYes099
8R:R:K606 R:R:Y555 34.17785.97NoYes094
9R:R:L487 R:R:Y555 17.59599.38NoYes784
10R:R:L487 R:R:R562 16.43523.64NoYes787
11R:R:E566 R:R:R562 28.44532.33NoYes067
12R:R:E566 R:R:L291 23.70836.63NoYes065
13R:R:E558 R:R:Y555 17.73744.49NoYes794
14R:R:E558 R:R:R562 16.5829.3NoYes797
15R:R:Q467 R:R:V479 21.13035.73YesYes079
16R:R:D469 R:R:Q467 14.62487.83YesYes097
17R:R:D469 R:R:Q395 12.26165.22YesNo997
18R:R:Q395 R:R:Y288 11.55945.64NoNo076
19R:R:P299 R:R:Y577 12.353312.52NoYes075
20R:R:G475 R:R:R320 10.71324.5NoNo095
21R:R:G475 R:R:S474 12.15941.86NoYes098
22R:R:F406 R:R:V468 14.373311.8NoYes398
23R:R:F406 R:R:V479 13.24675.24NoYes399
24R:R:F311 R:R:L308 12.87993.65YesYes074
25R:R:M309 R:R:W569 13.53238.14YesNo065
26R:R:F478 R:R:K606 22.87263.72NoNo059
27R:R:F478 R:R:L409 45.95477.31NoNo057
28R:R:L409 R:R:Y369 46.41585.86NoYes078
29R:R:L611 R:R:Y369 10.13417.03NoYes098
30R:R:I323 R:R:Y607 34.5633.63NoYes079
31R:R:I323 R:R:Y369 34.66783.63NoYes078
32R:R:V365 R:R:Y369 1003.79NoYes088
33R:R:V365 R:R:Y362 99.59393.79NoYes089
34R:R:G614 R:R:Y362 74.10134.35NoYes099
35R:R:F348 R:R:R347 18.92425.34NoYes099
36R:R:F348 R:R:I621 45.20025.02NoYes098
37R:R:I621 R:R:T337 64.00393.04YesNo089
38R:R:S359 R:R:T337 64.8039.59NoNo089
39R:R:S359 R:R:S617 65.55233.26NoNo089
40R:R:G614 R:R:S617 67.76883.71NoNo099
41R:R:I356 R:R:Y341 26.902118.13NoNo088
42R:R:F348 R:R:I356 27.85843.77NoNo098
43R:R:R353 R:R:Y341 24.9794.12NoNo098
44R:R:R353 R:R:Y350 24.05168.23NoYes099
45R:R:I440 R:R:Y350 14.88423.63YesYes699
46R:R:I621 R:R:W620 20.75043.52YesYes589
47R:R:I355 R:R:W620 14.73755.87NoYes599
48R:R:I355 R:R:L423 13.78382.85NoNo099
49R:R:L423 R:R:P354 12.80924.93NoNo099
50R:R:P354 R:R:W419 11.75076.76NoYes099
51R:R:V613 R:R:Y362 45.95735.05NoYes099
52R:R:S417 R:R:Y498 10.78136.36NoYes087
53R:R:L495 R:R:S417 11.64593NoNo088
54R:R:L495 R:R:M414 12.50522.83NoNo089
55R:R:M414 R:R:Y410 15.05194.79NoYes099
56R:R:V479 R:R:Y410 17.47812.62YesYes399
57R:R:S474 R:R:V476 27.64364.85YesNo088
58R:R:G502 R:R:W420 24.20614.22NoYes099
59R:R:W420 R:R:Y544 30.085426.04YesNo099
60R:R:V613 R:R:Y544 31.0473.79NoNo099
61R:R:G502 R:R:S424 23.20793.71NoNo098
62R:R:L506 R:R:W427 16.07113.42NoYes089
63R:R:L506 R:R:S424 19.16263NoNo088
64R:R:P547 R:R:V613 17.36273.53YesNo099
65R:R:M609 R:R:P547 13.38036.71NoYes099
66R:R:I550 R:R:M609 10.89665.83NoNo059
67R:R:F478 R:R:V479 39.14543.93NoYes059
68R:R:D471 R:R:S474 22.61065.89NoYes1398
69R:R:V476 R:R:Y369 27.92395.05NoYes088
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8J9O
Class F
SubFamily Protein
Type Frizzled
SubType FZD1
Species Homo Sapiens
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 3.4
Date 2024-01-17 
D.O.I. 10.1038/s41421-023-00627-y
Net Summary
Imin 3.04
Number of Linked Nodes 316
Number of Links 346
Number of Hubs 37
Number of Links mediated by Hubs 148
Number of Communities 16
Number of Nodes involved in Communities 66
Number of Links involved in Communities 75
Path Summary
Number Of Nodes in MetaPath 70
Number Of Links MetaPath 69
Number of Shortest Paths 68161
Length Of Smallest Path 3
Average Path Length 15.745
Length of Longest Path 33
Minimum Path Strength 1.38
Average Path Strength 5.53909
Maximum Path Strength 16.065
Minimum Path Correlation 0.7
Average Path Correlation 0.935028
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 48.6362
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 35.2999
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9UP38
Sequence
>8J9O_Chain_R
PRALKVPSY LNYHFLGEK DCGAPCEPT KVYGLMYFG PEELRFSRT 
WIGIWSVLC CASTLFTVL TYLVDMRRF SYPERPIIF LSGCYTAVA 
VAYIAGFLL EDRVVCNDK FAEDGARTV AQGTKKEGC TILFMMLYF 
FSMASSIWW VILSLTWFL AAGMKWGHE AIEANSQYF HLAAWAVPA 
IKTITILAL GQVDGDVLS GVCFVGLNN VDALRGFVL APLFVYLFI 
GTSFLLAGF VSLFEKLEK LMVRIGVFS VLYTVPATI VIACYFYEQ 
AFRDQWERS WVAQSCKSY AIPCPHLQM SPDFTVFMI KYLMTLIVG 
ITSGFWIWS GKTLNSWRK FYTR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8J9NFProteinFrizzledFZD1Homo sapiens--chim(Gs-CtGq)/&β;1/&γ;23.52024-01-1710.1038/s41421-023-00627-y




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Download 8J9O.zip



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