Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y288 9.14167636
2R:R:G297 2.1575408
3R:R:P302 5.7475403
4R:R:K304 6.002544
5R:R:Y306 8.37442
6R:R:M309 7.4025406
7R:R:F311 5.214517
8R:R:W322 5.674508
9R:R:Y341 8.855429
10R:R:R347 7.415429
11R:R:F348 5.48529
12R:R:Y350 6.078529
13R:R:R353 4.46167629
14R:R:I356 7.09428
15R:R:F357 6.8575428
16R:R:Y369 3.7718
17R:R:F373 4.1575406
18R:R:V380 2.235407
19R:R:F385 10.015433
20R:R:Q395 8.32436
21R:R:F406 7.12459
22R:R:L409 5.04406
23R:R:Y410 6.4659
24R:R:F411 4.445408
25R:R:W419 7.47833629
26R:R:W427 5.32589
27R:R:F447 5.0275409
28R:R:W452 5.716529
29R:R:I462 6.185457
30R:R:V468 4.255409
31R:R:D471 6.02419
32R:R:L473 3.8925418
33R:R:S474 5.006517
34R:R:N483 6.69536
35R:R:I501 2.9775405
36R:R:I537 5.1375489
37R:R:Y544 10.39409
38R:R:Y555 5.15404
39R:R:Y557 5.784519
40R:R:F561 11.7925414
41R:R:Q564 13.505413
42R:R:W565 11.66519
43R:R:C574 6.1425449
44R:R:Y577 5.672544
45R:R:I579 4.475405
46R:R:Y607 5.11518
47R:R:M609 4.855409
48R:R:V613 5.46408
49R:R:W620 9.785409
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:C276 R:R:P277 10.45573.77NoNo099
2R:R:I579 R:R:P277 13.62546.77YesNo059
3R:R:L280 R:R:P277 23.5039.85NoNo049
4R:R:L280 R:R:P299 24.58883.28NoNo047
5R:R:Q395 R:R:Y288 16.74979.02YesYes366
6R:R:M309 R:R:P299 50.11646.71YesNo067
7R:R:P299 R:R:Y577 29.03474.17NoYes074
8R:R:G475 R:R:V380 10.04951.84NoYes097
9R:R:G475 R:R:S474 12.38813.71NoYes097
10R:R:D471 R:R:S474 35.44598.83YesYes197
11R:R:D471 R:R:L473 72.87274.07YesYes198
12R:R:F311 R:R:L473 61.35784.87YesYes178
13R:R:F311 R:R:Y310 59.44266.19YesNo075
14R:R:M309 R:R:Y310 57.500814.37YesNo065
15R:R:G307 R:R:P302 21.79712.03NoYes083
16R:R:G307 R:R:K304 22.98285.23NoYes084
17R:R:K304 R:R:Y577 24.07797.17YesYes444
18R:R:P302 R:R:P313 12.27729.74YesNo033
19R:R:F311 R:R:P598 11.29157.22YesNo079
20R:R:M604 R:R:W322 11.20874.65NoYes078
21R:R:D471 R:R:Y607 20.1495.75YesYes198
22R:R:L608 R:R:W322 24.94964.56NoYes078
23R:R:S474 R:R:Y369 22.53923.82YesYes178
24R:R:Y369 R:R:Y607 24.80593.97YesYes188
25R:R:G618 R:R:T337 13.93941.82NoNo089
26R:R:I621 R:R:T337 29.49094.56NoNo079
27R:R:F348 R:R:I621 41.16662.51YesNo097
28R:R:F348 R:R:R353 31.9174.28YesYes299
29R:R:F357 R:R:R353 44.11145.34YesYes289
30R:R:F357 R:R:W419 73.87099.02YesYes289
31R:R:W419 R:R:W452 92.331212.18YesYes299
32R:R:F411 R:R:W452 94.96516.01YesYes089
33R:R:F411 R:R:F412 97.09593.22YesNo089
34R:R:A364 R:R:F412 97.6389.71NoNo059
35R:R:A364 R:R:M408 98.19573.22NoNo055
36R:R:A368 R:R:M408 98.75964.83NoNo075
37R:R:A368 R:R:L409 1003.15NoYes076
38R:R:L409 R:R:Y369 58.07884.69YesYes068
39R:R:F348 R:R:I356 27.15393.77YesYes298
40R:R:F357 R:R:I356 29.40816.28YesYes288
41R:R:L409 R:R:V476 19.26957.45YesNo067
42R:R:S474 R:R:V476 19.19454.85YesNo077
43R:R:F478 R:R:L409 46.31724.87NoYes066
44R:R:F478 R:R:L481 21.57693.65NoNo067
45R:R:D471 R:R:L481 21.54255.43YesNo097
46R:R:S359 R:R:T337 13.94097.99NoNo089
47R:R:G360 R:R:S359 12.20853.71NoNo068
48R:R:I621 R:R:T340 10.40734.56NoNo079
49R:R:F348 R:R:R347 17.13569.62YesYes299
50R:R:I422 R:R:W419 18.11355.87NoYes069
51R:R:F447 R:R:I422 17.29495.02YesNo096
52R:R:R353 R:R:Y350 14.50025.14YesYes299
53R:R:F447 R:R:Y350 12.35225.16YesYes099
54R:R:I440 R:R:Y350 17.40123.63NoYes099
55R:R:L506 R:R:W427 14.90793.42NoYes089
56R:R:L506 R:R:S424 15.70466.01NoNo088
57R:R:S424 R:R:W420 17.95427.41NoNo089
58R:R:W420 R:R:Y544 18.435326.04NoYes099
59R:R:V613 R:R:Y544 19.63046.31YesYes089
60R:R:P547 R:R:V613 21.03643.53NoYes098
61R:R:M609 R:R:P547 21.52385.03YesNo099
62R:R:L608 R:R:M609 24.47785.65NoYes079
63R:R:D469 R:R:Q395 19.916.53NoYes386
64R:R:D469 R:R:N483 21.73624.04NoYes386
65R:R:G480 R:R:N483 26.89143.39NoYes086
66R:R:G480 R:R:V479 27.84121.84NoNo089
67R:R:F406 R:R:V479 14.9226.55YesNo599
68R:R:F478 R:R:Y410 36.10993.09NoYes069
69R:R:F406 R:R:Y410 18.11045.16YesYes599
70R:R:I462 R:R:Y410 15.2756.04YesYes579
71R:R:I462 R:R:V479 13.90666.14YesNo579
72R:R:L429 R:R:M433 10.477611.31NoNo096
73R:R:I440 R:R:L429 13.94562.85NoNo099
74R:R:K606 R:R:Y607 11.42425.97NoYes098
75R:R:Q564 R:R:W565 15.01112.05YesYes139
76R:R:P594 R:R:Q564 14.03464.74NoYes013
77R:R:I323 R:R:W322 20.36933.52NoYes078
78R:R:I323 R:R:Y369 16.60134.84NoYes178
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8J9N_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.85
Number of Linked Nodes 321
Number of Links 365
Number of Hubs 49
Number of Links mediated by Hubs 179
Number of Communities 8
Number of Nodes involved in Communities 67
Number of Links involved in Communities 93
Path Summary
Number Of Nodes in MetaPath 79
Number Of Links MetaPath 78
Number of Shortest Paths 111346
Length Of Smallest Path 3
Average Path Length 19.0504
Length of Longest Path 36
Minimum Path Strength 1.455
Average Path Strength 5.74378
Maximum Path Strength 16.725
Minimum Path Correlation 0.7
Average Path Correlation 0.940794
Maximum Path Correlation 1
Minimum % Of Corr. Nodes 3.33333
Average % Of Corr. Nodes 47.7494
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 46.3727
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9UP38
Sequence
>8J9N_nogp_Chain_R
SCPRALKVP SYLNYHFLG EKDCGAPCE PTKVYGLMY FGPEELRFS 
RTWIGIWSV LCCASTLFT VLTYLVDMR RFSYPERPI IFLSGCYTA 
VAVAYIAGF LLEDRVVCN DKFAEDGAR TVAQGTKKE GCTILFMML 
YFFSMASSI WWVILSLTW FLAAGMKWG HEAIEANSQ YFHLAAWAV 
PAIKTITIL ALGQVDGDV LSGVCFVGL NNVDALRGF VLAPLFVYL 
FIGTSFLLA GFVSLFRIR TIMKHDGTK TEKLEKLMV RIGVFSVLY 
TVPATIVIA CYFYEQAFR DQWERSWVA QSCKSYAIP CPHLQPHPP 
MSPDFTVFM IKYLMTLIV GITSGFWIW SGKTLNSWR KFYTR


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8J9NFProteinFrizzledFZD1Homo sapiens--chim(Gs-CtGq)/β1/γ23.52024-01-17doi.org/10.1038/s41421-023-00627-y
8J9N (No Gprot) FProteinFrizzledFZD1Homo sapiens--3.52024-01-17doi.org/10.1038/s41421-023-00627-y
8J9OFProteinFrizzledFZD1Homo sapiens---3.42024-01-17doi.org/10.1038/s41421-023-00627-y




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8J9N_nogp.zip



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