Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:P166 4.172555
2R:R:Y177 9.09407
3R:R:P187 11.58405
4R:R:C189 5.152529
5R:R:Y193 9.005425
6R:R:Y233 5.856599
7R:R:Y241 8.67537
8R:R:Y245 6.5637
9R:R:M246 5.2175404
10R:R:F252 7.8775447
11R:R:F253 7.2675405
12R:R:F256 4.805405
13R:R:I268 4.16403
14R:R:L293 5.2325407
15R:R:Y294 6.81619
16R:R:F295 5.3025418
17R:R:W303 10.0267619
18R:R:W304 7.418508
19R:R:F331 3.80833698
20R:R:W336 6.24619
21R:R:T343 3.8825418
22R:R:L346 6.82416
23R:R:D355 7.8925449
24R:R:N356 3.735427
25R:R:S358 3.962548
26R:R:L371 6.61754108
27R:R:Y382 4.83833605
28R:R:V383 2.2625407
29R:R:Y428 8.146537
30R:R:Y439 7.9065104
31R:R:W449 8.8325409
32R:R:R457 7.6025403
33R:R:W497 7.31489
34R:R:V498 4.2825476
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:P166 R:R:Y461 22.3095.56YesNo054
2R:R:R457 R:R:Y461 23.23967.2YesNo034
3R:R:R457 R:R:W453 27.78559YesNo035
4R:R:E450 R:R:W453 29.60237.63NoNo055
5R:R:E450 R:R:L180 30.43593.98NoNo054
6R:R:F179 R:R:L180 31.340118.27NoNo044
7R:R:F179 R:R:P187 32.168824.56NoYes045
8R:R:P187 R:R:S186 27.73463.56YesNo057
9R:R:S186 R:R:Y177 19.14746.36NoYes077
10R:R:P187 R:R:V277 17.22877.07YesNo055
11R:R:P187 R:R:Y366 63.947811.13YesNo055
12R:R:N356 R:R:V277 16.41984.43YesNo075
13R:R:M192 R:R:N356 10.12944.21NoYes267
14R:R:E353 R:R:Y366 64.62034.49NoNo085
15R:R:E353 R:R:L365 65.98165.3NoNo087
16R:R:D355 R:R:L365 66.685313.57YesNo097
17R:R:D355 R:R:S358 47.11874.42YesYes498
18R:R:F252 R:R:S358 56.94395.28YesYes478
19R:R:F252 R:R:L488 18.111612.18YesNo078
20R:R:I209 R:R:L488 17.36022.85NoNo068
21R:R:D355 R:R:V360 45.31514.38YesNo497
22R:R:F252 R:R:V360 45.50099.18YesNo477
23R:R:I206 R:R:S358 12.25851.55NoYes078
24R:R:I206 R:R:S210 11.78671.55NoNo077
25R:R:F252 R:R:L293 1004.87YesYes077
26R:R:I251 R:R:L293 38.54634.28NoYes067
27R:R:I251 R:R:I292 36.129410.3NoNo065
28R:R:I292 R:R:M247 35.64284.37NoNo055
29R:R:L293 R:R:V248 62.65564.47YesNo077
30R:R:V248 R:R:Y245 62.08013.79NoYes077
31R:R:Y241 R:R:Y245 23.83811.91YesYes377
32R:R:F424 R:R:Y241 16.197813.41NoYes087
33R:R:F424 R:R:I238 16.74536.28NoNo088
34R:R:I238 R:R:W497 16.08277.05NoYes089
35R:R:G300 R:R:Y245 34.28314.35NoYes087
36R:R:C244 R:R:G300 33.80143.92NoNo098
37R:R:C244 R:R:W336 32.27233.92NoYes199
38R:R:W303 R:R:W336 14.877611.25YesYes199
39R:R:I306 R:R:W303 10.00289.4NoYes069
40R:R:F296 R:R:M247 28.19499.95NoNo085
41R:R:F296 R:R:W336 26.84355.01NoYes189
42R:R:Y245 R:R:Y428 17.07415.96YesYes377
43R:R:N265 R:R:T278 11.68810.24NoNo055
44R:R:F295 R:R:W336 43.25017.02YesYes189
45R:R:F295 R:R:T343 37.61573.89YesYes188
46R:R:T343 R:R:Y294 35.41264.99YesYes189
47R:R:M298 R:R:Y294 10.933411.97NoYes079
48R:R:L346 R:R:Y294 16.87035.86YesYes169
49R:R:W304 R:R:Y428 14.190411.58YesYes087
50R:R:T308 R:R:W304 11.08798.49NoYes078
51R:R:F417 R:R:W497 11.43654.01NoYes089
52R:R:D355 R:R:Y484 29.77999.2YesNo097
53R:R:E442 R:R:W449 12.86525.45NoYes089
54R:R:E442 R:R:L371 13.53113.98NoYes088
55R:R:K483 R:R:Y484 28.04539.55NoNo087
56R:R:K483 R:R:Y439 22.866411.94NoYes084
57R:R:L371 R:R:Y439 15.015712.89YesYes1084
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8JHC
Class F
SubFamily Protein
Type Frizzled
SubType FZD3
Species Homo Sapiens
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 3.3
Date 2024-01-17 
D.O.I. 10.1038/s41421-023-00627-y
Net Summary
Imin 3.56
Number of Linked Nodes 302
Number of Links 332
Number of Hubs 34
Number of Links mediated by Hubs 140
Number of Communities 10
Number of Nodes involved in Communities 47
Number of Links involved in Communities 56
Path Summary
Number Of Nodes in MetaPath 58
Number Of Links MetaPath 57
Number of Shortest Paths 90188
Length Of Smallest Path 3
Average Path Length 17.5057
Length of Longest Path 37
Minimum Path Strength 1.325
Average Path Strength 6.68181
Maximum Path Strength 21.415
Minimum Path Correlation 0.7
Average Path Correlation 0.93289
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.57143
Average % Of Corr. Nodes 45.957
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 38.9238
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9NPG1
Sequence
>8JHC_Chain_R
WCPRELKID PDLGYSFLH VRDCSPPCP NMYFRREEL SFARYFIGL 
ISIICLSAT LFTFLTFLI DVTRFRYPE RPIIFYAVC YMMVSLIFF 
IGFLLEDRV ACNASIPAQ YKASTVTQG SHNKACTML FMILYFFTM 
AGSVWWVIL TITWFLAAV PKWGSEAIE KKALLFHAS AWGIPGTLT 
IILLAMNKI EGDNISGVC FVGLYDVDA LRYFVLAPL CLYVVVGVS 
LLLAGIISL NRDKLVKFM IRIGVFSIL YLVPLLVVI GCYFYEQAY 
RGIWETTWI QERCREYHI PCPYQVTQM SRPDLILFL MKYLMALIV 
GIPSVFWVG


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8JHIFProteinFrizzledFZD3Homo sapiens--chim(NtGsXLas-Gs)/&β;1/&γ;23.22024-01-1710.1038/s41421-023-00627-y




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Download 8JHC.zip



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