Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:P187 4.5025415
2R:R:Y193 12.302505
3R:R:F194 7.37406
4R:R:Q279 9.04417
5R:R:F290 8.41409
6R:R:L293 7.165406
7R:R:Y294 7.255409
8R:R:F295 6.0525408
9R:R:W303 11.6217659
10R:R:W304 12.095629
11R:R:P317 6.905437
12R:R:W319 6.0375438
13R:R:I324 3.3875439
14R:R:W336 8.775459
15R:R:P339 3.7025409
16R:R:I352 5.4925408
17R:R:E353 6.34417
18R:R:Y366 5.83415
19R:R:F424 4.8925409
20R:R:Y428 14.98528
21R:R:L429 4.735427
22R:R:P431 4.735409
23R:R:W449 14.435409
24R:R:M472 8.415441
25R:R:P475 5.758548
26R:R:I478 4.975445
27R:R:L479 6.0575446
28R:R:K483 7.23408
29R:R:L488 3.5408
30R:R:V490 5.7875428
31R:R:W497 10.6075409
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:R167 R:R:Y177 11.417921.61NoNo036
2R:R:Q279 R:R:Y177 10.485413.53YesNo176
3R:R:C286 R:R:Q279 74.26724.58NoYes097
4R:R:C286 R:R:C361 74.98767.28NoNo099
5R:R:C361 R:R:I352 78.51063.27NoYes098
6R:R:E353 R:R:Y366 58.12665.61YesYes175
7R:R:Y193 R:R:Y366 50.66145.96YesYes055
8R:R:W449 R:R:Y193 15.87638.58YesYes095
9R:R:F194 R:R:Y193 18.873.09YesYes065
10R:R:R446 R:R:Y193 17.295810.29NoYes065
11R:R:F290 R:R:I352 85.163812.56YesYes098
12R:R:F290 R:R:Y294 77.66197.22YesYes099
13R:R:F362 R:R:Y294 42.20085.16NoYes079
14R:R:F362 R:R:L293 50.56979.74NoYes076
15R:R:F252 R:R:L293 42.99717.31NoYes086
16R:R:F252 R:R:L488 39.67313.65NoYes088
17R:R:L488 R:R:S249 23.53773YesNo088
18R:R:L214 R:R:S249 19.94669.01NoNo048
19R:R:I211 R:R:L214 16.30824.28NoNo034
20R:R:F253 R:R:I211 12.622811.3NoNo053
21R:R:F253 R:R:L257 11.38388.53NoNo054
22R:R:I254 R:R:L257 10.13964.28NoNo044
23R:R:F290 R:R:V363 15.12696.55YesNo099
24R:R:F362 R:R:V363 14.54023.93NoNo079
25R:R:L488 R:R:S210 11.38384.5YesNo088
26R:R:G207 R:R:S210 10.13963.71NoNo068
27R:R:M298 R:R:Y294 97.514210.78NoYes079
28R:R:M298 R:R:P339 1003.35NoYes079
29R:R:F295 R:R:P339 60.46834.33YesYes089
30R:R:F295 R:R:W336 41.79744.01YesYes089
31R:R:W303 R:R:W336 71.254918.74YesYes599
32R:R:P237 R:R:W303 60.32955.4NoYes089
33R:R:L307 R:R:P237 43.033811.49NoNo098
34R:R:L307 R:R:W311 42.192913.67NoNo099
35R:R:W311 R:R:W497 38.88475.62NoYes099
36R:R:F424 R:R:W497 33.81094.01YesYes099
37R:R:F424 R:R:I238 15.28673.77YesNo099
38R:R:I238 R:R:I239 14.1422.94NoNo098
39R:R:A299 R:R:P339 39.98483.74NoYes099
40R:R:A299 R:R:W336 39.80413.89NoYes099
41R:R:F240 R:R:W303 10.448722.05NoYes589
42R:R:F240 R:R:R236 16.90553.21NoNo089
43R:R:A328 R:R:R236 14.80214.15NoNo089
44R:R:A328 R:R:E325 12.7594.53NoNo087
45R:R:E325 R:R:Y233 10.645210.1NoNo079
46R:R:P237 R:R:T310 23.8183.5NoNo088
47R:R:F295 R:R:F296 22.204512.86YesNo088
48R:R:C244 R:R:F296 20.82144.19NoNo098
49R:R:C244 R:R:G300 20.50973.92NoNo098
50R:R:G300 R:R:Y245 20.22425.79NoNo088
51R:R:V490 R:R:Y245 12.148711.36YesNo088
52R:R:L379 R:R:M298 12.06752.83NoNo077
53R:R:W304 R:R:Y428 12.022943.41YesYes298
54R:R:I324 R:R:T310 18.39591.52YesNo098
55R:R:I419 R:R:V423 10.61631.54NoNo056
56R:R:L427 R:R:V423 11.77672.98NoNo076
57R:R:L427 R:R:P493 14.08184.93NoNo078
58R:R:F424 R:R:P493 18.6295.78YesNo098
59R:R:R446 R:R:V368 11.19263.92NoNo063
60R:R:E353 R:R:Q279 56.680711.47YesYes177
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8QW4
Class F
SubFamily Protein
Type Frizzled
SubType FZD3
Species Homo Sapiens
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 2.9
Date 2024-09-04
D.O.I. doi.org/10.1038/s41467-024-51451-1
Net Summary
Imin 3.07
Number of Linked Nodes 294
Number of Links 313
Number of Hubs 31
Number of Links mediated by Hubs 106
Number of Communities 7
Number of Nodes involved in Communities 37
Number of Links involved in Communities 48
Path Summary
Number Of Nodes in MetaPath 61
Number Of Links MetaPath 60
Number of Shortest Paths 63379
Length Of Smallest Path 3
Average Path Length 16.7118
Length of Longest Path 34
Minimum Path Strength 1.28
Average Path Strength 7.06631
Maximum Path Strength 29.325
Minimum Path Correlation 0.7
Average Path Correlation 0.937768
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.33333
Average % Of Corr. Nodes 49.3909
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 41.7265
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9NPG1
Sequence
>8QW4_Chain_R
CPRELKILG YSFLHVRDC SPPCPNMYF RREELSFAR YFIGLISII 
CLSATLFTF LTFLITRFR YPERPIIFY AVCYMMVSL IFFIGFLLE 
DRVACNASS TVTQGSHNK ACTMLFMIL YFFTMAGSV WWVILTITW 
FLAAVPKWG SEAIEKKAL LFHASAWGI PGTLTIILL AMNKIEGDN 
ISGVCFVGL YDVDALRYF VLAPLCLYV VVGVSLLLA GIISLNRVR 
IEIPLEKEN QDKLVKFMI RIGVFSILY LVPLLVVIG CYFYEQAYR 
GIWETTWIQ ERCREYQVT QMSRPDLIL FLMKYLMAL IVGIPSVFW 
VGSKK


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8JHCFProteinFrizzledFZD3Homo sapiens---3.32024-01-17doi.org/10.1038/s41421-023-00627-y
8JHIFProteinFrizzledFZD3Homo sapiens--chim(NtGsXLas-Gs)/β1/γ23.22024-01-17doi.org/10.1038/s41421-023-00627-y
8JHI (No Gprot) FProteinFrizzledFZD3Homo sapiens--3.22024-01-17doi.org/10.1038/s41421-023-00627-y




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Download 8QW4.zip



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