Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y177 12.7175406
2R:R:P187 8.3425405
3R:R:I209 4.475405
4R:R:T217 6.3475418
5R:R:F221 4.5325407
6R:R:Y233 7.005609
7R:R:F240 9.8475428
8R:R:Y241 6.444518
9R:R:T278 2.3375406
10R:R:F290 6.672549
11R:R:Y294 8.0275449
12R:R:F295 6.838508
13R:R:W303 11.0167629
14R:R:W311 4.095409
15R:R:P339 4.3725409
16R:R:L346 9.1125447
17R:R:I352 5.97408
18R:R:D355 5.916539
19R:R:N356 5.76436
20R:R:I357 5.44438
21R:R:V363 5.4025449
22R:R:D367 5.7925406
23R:R:L371 4.9825498
24R:R:Y382 4.4625405
25R:R:I404 5.044107
26R:R:Q411 10.085107
27R:R:Y428 11.075418
28R:R:Y439 4.594595
29R:R:W449 10.035409
30R:R:P475 7.915408
31R:R:K483 5.2775408
32R:R:P493 5.888518
33R:R:V495 1.945408
34R:R:W497 9.03833609
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F179 R:R:P188 10.48634.33NoNo055
2R:R:F179 R:R:P187 10.470713NoYes055
3R:R:I171 R:R:Y177 14.938112.09NoYes046
4R:R:Q279 R:R:Y177 23.929424.8NoYes076
5R:R:Q279 R:R:S178 13.23685.78NoNo073
6R:R:D367 R:R:S178 14.37364.42YesNo063
7R:R:E353 R:R:Q279 13.23095.1NoNo077
8R:R:D367 R:R:E353 14.42239.09YesNo067
9R:R:F179 R:R:L180 16.697.31NoNo054
10R:R:P187 R:R:Y366 11.85089.74YesNo055
11R:R:M192 R:R:P188 16.52075.03NoNo075
12R:R:M192 R:R:N356 38.01497.01NoYes076
13R:R:N356 R:R:Y366 12.52243.49YesNo065
14R:R:D355 R:R:N356 45.28544.04YesYes396
15R:R:D355 R:R:L365 47.30984.07YesNo096
16R:R:F362 R:R:L365 47.73423.65NoNo076
17R:R:F362 R:R:Y294 56.20967.22NoYes079
18R:R:F290 R:R:Y294 35.2768.25YesYes499
19R:R:F290 R:R:I352 27.470210.05YesYes098
20R:R:C286 R:R:I352 22.04514.91NoYes098
21R:R:C286 R:R:G354 14.43981.96NoNo898
22R:R:G354 R:R:T278 13.86941.82NoYes086
23R:R:F362 R:R:V363 21.95555.24NoYes079
24R:R:F290 R:R:V363 24.14545.24YesYes499
25R:R:M192 R:R:Y193 25.38544.79NoNo075
26R:R:P475 R:R:Y193 21.67724.17YesNo085
27R:R:P475 R:R:W449 10.612820.27YesYes089
28R:R:M298 R:R:Y294 96.753110.78NoYes079
29R:R:M298 R:R:P339 96.68893.35NoYes079
30R:R:F295 R:R:P339 1007.22YesYes089
31R:R:F295 R:R:F296 67.97878.57YesNo088
32R:R:C244 R:R:F296 66.41944.19NoNo098
33R:R:C244 R:R:G300 65.36053.92NoNo098
34R:R:G300 R:R:Y245 64.82524.35NoNo088
35R:R:Y241 R:R:Y245 63.74295.96YesNo088
36R:R:S494 R:R:Y241 32.5455.09NoYes188
37R:R:S494 R:R:T217 28.54477.99NoYes188
38R:R:M246 R:R:T217 22.53954.52NoYes058
39R:R:M246 R:R:S249 21.91279.2NoNo058
40R:R:C213 R:R:S249 18.58413.44NoNo788
41R:R:C213 R:R:L488 17.90274.76NoNo088
42R:R:I209 R:R:L488 11.28442.85YesNo058
43R:R:F295 R:R:W336 68.07415.01YesNo089
44R:R:W303 R:R:W336 42.924214.06YesNo299
45R:R:F240 R:R:W303 24.151322.05YesYes289
46R:R:F240 R:R:I239 16.11777.54YesNo088
47R:R:F224 R:R:I239 14.66568.79NoNo098
48R:R:H332 R:R:W336 24.63217.41NoNo299
49R:R:F240 R:R:H332 23.99173.39YesNo289
50R:R:F224 R:R:F231 11.74963.22NoNo099
51R:R:F240 R:R:R236 31.69436.41YesNo089
52R:R:R236 R:R:Y233 30.298610.29NoYes099
53R:R:I324 R:R:Y233 34.66297.25NoYes099
54R:R:I306 R:R:W303 17.05797.05NoYes279
55R:R:F331 R:R:I306 16.41363.77NoNo087
56R:R:F331 R:R:Y233 15.06857.22NoYes089
57R:R:P493 R:R:Y241 29.41688.34YesYes188
58R:R:F424 R:R:P493 27.87717.22NoYes098
59R:R:F424 R:R:W497 25.58211.02NoYes099
60R:R:L346 R:R:Y294 17.79185.86YesYes479
61R:R:L346 R:R:V363 16.24437.45YesYes479
62R:R:F417 R:R:W497 21.6833.01NoYes089
63R:R:I324 R:R:L313 23.93724.28NoNo098
64R:R:F312 R:R:L313 21.78033.65NoNo078
65R:R:F312 R:R:V316 15.28656.55NoNo077
66R:R:P317 R:R:V316 10.93795.3NoNo077
67R:R:G364 R:R:V363 48.53813.68NoYes089
68R:R:F417 R:R:L397 16.12162.44NoNo088
69R:R:L397 R:R:M418 15.33717.07NoNo088
70R:R:M418 R:R:R401 12.84944.96NoNo089
71R:R:Q411 R:R:R401 11.17539.35YesNo079
72R:R:I454 R:R:L180 15.18922.85NoNo034
73R:R:I454 R:R:P466 13.71563.39NoNo035
74R:R:D367 R:R:G364 35.37345.03YesNo068
75R:R:G364 R:R:L371 15.75575.13NoYes088
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8JHI_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.35
Number of Linked Nodes 303
Number of Links 328
Number of Hubs 34
Number of Links mediated by Hubs 131
Number of Communities 11
Number of Nodes involved in Communities 43
Number of Links involved in Communities 49
Path Summary
Number Of Nodes in MetaPath 76
Number Of Links MetaPath 75
Number of Shortest Paths 88630
Length Of Smallest Path 3
Average Path Length 17.451
Length of Longest Path 37
Minimum Path Strength 1.455
Average Path Strength 6.38276
Maximum Path Strength 18.445
Minimum Path Correlation 0.7
Average Path Correlation 0.94324
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.57143
Average % Of Corr. Nodes 50.7037
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 36.9389
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• response to stimulus   • response to chemical   • response to xenobiotic stimulus   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • cell surface receptor signaling pathway   • signaling   • canonical Wnt signaling pathway   • biological regulation   • cell communication   • cellular process   • signal transduction   • Wnt signaling pathway   • developmental process   • multicellular organismal process   • head development   • cell population proliferation   • animal organ development   • brain development   • nervous system development   • multicellular organism development   • central nervous system development   • cell proliferation in midbrain   • midbrain development   • anatomical structure development   • neural precursor cell proliferation   • system development   • ear morphogenesis   • embryonic organ morphogenesis   • ear development   • sensory organ development   • embryonic morphogenesis   • embryo development   • anatomical structure morphogenesis   • sensory organ morphogenesis   • inner ear development   • inner ear morphogenesis   • animal organ morphogenesis   • embryonic organ development   • non-canonical Wnt signaling pathway   • epithelium development   • epidermis development   • molting cycle process   • hair cycle   • tissue development   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • hair cycle process   • sympathetic nervous system development   • ganglion development   • autonomic nervous system development   • sympathetic ganglion development   • cellular developmental process   • generation of neurons   • neurogenesis   • neuron differentiation   • cell differentiation   • neuron migration   • motor neuron migration   • cell migration   • cell motility   • regulation of mitotic cell cycle, embryonic   • negative regulation of biological process   • negative regulation of cell cycle   • mitotic cell cycle   • negative regulation of mitotic cell cycle   • mitotic cell cycle, embryonic   • regulation of mitotic cell cycle   • negative regulation of cellular process   • negative regulation of mitotic cell cycle, embryonic   • cell cycle   • regulation of cell cycle   • commissural neuron axon guidance   • axonogenesis   • cell projection organization   • plasma membrane bounded cell projection morphogenesis   • cell development   • neuron projection development   • cell morphogenesis   • cellular component organization   • cell projection morphogenesis   • neuron projection morphogenesis   • cellular component organization or biogenesis   • plasma membrane bounded cell projection organization   • axon guidance   • axon development   • cell morphogenesis involved in neuron differentiation   • neuron projection guidance   • neuron development   • negative regulation of programmed cell death   • regulation of apoptotic process   • negative regulation of execution phase of apoptosis   • regulation of programmed cell death   • cell death   • regulation of execution phase of apoptosis   • execution phase of apoptosis   • negative regulation of apoptotic process   • apoptotic process   • programmed cell death   • post-anal tail morphogenesis   • response to electrical stimulus   • response to abiotic stimulus   • embryonic epithelial tube formation   • chordate embryonic development   • tube formation   • epithelial tube formation   • tube morphogenesis   • primary neural tube formation   • embryo development ending in birth or egg hatching   • epithelial tube morphogenesis   • morphogenesis of embryonic epithelium   • neural tube development   • tube development   • morphogenesis of an epithelium   • tissue morphogenesis   • neural tube closure   • neural tube formation   • anatomical structure formation involved in morphogenesis   • tube closure   • Wnt signaling pathway, planar cell polarity pathway   • dopaminergic neuron axon guidance   • serotonergic neuron axon guidance   • brain morphogenesis   • midbrain morphogenesis   • neuroblast proliferation   • positive regulation of nervous system development   • positive regulation of cell population proliferation   • regulation of developmental process   • positive regulation of biological process   • regulation of neuroblast proliferation   • regulation of cell differentiation   • regulation of neurogenesis   • regulation of cell development   • regulation of nervous system development   • positive regulation of developmental process   • positive regulation of cell differentiation   • positive regulation of neurogenesis   • regulation of multicellular organismal process   • positive regulation of cellular process   • regulation of neural precursor cell proliferation   • regulation of multicellular organismal development   • positive regulation of cell development   • positive regulation of neural precursor cell proliferation   • regulation of cell population proliferation   • positive regulation of multicellular organismal process   • positive regulation of neuroblast proliferation   • establishment of planar polarity   • establishment of tissue polarity   • morphogenesis of a polarized epithelium   • cell periphery   • cellular anatomical structure   • apical part of cell   • membrane   • plasma membrane   • plasma membrane region   • apical plasma membrane   • cell surface   • filopodium tip   • cell projection   • actin-based cell projection   • filopodium   • plasma membrane bounded cell projection   • somatodendritic compartment
Gene OntologyCellular Component• cell periphery   • cellular anatomical structure   • apical part of cell   • membrane   • plasma membrane   • plasma membrane region   • apical plasma membrane   • cell surface   • filopodium tip   • cell projection   • actin-based cell projection   • filopodium   • plasma membrane bounded cell projection   • somatodendritic compartment   • dendrite   • dendritic tree   • neuron projection   • intracellular anatomical structure   • cytoplasm   • synapse   • cell junction   • glutamatergic synapse   • presynaptic active zone membrane   • presynaptic membrane   • synaptic membrane   • presynapse   • presynaptic active zone   • cell body   • neuronal cell body   • axon   • lateral plasma membrane   • protein binding   • binding   • G-protein beta-subunit binding   • fibroblast proliferation   • cell population proliferation   • cellular process   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • organelle membrane   • cytosol   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • adenylate cyclase regulator activity   • mu-type opioid receptor binding   • signaling receptor binding   • G protein-coupled receptor binding   • opioid receptor binding   • beta-2 adrenergic receptor binding   • adrenergic receptor binding   • ionotropic glutamate receptor binding   • glutamate receptor binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • peptide hormone receptor binding   • corticotropin-releasing hormone receptor binding   • corticotropin-releasing hormone receptor 1 binding   • hormone receptor binding   • neuropeptide receptor binding   • D1 dopamine receptor binding   • dopamine receptor binding   • G-protein beta/gamma-subunit complex binding   • G protein activity   • enzyme activator activity   • cyclase activator activity   • molecular function activator activity   • adenylate cyclase activator activity   • cation binding   • metal ion binding   • insulin-like growth factor receptor binding   • skeletal system development   • bone development   • regulation of body fluid levels   • wound healing   • homotypic cell-cell adhesion   • cell activation   • hemostasis   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • response to stress   • coagulation   • regulation of biological quality   • response to wounding   • platelet activation   • developmental growth   • growth   • homeostatic process   • positive regulation of biological process   • adaptive thermogenesis   • positive regulation of metabolic process   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • positive regulation of multicellular organismal process   • metabolic process   • regulation of multicellular organismal process   • regulation of metabolic process   • positive regulation of cellular process   • serotonin receptor signaling pathway   • adenylate cyclase-activating serotonin receptor signaling pathway
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9NPG1
Sequence
>8JHI_nogp_Chain_R
WCPRELKID GYSFLHVRD CSPPCPNMY FRREELSFA RYFIGLISI 
ICLSATLFT FLTFLIDVT RFRYPERPI IFYAVCYMM VSLIFFIGF 
LLEDRVACN STVTQGSHN KACTMLFMI LYFFTMAGS VWWVILTIT 
WFLAAVPKW GSEAIEKKA LLFHASAWG IPGTLTIIL LAMNKIEGD 
NISGVCFVG LYDVDALRY FVLAPLCLY VVVGVSLLL GIISLNRVR 
IEIPLEKEN QDKLVKFMI RIGVFSILY LVPLLVVIG CYFYEQAYR 
GIWETTWIQ ERCREYHIP CPMSRPDLI LFLMKYLMA LIVGIPSVF 
WVGSKK


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8JHCFProteinFrizzledFZD3Homo sapiens---3.32024-01-17doi.org/10.1038/s41421-023-00627-y
8JHIFProteinFrizzledFZD3Homo sapiens--chim(NtGsXLas-Gs)/β1/γ23.22024-01-17doi.org/10.1038/s41421-023-00627-y
8JHI (No Gprot) FProteinFrizzledFZD3Homo sapiens--3.22024-01-17doi.org/10.1038/s41421-023-00627-y
8QW4FProteinFrizzledFZD3Homo sapiens---2.92024-09-04doi.org/10.1038/s41467-024-51451-1




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8JHI_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.