Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F13 3.866529
2R:R:I18 3.968545
3R:R:Y36 5.755409
4R:R:N43 4.425409
5R:R:I46 3.1475408
6R:R:I49 2.7275405
7R:R:L56 4.8325459
8R:R:Y61 5.578559
9R:R:Y62 5.16406
10R:R:F63 4.048508
11R:R:M66 2.5825407
12R:R:F95 4.855424
13R:R:F99 5.9275424
14R:R:M102 3.895405
15R:R:F103 4.345405
16R:R:M111 4.6775475
17R:R:E112 6.0725439
18R:R:R123 4.545499
19R:R:V125 2.3925407
20R:R:F154 4.5825472
21R:R:I157 5.1775405
22R:R:L160 4.6325404
23R:R:Y169 4.46167625
24R:R:H177 7.294518
25R:R:Y179 4.83857705
26R:R:H182 5.1825405
27R:R:M186 4.11754115
28R:R:Y199 5.5275403
29R:R:D211 8.895486
30R:R:Y219 5.035699
31R:R:H245 5.17499
32R:R:Y253 6.852586
33R:R:M256 7.15403
34R:R:H263 8.38517
35R:R:R264 6.0185114
36R:R:V269 4.382512
37R:R:M277 2.325405
38R:R:L282 4.748507
39R:R:N289 6.11439
40R:R:Y293 4.658509
41R:R:R303 8.21608
42R:R:I304 2.105405
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:L164 R:R:Y169 12.81265.86NoYes045
2R:R:H182 R:R:L164 21.36665.14YesNo054
3R:R:H182 R:R:L160 43.12837.71YesYes054
4R:R:I157 R:R:L160 55.45712.85YesYes054
5R:R:F110 R:R:I157 75.52358.79NoYes025
6R:R:F110 R:R:M208 80.83477.46NoNo022
7R:R:M208 R:R:M256 81.60674.33NoYes023
8R:R:M256 R:R:Y281 91.885511.97YesNo037
9R:R:L282 R:R:Y281 64.56148.21YesNo077
10R:R:L282 R:R:Y179 52.01117.03YesYes075
11R:R:N279 R:R:Y179 15.70453.49NoYes095
12R:R:I18 R:R:N279 14.43772.83YesNo059
13R:R:I105 R:R:L282 10.69622.85NoYes057
14R:R:Q101 R:R:T81 16.616812.76NoNo096
15R:R:L15 R:R:T81 14.37862.95NoNo086
16R:R:Q101 R:R:Y179 10.8553.38NoYes095
17R:R:I93 R:R:L15 122.85NoNo098
18R:R:T78 R:R:Y179 26.88833.75NoYes065
19R:R:T78 R:R:Y36 25.70646.24NoYes069
20R:R:L79 R:R:Y36 18.61138.21NoYes059
21R:R:L79 R:R:L83 16.04061.38NoNo058
22R:R:L83 R:R:W87 13.44041.14NoNo086
23R:R:F252 R:R:M256 1008.71NoYes063
24R:R:E112 R:R:F252 96.20684.66YesNo096
25R:R:D71 R:R:E112 24.823610.39NoYes399
26R:R:D71 R:R:N43 27.70456.73NoYes099
27R:R:N43 R:R:P290 20.90866.52YesNo099
28R:R:I46 R:R:P290 20.04431.69YesNo089
29R:R:I46 R:R:V295 16.69811.54YesNo088
30R:R:I304 R:R:V295 15.13571.54YesNo058
31R:R:I300 R:R:I304 13.03052.94NoYes075
32R:R:I300 R:R:Y61 12.51713.63NoYes079
33R:R:Q299 R:R:Y61 26.57433.38NoYes569
34R:R:Q299 R:R:R303 23.874410.51NoYes068
35R:R:I49 R:R:R303 14.95843.76YesYes058
36R:R:E112 R:R:L67 48.07763.98YesNo399
37R:R:L67 R:R:V115 48.16255.96NoNo097
38R:R:M66 R:R:V115 27.80064.56YesNo077
39R:R:F63 R:R:M66 22.40442.49YesYes087
40R:R:F63 R:R:V142 55.19113.93YesNo088
41R:R:P59 R:R:V142 42.58173.53NoNo098
42R:R:E58 R:R:P59 38.64453.14NoNo079
43R:R:E58 R:R:Y61 36.50977.86NoYes079
44R:R:M119 R:R:V115 22.19393.04NoNo097
45R:R:F63 R:R:M119 47.6382.49YesNo089
46R:R:E112 R:R:N289 24.48015.26YesYes399
47R:R:N289 R:R:Y293 27.19116.98YesYes099
48R:R:M119 R:R:Y293 29.23363.59NoYes099
49R:R:V142 R:R:Y62 11.44975.05NoYes086
50R:R:L56 R:R:Y61 12.02227.03YesYes599
51R:R:F99 R:R:M102 17.53653.73YesYes045
52R:R:M102 R:R:P161 17.063.35YesNo055
53R:R:F103 R:R:P161 11.33152.89YesNo055
54R:R:M256 R:R:Y253 23.44233.59YesYes036
55R:R:V249 R:R:Y219 17.84672.52NoYes089
56R:R:V249 R:R:Y253 18.24192.52NoYes086
57R:R:C128 R:R:F124 13.64736.98NoNo087
58R:R:C128 R:R:I127 15.54571.64NoNo089
59R:R:I127 R:R:R123 16.54292.51NoYes099
60R:R:R123 R:R:Y219 12.48015.14YesYes999
61R:R:L259 R:R:Y281 30.8927.03NoNo057
62R:R:H263 R:R:L259 15.23557.71YesNo075
63R:R:H182 R:R:M186 15.72673.94YesYes055
64R:R:M186 R:R:R264 11.82644.96YesYes1154
65R:R:L259 R:R:M277 15.04712.83NoYes055
66R:R:H263 R:R:H274 14.37867.17YesNo176
67R:R:P270 R:R:V269 10.63343.53NoYes062
68R:R:F103 R:R:I157 20.34353.77YesYes055
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8UXV_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.83
Number of Linked Nodes 276
Number of Links 303
Number of Hubs 42
Number of Links mediated by Hubs 160
Number of Communities 11
Number of Nodes involved in Communities 40
Number of Links involved in Communities 45
Path Summary
Number Of Nodes in MetaPath 69
Number Of Links MetaPath 68
Number of Shortest Paths 54200
Length Of Smallest Path 3
Average Path Length 14.0131
Length of Longest Path 28
Minimum Path Strength 1.26
Average Path Strength 5.33348
Maximum Path Strength 15.72
Minimum Path Correlation 0.7
Average Path Correlation 0.91924
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.54545
Average % Of Corr. Nodes 43.3013
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 43.5678
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProt-
Sequence
>8UXV_nogp_Chain_R
SCATFLLTG PGLEAAHIW SPFCFMYIA LGNGTILFI IRTEPLHEP 
MYYFMLAAT DLGLSLSTL PTVLGIFWF NREISFNAC FAQMFFIHG 
FSFMESSLL AMAFDRFVA ICPLRYASI TNTRVAKIG LAITRSFLL 
ILPLPFLLK RLPHSNVLS HSYLHQDVM KLACADIRF NSIYGLFVV 
LSTMGLDSL ILFSYILIL KTVLGIASR EERLKLNTC VSHICAVLV 
FYVPMIGLS LHRFGKHVP PVVHVLMAV YLLVPPVMN PIIYSVKTK 
QIRKRILRL FSLIIILIL SAVNLLYCL AVN


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8UXVO1Odorant receptorsOdorant family 51consOR51Homo sapiens--Gs/β1/γ23.22024-10-30doi.org/10.1038/s41586-024-08126-0
8UXV (No Gprot) O1Odorant receptorsOdorant family 51consOR51Homo sapiens--3.22024-10-30doi.org/10.1038/s41586-024-08126-0




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 8UXV_nogp.zip



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