Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:Y139 7.275404
2R:R:Y146 4.54438
3R:R:L154 2.9325406
4R:R:L157 4.545409
5R:R:F167 4.2975406
6R:R:L181 8.0575409
7R:R:F182 3.98333608
8R:R:F185 5.254508
9R:R:R188 6.16408
10R:R:F222 6.71407
11R:R:Q223 6.652577
12R:R:Y224 5.765409
13R:R:F230 6.8775408
14R:R:F231 4.7925485
15R:R:W232 10.8409
16R:R:Y239 8.1375408
17R:R:Y241 5.08408
18R:R:P266 5.374589
19R:R:W286 13.394569
20R:R:F312 7.498529
21R:R:I347 5.1475428
22R:R:F350 7.00667629
23R:R:H353 10.17418
24R:R:Y354 10.32518
25R:R:I355 4.6375415
26R:R:F357 5.476516
27R:R:F360 6.248515
28R:R:K365 5.345412
29R:R:K369 6.0125418
30R:R:F372 4.765414
31R:R:E373 6.385417
32L:L:H1 7.33400
33L:L:D3 5.0025400
34L:L:F6 6.024530
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:F6 R:R:Y139 12.45456.19YesYes004
2L:L:F6 R:R:L374 19.33273.65YesNo307
3L:L:D3 R:R:L374 26.58795.43YesNo007
4L:L:D3 R:R:R188 63.57874.76YesYes008
5L:L:D3 R:R:F222 24.20234.78YesYes007
6R:R:F185 R:R:L157 29.55593.65YesYes089
7R:R:F185 R:R:N229 99.78598.46YesNo088
8R:R:N229 R:R:R188 1008.44NoYes088
9R:R:F182 R:R:L157 20.68188.53YesYes089
10R:R:F182 R:R:L181 24.69913.65YesYes089
11R:R:F185 R:R:L181 60.17828.53YesYes089
12R:R:F182 R:R:V384 16.3392.62YesNo089
13R:R:F185 R:R:V384 16.97292.62YesNo089
14R:R:C389 R:R:I163 35.06794.91NoNo098
15R:R:A160 R:R:C389 37.52623.61NoNo099
16R:R:A160 R:R:F182 39.9762.77NoYes098
17R:R:F167 R:R:I163 27.62862.51YesNo068
18R:R:F167 R:R:L170 17.76956.09YesNo069
19R:R:E394 R:R:L170 10.15896.63NoNo099
20R:R:W232 R:R:W263 11.388115.93YesNo098
21R:R:W263 R:R:Y224 18.85317.72NoYes089
22R:R:P266 R:R:Y224 22.93032.78YesYes099
23R:R:M227 R:R:P266 25.0766.71NoYes859
24R:R:I301 R:R:M227 34.33984.37NoNo075
25R:R:F230 R:R:I301 35.234910.05YesNo087
26R:R:F230 R:R:R188 49.07283.21YesYes088
27R:R:E236 R:R:L181 51.54415.9NoYes099
28R:R:E236 R:R:I177 12.51874.1NoNo099
29R:R:I177 R:R:Y239 11.40958.46NoYes098
30R:R:E236 R:R:L349 42.19455.3NoNo099
31R:R:F222 R:R:Q223 22.43788.2YesYes077
32L:L:H1 R:R:Q223 30.69518.65YesYes007
33L:L:D3 L:L:H1 25.81695.04YesYes000
34R:R:R277 R:R:W286 16.724523.99NoYes089
35R:R:R277 R:R:W273 32.759411NoNo088
36R:R:Q223 R:R:W273 33.76595.48YesNo778
37R:R:I297 R:R:Q223 15.99215.49NoYes777
38L:L:H1 R:R:V226 10.300212.45YesNo005
39R:R:F230 R:R:Y354 31.603110.32YesYes088
40R:R:F350 R:R:L349 37.05517.31YesNo099
41R:R:F350 R:R:L240 12.45026.09YesNo099
42R:R:L293 R:R:R277 14.97.29NoNo048
43R:R:I297 R:R:W294 14.93.52NoNo077
44R:R:F312 R:R:F350 22.83183.22YesYes299
45R:R:F312 R:R:I316 10.261710.05YesNo097
46R:R:F312 R:R:I347 11.32815.02YesYes298
47R:R:E373 R:R:Y354 19.78247.86YesYes178
48R:R:E373 R:R:F357 12.15045.83YesYes176
49R:R:F230 R:R:V226 10.93413.93YesNo085
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:K20 R:R:D132 6.91 0 No No 0 1 0 1
R:R:Q135 R:R:Y139 7.89 0 No Yes 3 4 1 1
L:L:Y13 R:R:Q135 19.16 0 No No 0 3 0 1
L:L:Y13 R:R:T136 7.49 0 No No 0 2 0 1
R:R:F138 R:R:V142 3.93 0 No No 5 5 2 1
L:L:F6 R:R:Y139 6.19 3 Yes Yes 0 4 0 1
L:L:S9 R:R:Y139 5.09 0 No Yes 0 4 0 1
L:L:Y10 R:R:Y139 9.93 0 No Yes 0 4 0 1
L:L:F6 R:R:V142 7.87 3 Yes No 0 5 0 1
R:R:K143 R:R:Y146 4.78 0 No Yes 5 8 2 1
R:R:L374 R:R:Y146 4.69 3 No Yes 7 8 1 1
L:L:F6 R:R:Y146 6.19 3 Yes Yes 0 8 0 1
R:R:R188 R:R:Y150 8.23 0 Yes No 8 8 1 2
R:R:V192 R:R:Y150 7.57 0 No No 7 8 2 2
R:R:N229 R:R:R188 8.44 0 No Yes 8 8 2 1
R:R:F230 R:R:R188 3.21 0 Yes Yes 8 8 2 1
L:L:D3 R:R:R188 4.76 0 Yes Yes 0 8 0 1
R:R:F222 R:R:V192 3.93 0 Yes No 7 7 1 2
R:R:K195 R:R:M219 8.64 0 No No 7 5 2 2
R:R:F222 R:R:K195 9.93 0 Yes No 7 7 1 2
L:L:Y10 R:R:L199 4.69 0 No No 0 7 0 1
R:R:M219 R:R:Q223 5.44 0 No Yes 5 7 2 1
R:R:F222 R:R:Q223 8.2 0 Yes Yes 7 7 1 1
L:L:D3 R:R:F222 4.78 0 Yes Yes 0 7 0 1
R:R:Q223 R:R:W273 5.48 7 Yes No 7 8 1 2
R:R:I297 R:R:Q223 5.49 7 No Yes 7 7 2 1
L:L:H1 R:R:Q223 8.65 0 Yes Yes 0 7 0 1
R:R:F230 R:R:V226 3.93 0 Yes No 8 5 2 1
L:L:H1 R:R:V226 12.45 0 Yes No 0 5 0 1
R:R:F230 R:R:Y354 10.32 0 Yes Yes 8 8 2 2
R:R:I297 R:R:W273 18.79 7 No No 7 8 2 2
L:L:T7 R:R:D287 5.78 0 No No 0 5 0 1
L:L:S11 R:R:D287 7.36 0 No No 0 5 0 1
L:L:D8 R:R:T288 5.78 0 No No 0 4 0 1
R:R:I289 R:R:W294 10.57 0 No No 8 7 1 2
L:L:D8 R:R:I289 7 0 No No 0 8 0 1
R:R:I297 R:R:W294 3.52 7 No No 7 7 2 2
R:R:E373 R:R:Y354 7.86 1 Yes Yes 7 8 1 2
R:R:F357 R:R:F360 7.5 1 Yes Yes 6 5 2 2
R:R:F357 R:R:K369 6.2 1 Yes Yes 6 8 2 1
R:R:F357 R:R:F372 5.36 1 Yes Yes 6 4 2 2
R:R:E373 R:R:F357 5.83 1 Yes Yes 7 6 1 2
R:R:F360 R:R:K369 4.96 1 Yes Yes 5 8 2 1
R:R:D362 R:R:K369 8.3 0 No Yes 4 8 1 1
L:L:I5 R:R:D362 12.59 0 No No 0 4 0 1
L:L:S2 R:R:K369 4.59 0 No Yes 0 8 0 1
L:L:F6 R:R:M370 6.22 3 Yes No 0 6 0 1
R:R:E373 R:R:F372 4.66 1 Yes Yes 7 4 1 2
L:L:S2 R:R:E373 7.19 0 No Yes 0 7 0 1
L:L:D3 R:R:L374 5.43 0 Yes No 0 7 0 1
L:L:F6 R:R:L374 3.65 3 Yes No 0 7 0 1
R:R:T147 R:R:Y146 2.5 0 No Yes 7 8 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 6VN7_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.18
Number of Linked Nodes 258
Number of Links 267
Number of Hubs 34
Number of Links mediated by Hubs 123
Number of Communities 8
Number of Nodes involved in Communities 39
Number of Links involved in Communities 46
Path Summary
Number Of Nodes in MetaPath 50
Number Of Links MetaPath 49
Number of Shortest Paths 38534
Length Of Smallest Path 3
Average Path Length 12.9296
Length of Longest Path 29
Minimum Path Strength 0.97
Average Path Strength 6.49112
Maximum Path Strength 25.92
Minimum Path Correlation 0.7
Average Path Correlation 0.938799
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.84615
Average % Of Corr. Nodes 56.9485
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.9611
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • cell population proliferation   • positive regulation of cell population proliferation   • regulation of cell population proliferation   • positive regulation of biological process   • positive regulation of cellular process   • cell surface receptor signaling pathway   • G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger   • protein-containing complex   • receptor complex   • cell periphery   • cellular anatomical structure   • plasma membrane   • membrane   • protein binding   • binding   • signaling receptor binding   • molecular transducer activity   • molecular function activator activity   • signaling receptor activity   • neuropeptide activity   • signaling receptor activator activity   • hormone activity   • molecular function regulator activity   • neuropeptide hormone activity   • signaling receptor regulator activity   • receptor ligand activity   • peptide hormone receptor binding   • hormone receptor binding   • vasoactive intestinal polypeptide receptor binding   • type 2 vasoactive intestinal polypeptide receptor binding   • G protein-coupled receptor binding   • neuropeptide receptor binding   • pituitary adenylate cyclase activating polypeptide activity   • type 1 vasoactive intestinal polypeptide receptor binding   • neuropeptide signaling pathway   • chemokine (C-C motif) ligand 5 production   • multicellular organismal process   • positive regulation of chemokine (C-C motif) ligand 5 production   • positive regulation of macromolecule biosynthetic process   • positive regulation of metabolic process   • positive regulation of biosynthetic process   • cytokine production   • regulation of cytokine production   • regulation of multicellular organismal process   • positive regulation of macromolecule metabolic process   • regulation of biosynthetic process   • regulation of macromolecule metabolic process   • gene expression   • macromolecule biosynthetic process   • regulation of chemokine production   • regulation of gene expression   • biosynthetic process   • positive regulation of gene expression   • chemokine production   • positive regulation of chemokine production   • positive regulation of multicellular organismal process   • regulation of chemokine (C-C motif) ligand 5 production   • metabolic process   • regulation of macromolecule biosynthetic process   • macromolecule metabolic process   • positive regulation of cytokine production   • regulation of metabolic process   • positive regulation of cytosolic calcium ion concentration   • regulation of biological quality   • positive regulation of cell communication   • positive regulation of signal transduction   • regulation of signal transduction   • intracellular signal transduction   • positive regulation of response to stimulus   • positive regulation of ERK1 and ERK2 cascade   • regulation of intracellular signal transduction   • intracellular signaling cassette   • regulation of signaling   • positive regulation of MAPK cascade   • positive regulation of intracellular signal transduction   • regulation of MAPK cascade   • regulation of response to stimulus   • MAPK cascade   • regulation of cell communication   • ERK1 and ERK2 cascade   • regulation of ERK1 and ERK2 cascade   • positive regulation of signaling   • multi-multicellular organism process   • reproductive process   • female pregnancy   • multi-organism reproductive process   • positive regulation of molecular function   • regulation of molecular function   • positive regulation of hydrolase activity   • regulation of catalytic activity   • regulation of hydrolase activity   • positive regulation of catalytic activity   • regulation of GTPase activity   • positive regulation of GTPase activity   • negative regulation of cellular process   • negative regulation of biological process   • negative regulation of cell cycle   • cell cycle   • regulation of cell cycle   • cell-cell signaling   • homeostatic process   • adaptive thermogenesis   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • regulation of G protein-coupled receptor signaling pathway   • protein localization   • regulation of localization   • cellular localization   • regulation of protein localization   • localization   • regulation of cellular localization   • cellular macromolecule localization   • macromolecule localization   • positive regulation of adenylate cyclase activity   • positive regulation of cyclase activity   • activation of adenylate cyclase activity   • regulation of adenylate cyclase activity   • positive regulation of lyase activity   • regulation of protein modification process   • positive regulation of phosphorylation   • regulation of protein phosphorylation   • positive regulation of protein metabolic process   • regulation of transferase activity   • positive regulation of phosphate metabolic process   • regulation of primary metabolic process   • positive regulation of protein modification process   • regulation of phosphate metabolic process   • phosphate-containing compound metabolic process   • protein metabolic process   • positive regulation of protein kinase activity   • phosphorus metabolic process   • protein modification process   • positive regulation of protein phosphorylation   • protein phosphorylation   • positive regulation of transferase activity   • positive regulation of phosphorus metabolic process   • phosphorylation   • regulation of protein metabolic process   • primary metabolic process   • regulation of protein kinase activity   • positive regulation of kinase activity   • regulation of kinase activity   • macromolecule modification   • regulation of phosphorylation   • regulation of phosphorus metabolic process   • regulation of hormone secretion   • nitrogen compound transport   • regulation of peptide secretion   • transport   • positive regulation of secretion by cell   • hormone secretion   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • positive regulation of hormone secretion   • positive regulation of secretion   • amide transport   • signal release   • regulation of peptide hormone secretion   • positive regulation of peptide secretion   • growth hormone secretion   • regulation of transport   • secretion   • regulation of hormone levels   • regulation of growth hormone secretion   • regulation of peptide transport   • positive regulation of peptide hormone secretion   • export from cell   • establishment of localization   • regulation of secretion   • peptide transport   • positive regulation of growth hormone secretion   • positive regulation of transport   • peptide hormone secretion   • hormone transport   • positive regulation of DNA-templated transcription   • RNA metabolic process   • nucleobase-containing compound metabolic process   • RNA biosynthetic process   • nucleic acid biosynthetic process   • DNA-templated transcription   • regulation of RNA metabolic process   • transcription by RNA polymerase II   • regulation of nucleobase-containing compound metabolic process   • regulation of RNA biosynthetic process   • regulation of transcription by RNA polymerase II   • positive regulation of nucleobase-containing compound metabolic process   • positive regulation of transcription by RNA polymerase II   • nucleobase-containing compound biosynthetic process   • nucleic acid metabolic process   • positive regulation of RNA metabolic process   • positive regulation of RNA biosynthetic process   • regulation of DNA-templated transcription   • establishment of protein localization   • protein localization to extracellular region   • establishment of protein localization to extracellular region   • protein secretion   • protein transport   • insulin secretion   • developmental process   • plasma membrane bounded cell projection organization   • cellular developmental process   • cell projection organization   • cell development   • neuron projection development   • nervous system development   • cellular component organization   • generation of neurons   • neurogenesis   • multicellular organism development   • neuron differentiation   • cell differentiation   • neuron development   • anatomical structure development   • cellular component organization or biogenesis   • system development   • somatodendritic compartment   • cell body   • perikaryon   • neuronal cell body   • cell projection   • neuron projection   • plasma membrane bounded cell projection   • extracellular region   • extracellular space   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • D1 dopamine receptor binding   • dopamine receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • enzyme regulator activity   • phosphorus-oxygen lyase activity   • cyclase regulator activity   • enzyme activator activity   • cyclase activator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • adenylate cyclase activator activity   • adenylate cyclase activity   • cation binding   • metal ion binding   • epithelium development   • ectodermal placode morphogenesis   • epidermis development   • molting cycle process   • hair cycle   • animal organ development   • hair follicle placode formation   • tissue development   • ectodermal placode formation   • anatomical structure morphogenesis   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • anatomical structure formation involved in morphogenesis   • ectodermal placode development   • hair cycle process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of smell   • cellular response to nitrogen compound   • response to endogenous stimulus   • response to peptide hormone   • cellular response to peptide hormone stimulus   • response to oxygen-containing compound   • response to nitrogen compound   • response to glucagon   • cellular response to oxygen-containing compound   • cellular response to glucagon stimulus   • cellular response to endogenous stimulus   • cellular response to chemical stimulus   • response to hormone   • response to chemical   • cellular response to hormone stimulus   • skeletal system development   • bone development   • regulation of body fluid levels   • wound healing   • homotypic cell-cell adhesion   • cell activation   • hemostasis   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • response to stress   • coagulation   • response to wounding   • platelet activation   • response to fluid shear stress   • vascular endothelial cell response to laminar fluid shear stress   • response to laminar fluid shear stress   • cellular response to stress   • cellular response to laminar fluid shear stress   • vascular endothelial cell response to fluid shear stress   • cellular response to fluid shear stress   • cognition   • developmental growth   • growth   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • regulation of protein secretion   • regulation of establishment of protein localization   • regulation of protein transport   • regulation of insulin secretion   • adenylate cyclase-activating adrenergic receptor signaling pathway   • adrenergic receptor signaling pathway   • establishment of localization in cell   • intracellular transport   • regulation of defense response   • regulation of response to external stimulus   • negative regulation of inflammatory response   • inflammatory response to antigenic stimulus   • regulation of response to stress   • regulation of immune system process   • negative regulation of inflammatory response to antigenic stimulus   • defense response   • immune response   • negative regulation of response to stimulus   • negative regulation of immune response   • regulation of inflammatory response to antigenic stimulus   • response to external stimulus   • regulation of inflammatory response   • negative regulation of immune system process   • immune system process   • negative regulation of response to external stimulus   • negative regulation of defense response   • regulation of immune response   • inflammatory response   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • cellular response to monoamine stimulus   • renal system process   • chemical homeostasis   • multicellular organismal-level water homeostasis   • multicellular organismal-level chemical homeostasis   • renal water homeostasis   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • organelle   • vesicle   • extracellular membrane-bounded organelle   • intracellular anatomical structure   • cytoplasm   • cytosol   • Golgi apparatus subcompartment   • Golgi apparatus   • organelle subcompartment   • trans-Golgi network membrane   • intracellular membrane-bounded organelle   • endomembrane system   • intracellular organelle   • trans-Golgi network   • organelle membrane   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • sensory perception of taste   • sensory organ development   • eye development   • retina development in camera-type eye   • visual system development   • camera-type eye development   • sensory system development   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • phospholipase C-activating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP32241
Sequence
>6VN7_nogp_Chain_R
ASLDEQQTM FYGSVKTGY TIGYGLSLA TLLVATAIL SLFRKLHCT 
RNYIHMHLF ISFILRAAA VFIKDLALF DSVGCKAAM VFFQYCVMA 
NFFWLLVEG LYLYTLLAV SFFSERKYF WGYILIGWG VPSTFTMVW 
TIARIHFED YGCWDTINS SLWWIIKGP ILTSILVNF ILFICIIRI 
LLQKLRPPP YSRLARSTL LLIPLFGVH YIMFAFFPD NFKPEVKMV 
FELVVGSFQ GFVVAILYC FLNGEVQAE LRRKWRRWH LQ


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8E3ZB1PeptideVIP and PACAPVPAC1Homo sapiensVIP-Gs/β1/γ22.72022-11-2310.1038/s41467-022-34629-3
8E3Z (No Gprot) B1PeptideVIP and PACAPVPAC1Homo sapiensVIP-2.72022-11-2310.1038/s41467-022-34629-3
8E3YB1PeptideVIP and PACAPVPAC1Homo sapiensPACAP27-Gs/β1/γ22.32022-11-2310.1038/s41467-022-34629-3
8E3Y (No Gprot) B1PeptideVIP and PACAPVPAC1Homo sapiensPACAP27-2.32022-11-2310.1038/s41467-022-34629-3
6VN7B1PeptideVIP and PACAPVPAC1Homo sapiensPACAP-Gs/β1/γ23.22020-09-0210.1038/s41467-020-17933-8
6VN7 (No Gprot) B1PeptideVIP and PACAPVPAC1Homo sapiensPACAP-3.22020-09-0210.1038/s41467-020-17933-8




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 6VN7_nogp.zip



You can click to copy the link of this page to easily come back here later

or use this QR code to link and share this page.



You can also  read or  download a guide explaining the meaning of all files and numerical data.