Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:R1 11.4425430
2L:L:F5 8.57630
3L:L:P7 8.45510
4L:L:F8 11.806510
5R:R:L56 4.448513
6R:R:F68 6.7975407
7R:R:N75 6.48479
8R:R:V78 5.4725428
9R:R:V81 4.878528
10R:R:F82 7.1325427
11R:R:H85 5.3475485
12R:R:V91 3.3725496
13R:R:Y95 5.828597
14R:R:D103 6.67579
15R:R:W123 8.015658
16R:R:F125 12.23407
17R:R:N134 10.3125455
18R:R:N140 5.3525408
19R:R:Y142 5.784107
20R:R:W146 4.865717105
21R:R:F147 7.7275468
22R:R:Y156 6.8285118
23R:R:W182 5.032569
24R:R:F195 7.84754124
25R:R:R196 12.255454
26R:R:Y201 8.4531
27R:R:E204 6.575432
28R:R:C211 7.025459
29R:R:Y215 8.104505
30R:R:W220 5.0354122
31R:R:F233 8.07408
32R:R:L237 4.495406
33R:R:L251 3.97408
34R:R:W283 7.834509
35R:R:F286 5.3125416
36R:R:T290 6.2475405
37R:R:S318 5.645415
38R:R:F319 8.22333615
39R:R:Y332 6.822549
40R:R:F339 7.43833628
41R:R:K342 6.44485
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:F5 R:R:F121 21.95994.29YesNo004
2R:R:E204 R:R:F121 13.73755.83YesNo024
3L:L:F5 R:R:Y201 10.950317.54YesYes301
4R:R:E204 R:R:Y201 24.54426.73YesYes321
5L:L:F5 L:L:R1 10.82048.55YesYes300
6L:L:R1 R:R:E204 27.167310.47YesYes302
7R:R:E204 R:R:W55 67.72563.27YesNo024
8R:R:R308 R:R:W55 94.82683NoNo014
9R:R:R308 R:R:V312 97.47495.23NoNo012
10R:R:L56 R:R:V312 1004.47YesNo032
11R:R:L56 R:R:Q60 56.51096.65YesNo135
12R:R:F319 R:R:Q60 57.66648.2YesNo155
13L:L:P7 R:R:F319 78.10394.33YesYes105
14L:L:P7 R:R:W113 51.51328.11YesNo006
15R:R:N134 R:R:W113 31.32189.04YesNo056
16R:R:N134 R:R:R196 11.228324.1YesYes554
17R:R:I213 R:R:R196 11.725213.78NoYes044
18R:R:I213 R:R:Y215 10.129918.13NoYes045
19R:R:F121 R:R:N57 13.83556.04NoNo045
20R:R:N57 R:R:W55 24.610312.43NoNo054
21R:R:L56 R:R:Q315 56.48823.99YesNo134
22R:R:F319 R:R:Q315 57.63675.86YesNo154
23L:L:F8 L:L:P7 75.166417.34YesYes100
24L:L:F8 R:R:F286 52.29498.57YesYes106
25R:R:F286 R:R:T290 38.50273.89YesYes065
26L:L:R9 R:R:T290 24.96356.47NoYes005
27R:R:D293 R:R:R297 16.210111.91NoNo043
28R:R:F319 R:R:Y322 51.492711.35YesNo057
29L:L:F8 R:R:Y322 55.854614.44YesNo007
30L:L:P7 R:R:S318 23.55297.13YesYes105
31R:R:F286 R:R:S318 23.53925.28YesYes165
32R:R:N225 R:R:T290 15.47634.39NoYes055
33L:L:F8 R:R:L141 95.820413.4YesNo007
34L:L:R9 R:R:T314 16.29911.64NoNo005
35R:R:L110 R:R:Y322 14.05428.21NoNo087
36R:R:F68 R:R:L110 13.15183.65YesNo078
37R:R:L141 R:R:W283 95.44444.56NoYes079
38R:R:N324 R:R:W283 61.24211.3NoYes099
39R:R:N324 R:R:N328 58.242913.62NoNo099
40R:R:N328 R:R:Y332 21.34236.98NoYes499
41R:R:L148 R:R:N328 36.13726.87NoNo489
42R:R:L148 R:R:L99 37.42945.54NoNo089
43R:R:D103 R:R:L99 36.54976.79YesNo099
44R:R:D103 R:R:N75 26.51096.73YesYes799
45R:R:A100 R:R:N75 23.75574.69NoYes089
46R:R:A100 R:R:V78 22.79853.39NoYes088
47R:R:F82 R:R:V78 14.04063.93YesYes278
48R:R:R155 R:R:Y332 17.81457.2NoYes099
49R:R:R155 R:R:V151 16.92347.85NoNo099
50R:R:V151 R:R:Y95 16.01872.52NoYes097
51R:R:I145 R:R:W283 46.03699.4NoYes089
52R:R:I145 R:R:P236 44.36423.39NoNo089
53R:R:M149 R:R:P236 42.67325.03NoNo079
54R:R:M149 R:R:W146 24.84283.49NoYes075
55R:R:T185 R:R:W146 10.21883.64NoYes085
56R:R:T116 R:R:W113 19.54883.64NoNo056
57R:R:T116 R:R:W123 18.7428.49NoYes058
58R:R:F125 R:R:W123 18.354619.04YesYes078
59R:R:N134 R:R:W123 19.4853.39YesYes558
60R:R:G126 R:R:W123 18.35462.81NoYes088
61R:R:G126 R:R:M198 16.33323.49NoNo086
62R:R:M149 R:R:V239 19.12727.61NoNo076
63R:R:I153 R:R:V239 18.15634.61NoNo066
64R:R:C243 R:R:I153 17.18093.27NoNo076
65R:R:C243 R:R:Y156 14.22744.03NoYes078
66R:R:F279 R:R:W283 20.973110.02NoYes099
67R:R:F279 R:R:L237 20.22113.65NoYes096
68R:R:I280 R:R:L237 34.6242.85NoYes066
69R:R:I280 R:R:L276 50.53784.28NoNo067
70R:R:L276 R:R:T244 47.15365.9NoNo078
71R:R:M248 R:R:T244 40.70424.52NoNo048
72R:R:M248 R:R:T269 33.91296.02NoNo046
73R:R:L251 R:R:T269 30.51055.9YesNo086
74R:R:F286 R:R:Q287 50.23473.51YesNo068
75R:R:F233 R:R:Q287 52.711915.23YesNo088
76R:R:F233 R:R:L237 27.03058.53YesYes086
77R:R:F233 R:R:L284 24.69464.87YesNo085
78R:R:I280 R:R:L284 20.99592.85NoNo065
79R:R:W220 R:R:Y215 13.17913.86YesYes025
80L:L:F5 R:R:V212 21.88473.93YesNo304
81R:R:K199 R:R:V212 13.67827.59NoNo044
82R:R:N229 R:R:Q287 13.13816.6NoNo058
83R:R:N229 R:R:T290 12.381510.24NoYes055
84R:R:E265 R:R:L251 13.74433.98NoYes078
85R:R:S289 R:R:T314 11.92116.4NoNo055
86R:R:I313 R:R:S289 10.44674.64NoNo055
87L:L:R1 R:R:D311 13.890222.63YesNo003
88R:R:D311 R:R:E307 11.12813.9NoNo033
89L:L:F5 R:R:A210 10.94585.55YesNo002
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:R1 R:R:Y201 4.12 3 Yes Yes 0 1 0 1
L:L:R1 R:R:E204 10.47 3 Yes Yes 0 2 0 1
L:L:R1 R:R:D311 22.63 3 Yes No 0 3 0 1
L:L:P2 R:R:Y201 5.56 3 No Yes 0 1 0 1
L:L:P2 R:R:V212 3.53 3 No No 0 4 0 1
L:L:P3 R:R:Y215 5.56 0 No Yes 0 5 0 1
L:L:P3 R:R:R297 7.21 0 No No 0 3 0 1
L:L:G4 R:R:I213 3.53 0 No No 0 4 0 1
L:L:F5 R:R:F121 4.29 3 Yes No 0 4 0 1
L:L:F5 R:R:Y201 17.54 3 Yes Yes 0 1 0 1
L:L:F5 R:R:A210 5.55 3 Yes No 0 2 0 1
L:L:F5 R:R:V212 3.93 3 Yes No 0 4 0 1
L:L:S6 R:R:S318 4.89 1 No Yes 0 5 0 1
L:L:P7 R:R:W113 8.11 1 Yes No 0 6 0 1
L:L:P7 R:R:S318 7.13 1 Yes Yes 0 5 0 1
L:L:P7 R:R:F319 4.33 1 Yes Yes 0 5 0 1
L:L:F8 R:R:L141 13.4 1 Yes No 0 7 0 1
L:L:F8 R:R:F286 8.57 1 Yes Yes 0 6 0 1
L:L:F8 R:R:S318 5.28 1 Yes Yes 0 5 0 1
L:L:F8 R:R:Y322 14.44 1 Yes No 0 7 0 1
L:L:R9 R:R:T290 6.47 0 No Yes 0 5 0 1
L:L:R9 R:R:D293 15.48 0 No No 0 4 0 1
L:L:R9 R:R:T314 11.64 0 No No 0 5 0 1
R:R:N57 R:R:W55 12.43 0 No No 5 4 2 2
R:R:E204 R:R:W55 3.27 3 Yes No 2 4 1 2
R:R:F121 R:R:N57 6.04 0 No No 4 5 1 2
R:R:Q315 R:R:Q60 14.08 1 No No 4 5 2 2
R:R:F319 R:R:Q60 8.2 1 Yes No 5 5 1 2
R:R:F319 R:R:L64 15.83 1 Yes No 5 6 1 2
R:R:L110 R:R:Y322 8.21 0 No No 8 7 2 1
R:R:T116 R:R:W113 3.64 0 No No 5 6 2 1
R:R:N134 R:R:W113 9.04 5 Yes No 5 6 2 1
R:R:F319 R:R:I117 3.77 1 Yes No 5 5 1 2
R:R:E204 R:R:F121 5.83 3 Yes No 2 4 1 1
R:R:N134 R:R:R196 24.1 5 Yes Yes 5 4 2 2
R:R:L141 R:R:W283 4.56 0 No Yes 7 9 1 2
R:R:I213 R:R:R196 13.78 0 No Yes 4 4 1 2
R:R:K199 R:R:V212 7.59 0 No No 4 4 2 1
R:R:D203 R:R:Y201 8.05 0 No Yes 2 1 2 1
R:R:E204 R:R:Y201 6.73 3 Yes Yes 2 1 1 1
R:R:I213 R:R:Y215 18.13 0 No Yes 4 5 1 1
R:R:W220 R:R:Y215 3.86 12 Yes Yes 2 5 2 1
R:R:E221 R:R:Y215 6.73 0 No Yes 4 5 2 1
R:R:T224 R:R:Y215 6.24 0 No Yes 5 5 2 1
R:R:E221 R:R:R297 11.63 0 No No 4 3 2 1
R:R:N225 R:R:T290 4.39 0 No Yes 5 5 2 1
R:R:D293 R:R:N225 4.04 0 No No 4 5 1 2
R:R:N229 R:R:Q287 6.6 0 No No 5 8 2 2
R:R:N229 R:R:T290 10.24 0 No Yes 5 5 2 1
R:R:F286 R:R:Q287 3.51 1 Yes No 6 8 1 2
R:R:F286 R:R:T290 3.89 1 Yes Yes 6 5 1 1
R:R:F286 R:R:S318 5.28 1 Yes Yes 6 5 1 1
R:R:S289 R:R:T314 6.4 0 No No 5 5 2 1
R:R:D293 R:R:R297 11.91 0 No No 4 3 1 1
R:R:D311 R:R:E307 3.9 0 No No 3 3 1 2
R:R:F319 R:R:Q315 5.86 1 Yes No 5 4 1 2
R:R:F319 R:R:Y322 11.35 1 Yes No 5 7 1 1
R:R:I310 R:R:T314 1.52 0 No No 5 5 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7F2O_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.27
Number of Linked Nodes 279
Number of Links 315
Number of Hubs 41
Number of Links mediated by Hubs 157
Number of Communities 13
Number of Nodes involved in Communities 57
Number of Links involved in Communities 74
Path Summary
Number Of Nodes in MetaPath 90
Number Of Links MetaPath 89
Number of Shortest Paths 103021
Length Of Smallest Path 3
Average Path Length 15.9545
Length of Longest Path 31
Minimum Path Strength 1.16
Average Path Strength 7.0686
Maximum Path Strength 18.94
Minimum Path Correlation 0.7
Average Path Correlation 0.922002
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 38.8774
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 38.9055
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP30411
Sequence
>7F2O_nogp_Chain_R
WLNTIQPPF LWVLFVLAT LENIFVLSV FCLHKSSCT VAEIYLGNL 
AAADLILAC GLPFWAITI SNNFDWLFG ETLCRVVNA IISMNLYSS 
IWFLMLVSI DRYLALVKT MSMGRMRGV RWAKLYSLV IWGCTLLLS 
SPMLVFRTM KEYSDEGHN VTACVISYP SLIWEVFTN MLLNVVGFL 
LPLSVITFC TMQIMQVLR NNEMQQTER RATVLVLVV LLLFIICWL 
PFQISTFLD TLHRLGILS SCQDERIID VITQIASFM AYSNSCLNP 
LVYVIVGKR FRKKSWEV


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7F6IAPeptideBradykininBK2Homo sapiensKallidin-Gq/β1/γ22.82022-01-0510.1038/s41467-022-28399-1
7F6I (No Gprot) APeptideBradykininBK2Homo sapiensKallidin-2.82022-01-0510.1038/s41467-022-28399-1
7F6HAPeptideBradykininBK2Homo sapiensBradykinin-Gq/β1/γ22.92022-01-0510.1038/s41467-022-28399-1
7F6H (No Gprot) APeptideBradykininBK2Homo sapiensBradykinin-2.92022-01-0510.1038/s41467-022-28399-1
7F2OAPeptideBradykininBK2Homo sapiensBradykinin-chim(NtGi1-Gs-CtGq)/β1/γ22.92021-10-1310.1038/s41594-021-00645-y
7F2O (No Gprot) APeptideBradykininBK2Homo sapiensBradykinin-2.92021-10-1310.1038/s41594-021-00645-y




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7F2O_nogp.zip



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