Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F12 6.38451
2R:R:Y17 6.696597
3R:R:P19 5.83497
4R:R:Y26 4.9654136
5R:R:I29 5.685404
6R:R:Y30 5.045467
7R:R:F38 5.50167607
8R:R:F55 9.9675416
9R:R:R58 4.95571719
10R:R:L64 2.9354115
11R:R:W70 5.3575474
12R:R:F81 6.188579
13R:R:N84 3.744149
14R:R:Q85 10.3475475
15R:R:L88 2.9625409
16R:R:I91 4.3325407
17R:R:H94 4.474518
18R:R:Y98 10.7875416
19R:R:F99 4.656515
20R:R:Y101 4.6725406
21R:R:V109 2.6075405
22R:R:F116 7.176107
23R:R:F119 7.7125403
24R:R:V125 3.3654174
25R:R:Y128 4.76408
26R:R:V136 1.7825405
27R:R:F148 3.54157
28R:R:Q149 5.2025409
29R:R:I150 3.78408
30R:R:F154 5.15409
31R:R:F159 4.2175401
32R:R:T177 4.68754188
33R:R:Y181 6.27507
34R:R:Y203 3.3225405
35R:R:I215 3.2054198
36R:R:F217 4.8025406
37R:R:M218 5.05508
38R:R:L222 4.0525409
39R:R:F241 7.14439
40R:R:L247 4.4925439
41R:R:P258 3.196676219
42R:R:F262 3.978336197
43R:R:Y266 4.0075406
44R:R:T278 1.54405
45R:R:L287 3.234128
46R:R:S293 2.9854149
47R:R:W295 5.17609
48R:R:N300 4.324207
49R:R:N301 4.13754206
50S:S:F12 6.38461
51S:S:Y17 7.3145107
52S:S:P19 5.834107
53S:S:Y26 4.9654226
54S:S:I29 5.685404
55S:S:Y30 5.3925457
56S:S:F38 5.50167607
57S:S:F55 9.9675426
58S:S:R58 4.95571729
59S:S:L64 2.9354125
60S:S:W70 5.3575484
61S:S:F81 6.188589
62S:S:N84 3.744239
63S:S:Q85 10.3475485
64S:S:L88 2.9625409
65S:S:I91 4.3325407
66S:S:H94 4.474528
67S:S:Y98 10.7875426
68S:S:F99 4.406525
69S:S:Y101 4.6725406
70S:S:V109 2.6075405
71S:S:F116 6.45333697
72S:S:F119 7.7125403
73S:S:V125 3.3654264
74S:S:Y128 5.605408
75S:S:V136 1.7825405
76S:S:F148 3.54247
77S:S:Q149 5.2025409
78S:S:I150 3.78408
79S:S:F154 5.15409
80S:S:F159 4.2175401
81S:S:T177 4.68754278
82S:S:Y181 6.27507
83S:S:Y203 3.3225405
84S:S:I215 3.2054288
85S:S:F217 4.8025406
86S:S:M218 5.05508
87S:S:L222 4.0525409
88S:S:F241 7.41449
89S:S:L247 4.4925449
90S:S:P258 3.196676309
91S:S:F262 3.978336287
92S:S:Y266 4.0075406
93S:S:T278 1.54405
94S:S:L287 3.234118
95S:S:S293 2.9854239
96S:S:W295 5.17609
97S:S:N300 4.324297
98S:S:N301 4.13754296
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F116 R:R:T114 28.93773.89YesNo077
2R:R:T114 S:S:F38 28.71212.59NoYes077
3S:S:F38 S:S:L41 25.89192.44YesNo075
4R:R:V109 S:S:L41 11.98822.98YesNo055
5R:R:L41 R:R:V109 14.44962.98NoYes055
6R:R:F38 R:R:L41 26.13032.44YesNo075
7S:S:L41 S:S:V109 14.31952.98NoYes055
8R:R:L41 S:S:V109 12.06052.98NoYes055
9R:R:F38 S:S:T114 29.3682.59YesNo077
10S:S:F116 S:S:T114 29.59763.89YesNo077
11S:S:F116 S:S:I29 39.38387.54YesYes074
12R:R:F12 S:S:I29 40.91153.77YesYes014
13R:R:F12 S:S:P117 44.18297.22YesNo014
14R:R:F116 R:R:I29 38.53927.54YesYes074
15R:R:I29 S:S:F12 40.11033.77YesYes041
16R:R:P117 S:S:F12 43.48137.22NoYes041
17R:R:P117 R:R:V196 43.89791.77NoNo041
18R:R:V196 R:R:Y111 47.25042.52NoNo015
19R:R:Y106 R:R:Y111 47.04015.96NoNo1655
20R:R:Y106 R:R:Y128 49.74953.97NoYes058
21R:R:Y101 R:R:Y128 55.93357.94YesYes068
22R:R:Y101 R:R:Y98 57.60016.95YesYes066
23S:S:P117 S:S:V196 44.57711.77NoNo041
24S:S:V196 S:S:Y111 47.74982.52NoNo015
25S:S:Y106 S:S:Y111 47.54584.96NoNo2555
26S:S:Y106 S:S:Y128 50.28743.97NoYes058
27S:S:Y101 S:S:Y128 51.56797.94YesYes068
28S:S:Y101 S:S:Y98 53.33726.95YesYes066
29S:S:F55 S:S:Y98 54.654625.79YesYes266
30R:R:F55 R:R:Y98 58.840425.79YesYes166
31R:R:F55 R:R:R58 57.40428.55YesYes169
32R:R:I91 R:R:R58 54.25813.76YesYes079
33R:R:R58 R:R:T282 17.06112.59YesNo095
34R:R:L283 R:R:R58 35.2597.29NoYes089
35R:R:A62 R:R:I91 28.25623.25NoYes087
36R:R:A62 R:R:L88 28.92333.15NoYes089
37R:R:I91 R:R:V286 28.07234.61YesNo078
38R:R:L88 R:R:V286 30.84522.98YesNo098
39R:R:L283 R:R:L287 35.47734.15NoYes088
40R:R:L287 S:S:L64 35.13622.77YesYes1285
41S:S:L64 S:S:V68 85.21241.49YesNo057
42R:R:V68 S:S:V68 85.18036.41NoNo077
43R:R:L64 R:R:V68 85.25741.49YesNo057
44R:R:L64 S:S:T65 51.10145.9YesNo1157
45R:R:L64 S:S:L287 34.04432.77YesYes1158
46R:R:L66 R:R:L88 96.17392.77NoYes059
47R:R:L66 R:R:Q85 93.17066.65NoYes755
48R:R:M69 R:R:Q85 91.528912.23NoYes785
49R:R:M69 R:R:P290 91.48393.35NoNo089
50R:R:N84 R:R:P290 90.96853.26YesNo099
51R:R:N84 R:R:S293 82.87152.98YesYes1499
52R:R:H94 R:R:Q135 12.60326.18YesNo086
53R:R:Q135 R:R:Y181 11.91442.25NoYes067
54R:R:F262 R:R:T282 14.40222.59YesNo075
55R:R:Q149 R:R:S293 82.22124.33YesYes099
56R:R:M218 R:R:Q149 52.21978.16YesYes089
57R:R:Q149 R:R:S292 30.31294.33YesNo099
58R:R:I150 R:R:M218 21.87954.37YesYes088
59R:R:I150 R:R:V221 10.63154.61YesNo087
60R:R:F217 R:R:L166 13.30724.87YesNo067
61R:R:L222 R:R:M218 24.46775.65YesYes098
62R:R:L222 R:R:W295 46.02534.56YesYes099
63R:R:K225 R:R:W295 19.931110.44NoYes099
64R:R:L222 R:R:S292 24.16593YesNo099
65R:R:L248 R:R:W295 13.32659.11NoYes089
66R:R:F244 R:R:L248 10.65727.31NoNo398
67R:R:L255 R:R:P258 11.02653.28NoYes099
68S:S:F55 S:S:R58 52.068.55YesYes269
69S:S:I91 S:S:R58 56.52843.76YesYes079
70S:S:R58 S:S:T282 17.15182.59YesNo095
71S:S:L283 S:S:L287 34.39524.15NoYes088
72S:S:L88 S:S:T65 51.37522.95YesNo097
73S:S:A62 S:S:L88 30.09143.15NoYes089
74S:S:L66 S:S:L88 1002.77NoYes059
75S:S:L66 S:S:Q85 97.03936.65NoYes855
76S:S:M69 S:S:Q85 95.432112.23NoYes885
77S:S:M69 S:S:P290 95.42643.35NoNo089
78S:S:N84 S:S:P290 94.92473.26YesNo099
79S:S:N84 S:S:S293 86.9282.98YesYes2399
80S:S:L88 S:S:V286 32.01732.98YesNo098
81S:S:H94 S:S:Q135 20.26036.18YesNo086
82S:S:Q135 S:S:Y181 19.58272.25NoYes067
83S:S:F262 S:S:T282 14.46732.59YesNo075
84S:S:Q149 S:S:S293 86.33074.33YesYes099
85S:S:M218 S:S:Q149 54.18428.16YesYes089
86S:S:Q149 S:S:S292 32.5234.33YesNo099
87S:S:I150 S:S:M218 21.68284.37YesYes088
88S:S:I150 S:S:V221 10.53514.61YesNo087
89S:S:F217 S:S:L166 13.17234.87YesNo067
90S:S:L222 S:S:M218 26.82725.65YesYes098
91S:S:L222 S:S:W295 50.73464.56YesYes099
92S:S:K225 S:S:W295 19.781810.44NoYes099
93S:S:L222 S:S:S292 26.48043YesNo099
94S:S:L226 S:S:W295 11.9933.42NoYes099
95S:S:I249 S:S:L226 10.66682.85NoNo099
96S:S:L248 S:S:W295 13.21419.11NoYes089
97S:S:F244 S:S:L248 10.56737.31NoNo498
98S:S:L255 S:S:P258 10.96223.28NoYes099
99S:S:L283 S:S:R58 34.17527.29NoYes089
100R:R:T65 S:S:L64 49.94145.9NoYes1275
101R:R:L88 R:R:T65 50.18382.95YesNo097
102S:S:A62 S:S:I91 29.41943.25NoYes087
103S:S:I91 S:S:V286 29.23644.61YesNo078
104R:R:H94 R:R:R58 12.52053.39YesYes189
105S:S:H94 S:S:R58 18.76223.39YesYes289
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 7QB9
Class D1
SubFamily Ste2-like
Type STE2
SubType STE2
Species Saccharomyces Cerevisiae
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 3.1
Date 2022-03-16
D.O.I. 10.1038/s41586-022-04498-3
Net Summary
Imin 1.77
Number of Linked Nodes 551
Number of Links 635
Number of Hubs 98
Number of Links mediated by Hubs 370
Number of Communities 30
Number of Nodes involved in Communities 128
Number of Links involved in Communities 150
Path Summary
Number Of Nodes in MetaPath 106
Number Of Links MetaPath 105
Number of Shortest Paths 317429
Length Of Smallest Path 3
Average Path Length 22.3895
Length of Longest Path 41
Minimum Path Strength 1.38
Average Path Strength 5.07521
Maximum Path Strength 21.0967
Minimum Path Correlation 0.7
Average Path Correlation 0.959674
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.33333
Average % Of Corr. Nodes 44.584
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 52.8604
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• cellular response to stimulus   • regulation of cellular process   • sexual reproduction   • response to stimulus   • signaling   • regulation of reproductive process   • reproductive process   • positive regulation of biological process   • regulation of conjugation with cellular fusion   • response to pheromone   • cellular response to pheromone   • cell communication   • positive regulation of conjugation with cellular fusion   • signal transduction   • positive regulation of reproductive process   • pheromone-dependent signal transduction involved in conjugation with cellular fusion   • regulation of biological process   • signal transduction involved in positive regulation of conjugation with cellular fusion   • biological regulation   • conjugation with cellular fusion   • response to pheromone triggering conjugation with cellular fusion   • cellular response to chemical stimulus   • response to chemical   • cellular process   • reproductive process in single-celled organism   • cytogamy   • cell periphery   • cellular anatomical structure   • plasma membrane   • membrane   • G protein-coupled receptor homodimeric complex   • protein-containing complex   • plasma membrane protein complex   • membrane protein complex   • receptor complex   • G protein-coupled receptor dimeric complex   • plasma membrane signaling receptor complex   • G protein-coupled receptor complex
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNAG
PDB ResiduesH:H:?1 H:H:?2 H:H:?3 H:H:?4
Environment DetailsOpen EMBL-EBI Page
CodeNAG
NameN-Acetylglucosamine
SynonymsN-Acetyl-D-glucosamine
Identifier
FormulaC8 H15 N O6
Molecular Weight221.208
SMILES
PubChem24139
Formal Charge0
Total Atoms30
Total Chiral Atoms5
Total Bonds30
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP0CI39
Sequence
>7QB9_Chain_R
APSLSNLFY DPTYNPGQS TINYTSIYG NGSTITFDE LQGLVNSTV 
TQAIMFGVR CGAAALTLI VMWMTSRSR KTPIFIINQ VSLFLIILH 
SALYFKYLL SNYSSVTYA LTGFPQFIS RGDVHVYGA TNIIQVLLV 
ASIETSLVF QIKVIFTGD NFKRIGLML TSISFTLGI ATVTMYFVS 
AVKGMIVTY NDVSATQDK YFNASTILL ASSINFMSF VLVVKLILA 
IRSRRFLGL KQFDSFHIL LIMSCQSLL VPSIIFILA YSLKPNQGT 
DVLTTVATL LAVLSLPLS SMWATAANN AS


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

ChainS
ProteinReceptor
UniProtP0CI39
Sequence
>7QB9_Chain_S
APSLSNLFY DPTYNPGQS TINYTSIYG NGSTITFDE LQGLVNSTV 
TQAIMFGVR CGAAALTLI VMWMTSRSR KTPIFIINQ VSLFLIILH 
SALYFKYLL SNYSSVTYA LTGFPQFIS RGDVHVYGA TNIIQVLLV 
ASIETSLVF QIKVIFTGD NFKRIGLML TSISFTLGI ATVTMYFVS 
AVKGMIVTY NDVSATQDK YFNASTILL ASSINFMSF VLVVKLILA 
IRSRRFLGL KQFDSFHIL LIMSCQSLL VPSIIFILA YSLKPNQGT 
DVLTTVATL LAVLSLPLS SMWATAANN AS


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7QBID1Ste2-likeSTE2STE2Saccharomyces cerevisiaeα-factor mating pheromone--3.462022-03-1610.1038/s41586-022-04498-3
7QBCD1Ste2-likeSTE2STE2Saccharomyces cerevisiaeα-factor mating pheromone--3.532022-03-1610.1038/s41586-022-04498-3
7QB9D1Ste2-likeSTE2STE2Saccharomyces cerevisiae---3.12022-03-1610.1038/s41586-022-04498-3
7QA8D1Ste2-likeSTE2STE2Saccharomyces cerevisiaePeptide--2.72022-03-1610.1038/s41586-022-04498-3
7AD3D1Ste2-likeSTE2STE2Saccharomyces cerevisiaeα-factor mating pheromone-Gi1/STE4/γ23.32020-12-0910.1038/s41586-020-2994-1
7AD3 (No Gprot) D1Ste2-likeSTE2STE2Saccharomyces cerevisiaeα-factor mating pheromone-3.32020-12-0910.1038/s41586-020-2994-1




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 7QB9.zip



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