Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 12.2810
2R:R:I37 3.2925407
3R:R:V48 2.6575409
4R:R:L51 4.845407
5R:R:Y64 4.72167608
6R:R:L76 2.965407
7R:R:Q79 4.445406
8R:R:T103 3.9925414
9R:R:F104 5.595405
10R:R:Y106 7.4175408
11R:R:F107 5.10667616
12R:R:T108 5.39407
13R:R:I116 4.055408
14R:R:Y130 7.11527
15R:R:R134 5.6528
16R:R:E157 4.888515
17R:R:W158 6.46857713
18R:R:R159 6.46403
19R:R:W183 5.8675405
20R:R:F232 6.366516
21R:R:L249 2.5375401
22R:R:Y254 7.934513
23R:R:M258 5.0525414
24R:R:N268 4.0925439
25R:R:Y272 5.7325409
26R:R:F273 4.386507
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:R82 29.738916.28YesNo004
2R:R:Q79 R:R:R82 19.70083.5YesNo064
3R:R:Q79 R:R:S262 16.50692.89YesNo066
4R:R:L76 R:R:S262 16.1953YesNo076
5R:R:L76 R:R:S265 25.60363YesNo079
6R:R:D72 R:R:S265 1007.36NoNo099
7R:R:D72 R:R:N268 73.44354.04NoYes099
8R:R:N264 R:R:N268 19.65464.09NoYes099
9R:R:C228 R:R:N264 14.35251.57NoNo079
10R:R:C228 R:R:L260 10.76011.59NoNo077
11R:R:M258 R:R:R82 15.64633.72YesNo044
12R:R:M102 R:R:M258 33.56824.33NoYes044
13R:R:F75 R:R:M102 29.55416.22NoNo064
14R:R:F75 R:R:S265 89.5466.61NoNo069
15L:L:?1 R:R:Y254 30.143219.64YesYes103
16R:R:M258 R:R:Y254 15.35757.18YesYes143
17L:L:?1 R:R:W158 29.42717.63YesYes103
18R:R:F232 R:R:W158 23.92863.01YesYes163
19R:R:F232 R:R:S261 61.06045.28YesNo068
20R:R:F75 R:R:S261 60.81215.28NoNo068
21R:R:F232 R:R:Y254 20.46323.09YesYes163
22R:R:F78 R:R:M102 13.86747.46NoNo064
23R:R:F78 R:R:I81 11.31451.26NoNo065
24R:R:G41 R:R:L76 10.0671.71NoYes097
25R:R:D72 R:R:N45 36.86615.39NoNo099
26R:R:N45 R:R:P269 35.22588.15NoNo099
27R:R:P269 R:R:V48 33.5741.77NoYes099
28R:R:F273 R:R:V48 28.54923.93YesYes079
29R:R:F273 R:R:L52 12.84517.31YesNo077
30R:R:L113 R:R:N268 48.43482.75NoYes399
31R:R:L113 R:R:Y272 47.18155.86NoYes099
32R:R:I116 R:R:Y272 38.24656.04YesYes089
33R:R:I116 R:R:Y64 33.77043.63YesYes088
34R:R:E119 R:R:Y64 24.31567.86NoYes088
35R:R:E119 R:R:R134 12.33114.65NoYes288
36R:R:F107 R:R:S150 17.45992.64YesNo068
37R:R:E157 R:R:W158 11.28574.36YesYes153
38L:L:?1 R:R:R95 19.677715.26YesNo007
39R:R:I90 R:R:R95 13.162818.79NoNo037
40L:L:?1 R:R:K96 58.95819.45YesNo005
41R:R:K96 R:R:Y240 55.82193.58NoNo054
42R:R:F232 R:R:Y106 53.338315.47YesYes068
43R:R:L110 R:R:Y106 44.06844.69NoYes078
44R:R:F107 R:R:W183 13.24943.01YesYes065
45R:R:F225 R:R:L110 40.35466.09NoNo497
46R:R:F225 R:R:L191 40.8347.31NoNo098
47R:R:L191 R:R:S117 16.88813NoNo089
48R:R:S117 R:R:S194 15.64633.26NoNo098
49R:R:C121 R:R:S194 13.12811.72NoNo078
50R:R:E119 R:R:Y130 10.54647.86NoYes287
51R:R:R159 R:R:Y240 21.80899.26YesNo034
52R:R:L191 R:R:V222 26.09454.47NoNo088
53R:R:S195 R:R:V222 21.41043.23NoNo088
54R:R:I218 R:R:S195 20.20911.55NoNo088
55R:R:I218 R:R:L198 19.15792.85NoNo088
56R:R:L198 R:R:V124 17.93921.49NoNo088
57R:R:I202 R:R:V124 16.87071.54NoNo078
58R:R:I239 R:R:Y240 31.97414.84NoNo044
59R:R:I239 R:R:L249 19.36012.85NoYes041
60R:R:F107 R:R:Y106 21.09285.16YesYes068
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:R82 16.28 1 Yes No 0 4 0 1
L:L:?1 R:R:R95 15.26 1 Yes No 0 7 0 1
L:L:?1 R:R:K96 9.45 1 Yes No 0 5 0 1
L:L:?1 R:R:L98 11.59 1 Yes No 0 4 0 1
L:L:?1 R:R:V99 4.99 1 Yes No 0 5 0 1
L:L:?1 R:R:W158 7.63 1 Yes Yes 0 3 0 1
L:L:?1 R:R:Y250 12.76 1 Yes No 0 3 0 1
L:L:?1 R:R:Y254 19.64 1 Yes Yes 0 3 0 1
R:R:Q79 R:R:R82 3.5 0 Yes No 6 4 2 1
R:R:M258 R:R:R82 3.72 1 Yes No 4 4 2 1
R:R:I90 R:R:R95 18.79 0 No No 3 7 2 1
R:R:H92 R:R:R95 13.54 0 No No 6 7 2 1
R:R:K96 R:R:Y240 3.58 0 No No 5 4 1 2
R:R:V99 R:R:W158 8.58 1 No Yes 5 3 1 1
R:R:E157 R:R:T103 2.82 1 Yes Yes 5 4 2 2
R:R:T103 R:R:W158 6.06 1 Yes Yes 4 3 2 1
R:R:E157 R:R:W158 4.36 1 Yes Yes 5 3 2 1
R:R:E157 R:R:G236 4.91 1 Yes No 5 4 2 2
R:R:F232 R:R:W158 3.01 1 Yes Yes 6 3 2 1
R:R:G236 R:R:W158 9.85 1 No Yes 4 3 2 1
R:R:W158 R:R:Y254 5.79 1 Yes Yes 3 3 1 1
R:R:F232 R:R:Y254 3.09 1 Yes Yes 6 3 2 1
R:R:F232 R:R:M258 4.98 1 Yes Yes 6 4 2 2
R:R:Y250 R:R:Y254 3.97 1 No Yes 3 3 1 1
R:R:M258 R:R:Y254 7.18 1 Yes Yes 4 3 2 1
R:R:C251 R:R:Y250 1.34 0 No No 2 3 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7S8P_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.69
Number of Linked Nodes 227
Number of Links 243
Number of Hubs 26
Number of Links mediated by Hubs 101
Number of Communities 6
Number of Nodes involved in Communities 28
Number of Links involved in Communities 37
Path Summary
Number Of Nodes in MetaPath 61
Number Of Links MetaPath 60
Number of Shortest Paths 32540
Length Of Smallest Path 3
Average Path Length 13.38
Length of Longest Path 29
Minimum Path Strength 1.37
Average Path Strength 5.60103
Maximum Path Strength 17.8967
Minimum Path Correlation 0.7
Average Path Correlation 0.917312
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.16667
Average % Of Corr. Nodes 46.7341
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 33.7702
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
Code8IX
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
Code8IX
NameN-[(1r,3R,5S,7R)-3,5-dimethyltricyclo[3.3.1.1~3,7~]decane-1-carbonyl]-D-phenylalanine
Synonyms
Identifier
FormulaC22 H29 N O3
Molecular Weight355.471
SMILES
PubChem
Formal Charge0
Total Atoms55
Total Chiral Atoms3
Total Bonds58
Total Aromatic Bonds6

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ96LA9
Sequence
>7S8P_nogp_Chain_R
QTLSFTVLT CIISLVGLT GNAVVLWLL GYRMRRNAV SIYILNLAA 
ADFLFLSFQ IIRLPLRLI NISHLIRKI LVSVMTFPY FTGLSMLSA 
ISTERCLSV LWPIWYRCR RPTHLSAVV CVLLWGLSL LFSMLEWRF 
CDFWCETSD FIPVAWLIF LCVVLCVSS LVLLVRILC GSRKMPLTR 
LYVTILLTV LVFLLCGLP FGILGALIY RMHLNLEVL YCHVYLVCM 
SLSSLNSSA NPIIYFFVG SFRQ


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7S8PAOrphanOrphanMRGPRX4Homo sapiensMS47134-chim(NtGi2L-Gs-CtGq)/β1/γ22.62021-11-17doi.org/10.1038/s41586-021-04126-6
7S8P (No Gprot) AOrphanOrphanMRGPRX4Homo sapiensMS47134-2.62021-11-17doi.org/10.1038/s41586-021-04126-6
8YRGAOrphanOrphanMRGPRX4Homo sapiensFospropofol-chim(NtGi1-Gs-CtGq)/β1/γ23.142024-05-22doi.org/10.1126/scitranslmed.adk8198
8YRG (No Gprot) AOrphanOrphanMRGPRX4Homo sapiensFospropofol-3.142024-05-22doi.org/10.1126/scitranslmed.adk8198
8K4SAOrphanOrphanMRGPRX4Homo sapiensDCA-3P-chim(NtGi1L-Gs-CtGq)/β1/γ22.92024-11-06doi.org/10.1016/j.cell.2024.10.001
8K4S (No Gprot) AOrphanOrphanMRGPRX4Homo sapiensDCA-3P-2.92024-11-06doi.org/10.1016/j.cell.2024.10.001
8KEXAOrphanOrphanMRGPRX4Homo sapiensDCA-3P--3.22024-11-06doi.org/10.1016/j.cell.2024.10.001




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Download 7S8P_nogp.zip



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