Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F93 4.72409
2R:R:L99 9.8575439
3R:R:N103 6.7675439
4R:R:N104 6.448539
5R:R:F106 7.15468
6R:R:L110 4.8775409
7R:R:I117 5.505419
8R:R:W134 10.0829729
9R:R:W144 5.285428
10R:R:N153 4.646519
11R:R:Y167 7.29509
12R:R:R180 8.08539
13R:R:I189 4.44409
14R:R:W193 4.944579
15R:R:W200 12.162519
16R:R:W207 6.5575406
17R:R:Q208 5.565407
18R:R:R214 7.6575407
19R:R:I223 6.58428
20R:R:F225 6.302529
21R:R:F240 8.81519
22R:R:Y241 4.9325408
23R:R:Y251 6.74857749
24R:R:Y255 5.0575407
25R:R:F500 6.686519
26R:R:W504 7.63125819
27R:R:T515 5.5875408
28R:R:I521 2.78408
29R:R:W526 5.11506
30R:R:Y530 7.25517
31R:R:W531 7.38458
32R:R:Y534 6.30667619
33R:R:N536 6.03419
34R:R:Y544 6.66833649
35R:R:F551 11.44439
36R:R:F555 7.592509
37L:L:?1 8.759171210
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:M122 R:R:Y534 12.46927.18NoYes099
2R:R:F125 R:R:Y530 23.00584.13NoYes087
3R:R:F125 R:R:W531 11.18646.01NoYes088
4R:R:D114 R:R:S537 10.738310.31NoNo099
5R:R:I117 R:R:S537 10.63756.19YesNo099
6R:R:I117 R:R:Y534 10.32944.84YesYes199
7R:R:F551 R:R:F555 17.174511.79YesYes099
8R:R:F551 R:R:N104 19.37049.67YesYes399
9R:R:N103 R:R:N104 30.44484.09YesYes399
10R:R:N103 R:R:R180 32.81994.82YesYes399
11R:R:D165 R:R:R180 40.695713.1NoYes099
12R:R:D165 R:R:F106 41.31759.55NoYes098
13R:R:F106 R:R:I189 48.43156.28YesYes089
14R:R:I189 R:R:S109 50.90196.19YesNo099
15R:R:N158 R:R:S109 47.423310.43NoNo799
16R:R:L110 R:R:N158 62.50845.49YesNo099
17R:R:L110 R:R:N540 1006.87YesNo099
18R:R:N536 R:R:N540 92.11855.45YesNo099
19R:R:N536 R:R:W504 76.356.78YesYes199
20L:L:?1 R:R:W504 80.06394.33YesYes109
21L:L:?1 R:R:Y530 73.134713.37YesYes107
22R:R:A185 R:R:V102 10.31261.7NoNo088
23R:R:R180 R:R:V102 11.707413.08YesNo098
24R:R:N158 R:R:W193 14.24494.52NoYes799
25R:R:L110 R:R:L159 47.72574.15YesNo099
26R:R:I120 R:R:I147 11.01282.94NoNo066
27R:R:I116 R:R:I147 12.5422.94NoNo086
28R:R:I116 R:R:W193 14.062.35NoYes089
29R:R:L145 R:R:W144 26.01954.56NoYes288
30R:R:I223 R:R:L145 25.88515.71YesNo288
31R:R:I223 R:R:L226 55.34395.71YesNo087
32R:R:L226 R:R:N514 56.40264.12NoNo077
33R:R:N514 R:R:W526 57.33259.04NoYes076
34R:R:W526 R:R:Y530 69.06793.86YesYes067
35R:R:W134 R:R:W144 18.6594.69YesYes298
36R:R:W134 R:R:Y128 10.497410.61YesNo098
37R:R:Q208 R:R:Q224 19.01197.68YesNo078
38R:R:Q224 R:R:W207 21.80158.76NoYes086
39R:R:F225 R:R:W207 27.212610.02YesYes096
40R:R:F225 R:R:I223 29.8237.54YesYes298
41L:L:?1 R:R:N153 13.40475.22YesYes109
42R:R:L159 R:R:Y544 46.67265.86NoYes099
43R:R:L250 R:R:S163 25.47617.51NoNo089
44R:R:S163 R:R:Y251 26.316411.45NoYes099
45R:R:Y251 R:R:Y544 37.94534.96YesYes499
46R:R:F168 R:R:Y167 12.16117.22NoYes079
47R:R:L250 R:R:Y167 23.829311.72NoYes089
48R:R:T171 R:R:Y167 15.32048.74NoYes089
49R:R:R180 R:R:Y176 12.32925.14YesNo099
50R:R:F233 R:R:T515 10.61515.19NoYes088
51R:R:F233 R:R:L512 13.242218.27NoNo087
52R:R:L512 R:R:Y241 15.68455.86NoYes078
53R:R:F240 R:R:Y241 31.1455.16YesYes098
54R:R:F240 R:R:W504 20.41799.02YesYes199
55R:R:F240 R:R:N508 12.026714.5YesNo099
56L:L:?1 R:R:N508 11.87545.22YesNo009
57R:R:I237 R:R:Y241 10.61516.04NoYes078
58R:R:L493 R:R:Y251 18.89985.86NoYes099
59R:R:E259 R:R:Y255 13.219811.22NoYes077
60R:R:L493 R:R:Y255 17.48822.34NoYes097
61R:R:I521 R:R:W526 13.45513.52YesYes086
62R:R:I501 R:R:V244 10.2793.07NoNo088
63R:R:F125 R:R:I129 11.49452.51NoNo088
64R:R:D114 R:R:N540 12.956510.77NoNo099
65R:R:F500 R:R:N536 15.29246.04YesYes199
66R:R:F168 R:R:Y176 11.320920.63NoNo079
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:I117 R:R:S121 7.74 1 Yes No 9 9 2 2
R:R:I117 R:R:Y534 4.84 1 Yes Yes 9 9 2 1
R:R:D148 R:R:S121 8.83 1 No No 9 9 1 2
R:R:S121 R:R:Y534 6.36 1 No Yes 9 9 2 1
R:R:M122 R:R:Y534 7.18 0 No Yes 9 9 2 1
R:R:F125 R:R:Y530 4.13 0 No Yes 8 7 2 1
R:R:D148 R:R:Y534 8.05 1 No Yes 9 9 1 1
L:L:?1 R:R:D148 13.76 1 Yes No 0 9 0 1
R:R:C149 R:R:W200 13.06 1 No Yes 9 9 1 1
L:L:?1 R:R:C149 7.04 1 Yes No 0 9 0 1
R:R:S152 R:R:W504 6.18 1 No Yes 9 9 1 1
L:L:?1 R:R:S152 6.66 1 Yes No 0 9 0 1
R:R:M157 R:R:N153 4.21 0 No Yes 8 9 2 1
R:R:N153 R:R:S196 4.47 1 Yes No 9 9 1 2
R:R:N153 R:R:W200 7.91 1 Yes Yes 9 9 1 1
L:L:?1 R:R:N153 5.22 1 Yes Yes 0 9 0 1
R:R:F500 R:R:V156 3.93 1 Yes No 9 9 2 2
R:R:V156 R:R:W504 4.9 1 No Yes 9 9 2 1
R:R:L199 R:R:W200 7.97 0 No Yes 8 9 2 1
R:R:T235 R:R:W200 14.55 0 No Yes 9 9 2 1
L:L:?1 R:R:W200 17.32 1 Yes Yes 0 9 0 1
R:R:F240 R:R:F500 7.5 1 Yes Yes 9 9 2 2
R:R:F240 R:R:W504 9.02 1 Yes Yes 9 9 2 1
R:R:F240 R:R:N508 14.5 1 Yes No 9 9 2 1
R:R:F500 R:R:W504 12.03 1 Yes Yes 9 9 2 1
R:R:F500 R:R:N536 6.04 1 Yes Yes 9 9 2 2
R:R:T503 R:R:W504 6.06 1 No Yes 9 9 2 1
R:R:N536 R:R:T503 5.85 1 Yes No 9 9 2 2
R:R:C533 R:R:W504 11.75 1 No Yes 9 9 1 1
R:R:N536 R:R:W504 6.78 1 Yes Yes 9 9 2 1
L:L:?1 R:R:W504 4.33 1 Yes Yes 0 9 0 1
R:R:V511 R:R:Y507 8.83 0 No No 8 9 2 1
R:R:Y507 R:R:Y530 7.94 1 No Yes 9 7 1 1
L:L:?1 R:R:Y507 21.54 1 Yes No 0 9 0 1
L:L:?1 R:R:N508 5.22 1 Yes No 0 9 0 1
R:R:W526 R:R:Y530 3.86 0 Yes Yes 6 7 2 1
R:R:Y530 R:R:Y534 6.95 1 Yes Yes 7 9 1 1
L:L:?1 R:R:Y530 13.37 1 Yes Yes 0 7 0 1
L:L:?1 R:R:C533 4.02 1 Yes No 0 9 0 1
L:L:?1 R:R:Y534 4.46 1 Yes Yes 0 9 0 1
L:L:?1 R:R:G239 2.17 1 Yes No 0 9 0 1
R:R:I195 R:R:N153 1.42 0 No Yes 6 9 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8E9Y_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.86
Number of Linked Nodes 265
Number of Links 291
Number of Hubs 37
Number of Links mediated by Hubs 154
Number of Communities 7
Number of Nodes involved in Communities 49
Number of Links involved in Communities 70
Path Summary
Number Of Nodes in MetaPath 67
Number Of Links MetaPath 66
Number of Shortest Paths 36568
Length Of Smallest Path 3
Average Path Length 13.3473
Length of Longest Path 31
Minimum Path Strength 1.365
Average Path Strength 6.5291
Maximum Path Strength 20.365
Minimum Path Correlation 0.7
Average Path Correlation 0.923872
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.7037
Average % Of Corr. Nodes 49.451
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 48.5307
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeWE9
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeWE9
Name8-chloro-11-(4-methyl-4-oxo-4lambda~5~-piperazin-1-yl)-5H-dibenzo[b,e][1,4]diazepine
Synonyms
Identifier
FormulaC18 H19 Cl N4 O
Molecular Weight342.823
SMILES
PubChem135445691
Formal Charge0
Total Atoms43
Total Chiral Atoms0
Total Bonds46
Total Aromatic Bonds12

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP20309
Sequence
>8E9Y_nogp_Chain_R
VWQVVFIAF LTGILALVT IIGNILVIV SFKVNKQLK TVNNYFLLS 
LACADLIIG VISMNLFTT YIIMNRWAL GNLACDLWL AIDCVASNA 
SVMNLLVIS FDRYFSITR PLTYRAKRT TKRAGVMIG LAWVISFVL 
WAPAILFWQ YFVGKRTVP PGECFIQFL SEPTITFGT AIAGFYMPV 
TIMTILYWR IYKETEKRT KELEKKAAQ TLSAILLAF IITWTPYNI 
MVLVNTFCD SCIPKTFWN LGYWLCYIN STVNPVCYA LCNKTFRTT 
FKMLLLCQC


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
4U14AAmineAcetylcholine (muscarinic)M3Rattus norvegicusTiotropium--3.572014-11-26doi.org/10.1016/j.str.2014.08.022
4U15AAmineAcetylcholine (muscarinic)M3Rattus norvegicusTiotropium--2.82014-11-26doi.org/10.1016/j.str.2014.08.022
4U16AAmineAcetylcholine (muscarinic)M3Rattus norvegicusN-Methyl-Scopolamine--3.72014-11-26doi.org/10.1016/j.str.2014.08.022
4DAJAAmineAcetylcholine (muscarinic)M3Rattus norvegicusTiotropium--3.42012-02-22doi.org/10.1038/nature10867
8E9WAAmineAcetylcholine (muscarinic)M3Homo sapiens2-Deoxycytidine-chim(NtGi2L-Gs-CtGq)/β1/γ22.692022-11-30doi.org/10.1038/s41586-022-05489-0
8E9W (No Gprot) AAmineAcetylcholine (muscarinic)M3Homo sapiens2-Deoxycytidine-2.692022-11-30doi.org/10.1038/s41586-022-05489-0
8E9YAAmineAcetylcholine (muscarinic)M3Homo sapiensClozapine-N-oxide-chim(NtGi2L-Gs-CtGq)/β1/γ22.792022-11-30doi.org/10.1038/s41586-022-05489-0
8E9Y (No Gprot) AAmineAcetylcholine (muscarinic)M3Homo sapiensClozapine-N-oxide-2.792022-11-30doi.org/10.1038/s41586-022-05489-0
8E9ZAAmineAcetylcholine (muscarinic)M3Homo sapiensIperoxo-chim(NtGi2L-Gs-CtGq)/β1/γ22.692022-11-30doi.org/10.1038/s41586-022-05489-0
8E9Z (No Gprot) AAmineAcetylcholine (muscarinic)M3Homo sapiensIperoxo-2.692022-11-30doi.org/10.1038/s41586-022-05489-0
8EA0AAmineAcetylcholine (muscarinic)M3Homo sapiensIperoxo--2.562022-11-30doi.org/10.1038/s41586-022-05489-0
5ZHPAAmineAcetylcholine (muscarinic)M3Rattus norvegicusPubChem 134828589--3.12018-11-28doi.org/10.1073/pnas.1813988115
7M3JCIonCalcium SensingCaSHomo sapiens-NPS-2143; PO4-4.12021-06-30doi.org/10.1038/s41586-021-03691-0
7M3ECIonCalcium SensingCaSHomo sapiens-Ca; Ca; Tryptophan; NPS-2143-3.22021-06-30doi.org/10.1038/s41586-021-03691-0
7M3GCIonCalcium SensingCaSHomo sapiens-Ca; Ca; Tryptophan; Evocalcet; Etelcalcetide; PO4-2.52021-06-30doi.org/10.1038/s41586-021-03691-0
7M3FCIonCalcium SensingCaSHomo sapiens-Ca; Ca; Tryptophan; Cinacalcet; PO4-2.82021-06-30doi.org/10.1038/s41586-021-03691-0
9CM3ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375Compound 187chim(NtGi1L-Gs-CtGq)/β1/γ23.062025-06-25doi.org/10.1038/s41586-025-09186-6
9CM3 (No Gprot) ALipidFree Fatty AcidFFA2Homo sapiensTUG-1375Compound 1873.062025-06-25doi.org/10.1038/s41586-025-09186-6




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