Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:F6 6.04420
2L:L:M10 5.0575410
3R:R:Q77 8.525404
4R:R:R84 10.3283623
5R:R:W88 9.5925425
6R:R:F123 5.364507
7R:R:D131 6.02409
8R:R:M134 6.4075407
9R:R:F143 10.055407
10R:R:W151 9.48438
11R:R:F153 10.275436
12R:R:Y157 12.8075436
13R:R:N162 9.814515
14R:R:F164 8.425435
15R:R:F170 7.5775405
16R:R:W208 6.3975409
17R:R:Q218 10.1125414
18R:R:S222 7.1975414
19R:R:R230 7.6675403
20R:R:L232 5.205404
21R:R:F234 12.07511
22R:R:Q236 9.5675415
23R:R:W237 11.745407
24R:R:F245 6.605402
25R:R:H248 6.728514
26R:R:Y267 8.28409
27R:R:F308 5.77419
28R:R:W312 6.2525418
29R:R:Y315 9.262516
30R:R:Y318 10.8075404
31R:R:F319 10.265415
32R:R:Q335 9.472523
33R:R:Q336 6.924521
34R:R:Y338 12.7975404
35R:R:F342 9.358545
36R:R:W343 6.2425405
37R:R:T349 4.6725409
38R:R:Y351 6.01406
39R:R:Y356 8.0125409
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F78 R:R:Q77 10.889319.91NoYes044
2L:L:F6 R:R:F78 11.87625.36YesNo204
3L:L:F6 R:R:Y338 37.252611.35YesYes004
4R:R:F342 R:R:Y338 81.531619.6YesYes054
5R:R:F342 R:R:N142 40.8567.25YesNo456
6R:R:N142 R:R:Q161 39.64366.6NoNo065
7R:R:Q161 R:R:Y157 32.707413.53NoYes056
8R:R:W151 R:R:Y157 37.44436.75YesYes386
9R:R:W151 R:R:Y145 10.748311.58YesNo085
10R:R:Y318 R:R:Y338 65.865915.89YesYes044
11R:R:F319 R:R:Y318 58.754911.35YesYes054
12L:L:M10 R:R:F319 10.18446.22YesYes105
13L:L:M10 R:R:Q218 21.0234.08YesYes104
14R:R:N162 R:R:Q218 10.088510.56YesYes154
15R:R:F319 R:R:H248 36.48569.05YesYes154
16R:R:F319 R:R:Y315 36.423614.44YesYes156
17R:R:L232 R:R:W151 25.97984.56YesYes048
18R:R:L232 R:R:T231 17.49842.95YesNo045
19R:R:E150 R:R:T231 15.34998.47NoNo055
20R:R:E150 R:R:R230 13.19012.33NoYes053
21R:R:Q335 R:R:R84 10.539715.19YesYes233
22R:R:F143 R:R:L147 12.0519.74YesNo074
23R:R:F342 R:R:Y92 35.78645.16YesNo056
24R:R:W343 R:R:Y92 19.77112.54YesNo056
25R:R:S347 R:R:W343 14.45333.71NoYes065
26R:R:S347 R:R:Y351 12.667.63NoYes066
27R:R:F342 R:R:M346 99.62789.95YesNo057
28R:R:M134 R:R:M346 1004.33YesNo077
29R:R:M134 R:R:S172 62.4266.13YesNo079
30R:R:D131 R:R:S172 46.64198.83YesNo099
31R:R:M134 R:R:T349 38.43684.52YesYes079
32R:R:D131 R:R:T349 37.13425.78YesYes099
33R:R:D131 R:R:N103 12.37244.04YesNo099
34R:R:D131 R:R:L127 74.37555.43YesNo099
35R:R:L127 R:R:N352 83.79864.12NoNo099
36R:R:N352 R:R:Y356 81.875611.63NoYes099
37R:R:L124 R:R:Y356 41.89938.21NoYes089
38R:R:F363 R:R:L124 26.1492.44NoNo098
39R:R:F363 R:R:I109 19.06053.77NoNo098
40R:R:I105 R:R:I109 12.1922.94NoNo068
41R:R:I110 R:R:L124 14.27285.71NoNo078
42R:R:S130 R:R:S172 37.55156.52NoNo089
43R:R:S130 R:R:W208 32.23936.18NoYes089
44R:R:N126 R:R:W208 24.9146.78NoYes099
45R:R:I204 R:R:N126 26.9619.91NoNo079
46R:R:F123 R:R:I204 24.31625.02YesNo077
47R:R:D182 R:R:F123 11.80298.36NoYes087
48R:R:D182 R:R:R194 10.528410.72NoNo084
49R:R:L127 R:R:S175 16.03796.01NoNo097
50R:R:F164 R:R:S133 17.56057.93YesNo057
51R:R:F160 R:R:F164 14.53229.65NoYes345
52R:R:F160 R:R:Y157 14.317910.32NoYes346
53R:R:T167 R:R:W208 18.40074.85NoYes049
54R:R:F212 R:R:T167 15.445819.46NoNo044
55R:R:F163 R:R:F212 13.951410.72NoNo064
56R:R:F163 R:R:F216 10.92886.43NoNo064
57R:R:H248 R:R:V251 22.67525.54YesNo044
58R:R:F170 R:R:V251 20.6623.93YesNo054
59R:R:W312 R:R:Y315 48.84119.65YesYes186
60R:R:F308 R:R:W312 38.98957.02YesYes198
61R:R:I173 R:R:P259 10.68633.39NoNo079
62R:R:R183 R:R:Y356 67.92426.17NoYes099
63R:R:R183 R:R:Y267 63.93168.23NoYes099
64R:R:M301 R:R:Y267 55.743513.17NoYes089
65R:R:M301 R:R:V270 51.58744.56NoNo089
66R:R:I187 R:R:V270 44.87116.14NoNo089
67R:R:I187 R:R:L274 42.61554.28NoNo088
68R:R:L274 R:R:T273 26.47612.95NoNo085
69R:R:I188 R:R:T273 24.12454.56NoNo065
70R:R:I188 R:R:Y184 12.203210.88NoNo068
71R:R:H248 R:R:Y247 13.97394.36YesNo046
72R:R:H244 R:R:H248 15.344310.75NoYes044
73R:R:H244 R:R:W237 11.746521.16NoYes047
74R:R:W237 R:R:Y247 14.210811.58YesNo076
75R:R:Q243 R:R:W237 23.9617.67NoYes027
76R:R:E239 R:R:Q243 19.190212.74NoNo042
77R:R:I334 R:R:Y318 16.51727.25NoYes044
78R:R:I334 R:R:L328 14.56042.85NoNo045
79R:R:L328 R:R:Y325 12.51344.69NoNo051
80R:R:I324 R:R:Y325 10.45518.46NoNo051
81R:R:H316 R:R:Y315 17.363110.89NoYes076
82R:R:H316 R:R:I252 15.6779.28NoNo075
83R:R:I252 R:R:Y256 12.27092.42NoNo058
84R:R:K294 R:R:L274 14.61125.64NoNo078
85R:R:K294 R:R:Q290 12.20325.42NoNo074
86R:R:F308 R:R:M263 41.30153.73YesNo098
87R:R:M263 R:R:V304 40.82781.52NoNo088
88R:R:M300 R:R:V304 40.40491.52NoNo088
89R:R:I355 R:R:M300 41.12675.83NoNo088
90R:R:I355 R:R:Y356 42.09676.04NoYes089
91R:R:A168 R:R:S133 17.29541.71NoNo077
92R:R:A168 R:R:S130 17.76911.71NoNo078
93L:L:F6 R:R:Q335 22.65274.68YesYes203
94R:R:F143 R:R:Y92 16.652622.69YesNo076
95R:R:N126 R:R:S175 14.47585.96NoNo097
96L:L:M10 R:R:Y315 23.50985.99YesYes106
97L:L:M10 R:R:H248 13.12813.94YesYes104
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:D4 R:R:Q77 9.14 0 No Yes 0 4 0 1
L:L:F5 R:R:N329 7.25 0 No No 0 5 0 1
L:L:F6 R:R:F78 5.36 2 Yes No 0 4 0 1
L:L:F6 R:R:Q335 4.68 2 Yes Yes 0 3 0 1
L:L:F6 R:R:Y338 11.35 2 Yes Yes 0 4 0 1
L:L:V7 R:R:Y145 10.09 0 No No 0 5 0 1
L:L:G8 R:R:Y338 4.35 0 No Yes 0 4 0 1
L:L:L9 R:R:N162 6.87 1 No Yes 0 5 0 1
L:L:L9 R:R:F234 20.7 1 No Yes 0 1 0 1
L:L:M10 R:R:Q218 4.08 1 Yes Yes 0 4 0 1
L:L:M10 R:R:H248 3.94 1 Yes Yes 0 4 0 1
L:L:M10 R:R:Y315 5.99 1 Yes Yes 0 6 0 1
L:L:M10 R:R:F319 6.22 1 Yes Yes 0 5 0 1
R:R:F78 R:R:Q77 19.91 2 No Yes 4 4 1 1
R:R:F78 R:R:Q335 10.54 2 No Yes 4 3 1 1
R:R:Q335 R:R:R84 15.19 2 Yes Yes 3 3 1 2
R:R:Q336 R:R:R84 12.85 2 Yes Yes 1 3 2 2
R:R:W151 R:R:Y145 11.58 3 Yes No 8 5 2 1
R:R:C158 R:R:S222 5.16 1 No Yes 9 4 2 2
R:R:C158 R:R:F234 12.57 1 No Yes 9 1 2 1
R:R:N162 R:R:Q218 10.56 1 Yes Yes 5 4 1 1
R:R:N162 R:R:S222 10.43 1 Yes Yes 5 4 1 2
R:R:F234 R:R:N162 13.29 1 Yes Yes 1 5 1 1
R:R:N162 R:R:Q236 7.92 1 Yes Yes 5 5 1 2
R:R:Q218 R:R:Q236 17.92 1 Yes Yes 4 5 1 2
R:R:Q218 R:R:Y247 7.89 1 Yes No 4 6 1 2
R:R:F234 R:R:S222 7.93 1 Yes Yes 1 4 1 2
R:R:F234 R:R:Q236 5.86 1 Yes Yes 1 5 1 2
R:R:H244 R:R:H248 10.75 0 No Yes 4 4 2 1
R:R:H248 R:R:Y247 4.36 1 Yes No 4 6 1 2
R:R:H248 R:R:V251 5.54 1 Yes No 4 4 1 2
R:R:F319 R:R:H248 9.05 1 Yes Yes 5 4 1 1
R:R:W312 R:R:Y315 9.65 1 Yes Yes 8 6 2 1
R:R:H316 R:R:Y315 10.89 0 No Yes 7 6 2 1
R:R:F319 R:R:Y315 14.44 1 Yes Yes 5 6 1 1
R:R:A345 R:R:Y315 5.34 0 No Yes 7 6 2 1
R:R:F319 R:R:Y318 11.35 1 Yes Yes 5 4 1 2
R:R:Y318 R:R:Y338 15.89 0 Yes Yes 4 4 2 1
R:R:Q335 R:R:Q336 8.96 2 Yes Yes 3 1 1 2
R:R:L339 R:R:Q335 7.99 2 No Yes 4 3 2 1
R:R:L339 R:R:Q336 3.99 2 No Yes 4 1 2 2
R:R:F342 R:R:Y338 19.6 4 Yes Yes 5 4 2 1
L:L:V7 R:R:C233 3.42 0 No No 0 9 0 1
L:L:F5 R:R:C233 2.79 0 No No 0 9 0 1
L:L:F6 R:R:A146 2.77 2 Yes No 0 4 0 1
R:R:K332 R:R:Q77 2.71 0 No Yes 3 4 2 1
R:R:Q77 R:R:R330 2.34 0 Yes No 4 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 8JBG_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.93
Number of Linked Nodes 262
Number of Links 285
Number of Hubs 39
Number of Links mediated by Hubs 134
Number of Communities 5
Number of Nodes involved in Communities 35
Number of Links involved in Communities 48
Path Summary
Number Of Nodes in MetaPath 98
Number Of Links MetaPath 97
Number of Shortest Paths 47122
Length Of Smallest Path 3
Average Path Length 14.0989
Length of Longest Path 30
Minimum Path Strength 1.46
Average Path Strength 7.61919
Maximum Path Strength 17.615
Minimum Path Correlation 0.7
Average Path Correlation 0.918702
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 43.543
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 41.7923
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtP29371
Sequence
>8JBG_nogp_Chain_R
NQFVQPSWR IALWSLAYG VVVAVAVLG NLIVIWIIL AHKMRTVTN 
YFLVNLAFS DASMAAFNT LVNFIYALH SEWYFGANY CRFQNFFPI 
TAVFASIYS MTAIAVDRY MAIIDPLKP RLSATATKI VIGSIWILA 
FLLAFPQCL YSKTKVMPG RTLCFVQWP EGPKQHFTY HIIVIILVY 
CFPLLIMGI TYTIVGITL WQLKAKRKV VKMMIIVVM TFAICWLPY 
HIYFILTAI YQQLNRWKY IQQVYLASF WLAMSSTMY NPIIYCCLN 
KRFRAGFK


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8JBFAPeptideTachykininNK3Homo sapiensSenktide-chim(NtGi1-Gs-CtGq)/β1/γ232024-02-28doi.org/10.1038/s41421-023-00564-w
8JBF (No Gprot) APeptideTachykininNK3Homo sapiensSenktide-32024-02-28doi.org/10.1038/s41421-023-00564-w
8JBGAPeptideTachykininNK3Homo sapiensNeurokinin-B-chim(NtGi1-Gs-CtGq)/β1/γ22.82024-02-07doi.org/10.1038/s41421-023-00564-w
8JBG (No Gprot) APeptideTachykininNK3Homo sapiensNeurokinin-B-2.82024-02-07doi.org/10.1038/s41421-023-00564-w
8JBHAPeptideTachykininNK3Homo sapiensSubstance-P-chim(NtGi1-Gs-CtGq)/β1/γ22.92024-02-07doi.org/10.1038/s41421-023-00564-w
8JBH (No Gprot) APeptideTachykininNK3Homo sapiensSubstance-P-2.92024-02-07doi.org/10.1038/s41421-023-00564-w




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Download 8JBG_nogp.zip



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