Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F190 4.76617
2R:R:E194 2.925417
3R:R:I202 4.4475417
4R:R:T216 4.796568
5R:R:Y229 5.142509
6R:R:P230 5.4425409
7R:R:P233 5.175427
8R:R:I234 5.56549
9R:R:I235 5.975408
10R:R:Y236 7.9725428
11R:R:Y237 6.775438
12R:R:Y241 5.908508
13R:R:Y248 5.2275417
14R:R:L254 1.9375404
15R:R:L275 3.485408
16R:R:C282 5.53409
17R:R:Y290 7.228509
18R:R:F291 5.07529
19R:R:F292 3.976529
20R:R:W299 9.35629
21R:R:W300 8.93539
22R:R:I302 4.756527
23R:R:W307 5.2775409
24R:R:I320 5.7325408
25R:R:W332 5.352529
26R:R:T339 3.3575428
27R:R:L342 5.945477
28R:R:D351 4.906519
29R:R:I353 7.7925417
30R:R:S354 4.164518
31R:R:Y424 11.195438
32R:R:L428 4.845438
33R:R:W445 11.185409
34R:R:W449 7.99406
35R:R:I459 4.3925406
36R:R:P462 3.09404
37R:R:P471 9.34408
38R:R:L484 5.7775418
39R:R:V486 4.4438
40R:R:W493 10.938549
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:F159 R:R:L176 10.56666.09NoNo045
2R:R:C161 R:R:P162 13.61163.77NoNo096
3R:R:I459 R:R:P162 12.33436.77YesNo066
4R:R:C161 R:R:C181 14.93137.28NoNo099
5R:R:C181 R:R:F175 18.74514.19NoNo096
6R:R:F175 R:R:Y173 37.96237.22NoNo066
7R:R:L275 R:R:Y173 41.12233.52YesNo086
8R:R:E446 R:R:L176 11.305211.93NoNo055
9R:R:A182 R:R:L275 99.37653.15NoYes078
10R:R:A182 R:R:T272 99.5463.36NoNo076
11R:R:L275 R:R:P183 68.92063.28YesNo086
12R:R:P183 R:R:Y362 67.85828.34NoNo065
13R:R:I459 R:R:Y457 13.24846.04YesNo064
14R:R:W449 R:R:Y457 12.11339.65YesNo064
15R:R:F476 R:R:P471 15.87265.78NoYes078
16R:R:F190 R:R:F476 29.20277.5YesNo077
17R:R:F190 R:R:I353 47.9723.77YesYes177
18R:R:I353 R:R:N187 22.16248.5YesNo076
19R:R:N352 R:R:Y362 23.76055.81NoNo075
20R:R:D351 R:R:I353 24.57785.6YesYes197
21R:R:D351 R:R:S354 17.3834.42YesYes198
22R:R:S354 R:R:Y248 11.75316.36YesYes187
23R:R:P427 R:R:V486 11.45051.77NoYes088
24R:R:L375 R:R:L428 31.29126.92NoYes068
25R:R:L375 R:R:T297 31.81794.42NoNo066
26R:R:M294 R:R:T297 32.02983.01NoNo076
27R:R:M294 R:R:Y290 32.495911.97NoYes079
28R:R:L342 R:R:Y290 39.31844.69YesYes079
29R:R:F286 R:R:L342 42.39068.53NoYes797
30R:R:F286 R:R:V348 43.631610.49NoNo098
31R:R:C282 R:R:V348 44.81813.42YesNo098
32R:R:C282 R:R:V274 1005.12YesNo097
33R:R:N261 R:R:V274 99.85472.96NoNo057
34R:R:N261 R:R:T272 99.70342.92NoNo056
35R:R:C282 R:R:N279 70.22826.3YesNo097
36R:R:N279 R:R:T283 69.91345.85NoNo078
37R:R:M287 R:R:T283 69.65314.52NoNo088
38R:R:M287 R:R:T339 69.50183.01NoYes088
39R:R:F291 R:R:T339 68.6275.19YesYes298
40R:R:F291 R:R:W332 65.27946.01YesYes299
41R:R:W299 R:R:W332 53.63827.5YesYes299
42R:R:W299 R:R:Y236 16.950215.43YesYes298
43R:R:I235 R:R:Y236 15.53973.63YesYes088
44R:R:H328 R:R:W332 13.70856.35NoYes299
45R:R:H328 R:R:Y236 13.11528.71NoYes298
46R:R:I234 R:R:L303 23.79384.28YesNo099
47R:R:L303 R:R:P233 24.11473.28NoYes097
48R:R:P233 R:R:W299 31.18235.4YesYes279
49R:R:R232 R:R:Y236 13.55714.12NoYes098
50R:R:E231 R:R:R228 10.64533.49NoNo097
51R:R:P233 R:R:T306 14.63475.25YesNo078
52R:R:T306 R:R:Y229 13.75997.49NoYes089
53R:R:P230 R:R:Y229 12.73684.17YesYes099
54R:R:P230 R:R:R228 10.711910.09YesNo097
55R:R:I302 R:R:W299 12.79447.05YesYes279
56R:R:F327 R:R:I302 11.76833.77NoYes287
57R:R:F327 R:R:Y229 10.89964.13NoYes089
58R:R:I320 R:R:Y229 20.94267.25YesYes089
59R:R:I234 R:R:W493 12.26777.05YesYes499
60R:R:F420 R:R:I234 16.53255.02NoYes489
61R:R:L428 R:R:Y424 22.09883.52YesYes388
62R:R:Y237 R:R:Y424 16.99267.94YesYes388
63R:R:S489 R:R:Y237 26.6336.36NoYes078
64R:R:F358 R:R:Y290 13.32717.22NoYes089
65R:R:F358 R:R:L289 12.24954.87NoNo086
66R:R:L289 R:R:M247 11.16592.83NoNo066
67R:R:V371 R:R:Y290 10.07637.57NoYes079
68R:R:I417 R:R:W493 16.46592.35NoYes089
69R:R:L361 R:R:Y362 43.77994.69NoNo075
70R:R:E438 R:R:F476 12.848812.83NoNo097
71R:R:P462 R:R:V450 10.68163.53YesNo043
72R:R:E446 R:R:F175 19.10224.66NoNo056
73R:R:N187 R:R:N352 23.17944.09NoNo067
74R:R:D351 R:R:L361 43.18664.07YesNo097
75R:R:F420 R:R:S489 25.11966.61NoNo087
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8JHB_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.92
Number of Linked Nodes 310
Number of Links 337
Number of Hubs 40
Number of Links mediated by Hubs 146
Number of Communities 8
Number of Nodes involved in Communities 50
Number of Links involved in Communities 65
Path Summary
Number Of Nodes in MetaPath 76
Number Of Links MetaPath 75
Number of Shortest Paths 61778
Length Of Smallest Path 3
Average Path Length 17.7607
Length of Longest Path 38
Minimum Path Strength 1.41
Average Path Strength 5.4483
Maximum Path Strength 17.26
Minimum Path Correlation 0.7
Average Path Correlation 0.938361
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.22581
Average % Of Corr. Nodes 48.2893
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 37.6129
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function• phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • mu-type opioid receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • opioid receptor binding   • beta-2 adrenergic receptor binding   • adrenergic receptor binding   • ionotropic glutamate receptor binding   • glutamate receptor binding   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • peptide hormone receptor binding   • corticotropin-releasing hormone receptor binding   • corticotropin-releasing hormone receptor 1 binding   • hormone receptor binding   • neuropeptide receptor binding   • D1 dopamine receptor binding   • dopamine receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • molecular function activator activity   • enzyme activator activity   • cyclase activator activity   • adenylate cyclase activator activity   • cation binding   • metal ion binding   • insulin-like growth factor receptor binding   • developmental process   • multicellular organism development   • multicellular organismal process   • skeletal system development   • anatomical structure development   • animal organ development   • bone development   • system development   • regulation of body fluid levels   • wound healing   • response to stimulus   • homotypic cell-cell adhesion   • cell activation   • hemostasis
Gene OntologyBiological Process• developmental process   • multicellular organism development   • multicellular organismal process   • skeletal system development   • anatomical structure development   • animal organ development   • bone development   • system development   • regulation of body fluid levels   • wound healing   • response to stimulus   • homotypic cell-cell adhesion   • cell activation   • hemostasis   • biological regulation   • platelet aggregation   • blood coagulation   • cell adhesion   • cell-cell adhesion   • response to stress   • coagulation   • cellular process   • regulation of biological quality   • response to wounding   • platelet activation   • developmental growth   • growth   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • signaling   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cell communication   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • signal transduction   • homeostatic process   • positive regulation of biological process   • adaptive thermogenesis   • positive regulation of metabolic process   • multicellular organismal-level homeostasis   • regulation of cold-induced thermogenesis   • cold-induced thermogenesis   • temperature homeostasis   • positive regulation of cold-induced thermogenesis   • positive regulation of multicellular organismal process   • metabolic process   • regulation of multicellular organismal process   • regulation of metabolic process   • positive regulation of cellular process   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • cellular response to catecholamine stimulus   • serotonin receptor signaling pathway   • response to oxygen-containing compound   • response to nitrogen compound   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-activating serotonin receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to hormone   • response to endogenous stimulus   • response to alcohol   • response to prostaglandin E   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • adenylate cyclase-activating dopamine receptor signaling pathway   • G protein-coupled dopamine receptor signaling pathway   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • apical part of cell   • plasma membrane region   • apical plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • intracellular anatomical structure   • cytoplasm   • cytosol   • protein binding   • binding   • enzyme binding   • GTPase binding   • protein-containing complex binding   • pyrophosphatase activity   • GTPase activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular process   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • signal transduction   • cell communication   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • response to oxygen-containing compound   • cellular response to oxygen-containing compound   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to chemical stimulus   • cellular response to alcohol   • response to hormone   • response to chemical   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • plasma membrane bounded cell projection   • cell projection   • photoreceptor cell cilium   • organelle membrane   • vacuolar membrane   • lytic vacuole   • vacuole   • intracellular membrane-bounded organelle   • intracellular organelle   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • lysosome   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation   • molecular transducer activity   • transmembrane signaling receptor activity   • signaling receptor activity   • Wnt receptor activity   • G protein-coupled receptor activity   • ubiquitin protein ligase binding   • ubiquitin-like protein ligase binding   • Wnt-protein binding   • limb development   • appendage development   • embryonic morphogenesis   • embryonic limb morphogenesis   • embryo development   • embryonic appendage morphogenesis   • embryonic nail plate morphogenesis   • anatomical structure morphogenesis   • nail development   • appendage morphogenesis   • embryonic digit morphogenesis   • limb morphogenesis   • negative regulation of DNA-binding transcription factor activity   • RNA metabolic process   • regulation of primary metabolic process   • nucleobase-containing compound metabolic process   • RNA biosynthetic process   • nucleic acid biosynthetic process   • DNA-templated transcription   • regulation of RNA metabolic process   • regulation of nucleobase-containing compound metabolic process   • regulation of RNA biosynthetic process   • regulation of biosynthetic process   • negative regulation of molecular function   • primary metabolic process   • regulation of macromolecule metabolic process   • nucleobase-containing compound biosynthetic process   • gene expression   • macromolecule biosynthetic process   • nucleic acid metabolic process   • regulation of molecular function   • regulation of gene expression   • biosynthetic process   • regulation of DNA-binding transcription factor activity   • metabolic process   • regulation of macromolecule biosynthetic process   • regulation of DNA-templated transcription   • macromolecule metabolic process   • regulation of metabolic process   • cell surface receptor signaling pathway   • canonical Wnt signaling pathway   • Wnt signaling pathway   • head development   • brain development   • nervous system development   • central nervous system development   • cell proliferation in midbrain   • midbrain development   • neural precursor cell proliferation   • ear morphogenesis   • embryonic organ morphogenesis   • ear development   • sensory organ morphogenesis   • inner ear development   • inner ear morphogenesis   • animal organ morphogenesis   • embryonic organ development   • non-canonical Wnt signaling pathway   • negative regulation of signaling   • regulation of canonical Wnt signaling pathway   • negative regulation of biological process   • regulation of signal transduction   • negative regulation of cell communication   • negative regulation of Wnt signaling pathway   • negative regulation of cellular process   • regulation of signaling   • regulation of Wnt signaling pathway   • negative regulation of response to stimulus   • negative regulation of signal transduction   • negative regulation of canonical Wnt signaling pathway   • regulation of response to stimulus   • regulation of cell communication   • epithelium development   • epidermis development   • molting cycle process   • hair cycle   • tissue development   • skin development   • skin epidermis development   • hair follicle development   • molting cycle   • hair cycle process   • embryonic epithelial tube formation   • chordate embryonic development   • tube formation   • epithelial tube formation   • tube morphogenesis   • primary neural tube formation   • embryo development ending in birth or egg hatching   • epithelial tube morphogenesis   • morphogenesis of embryonic epithelium   • neural tube development   • tube development   • morphogenesis of an epithelium   • tissue morphogenesis   • neural tube closure   • neural tube formation   • anatomical structure formation involved in morphogenesis   • tube closure   • regulation of body fluid levels   • wound healing   • cell activation   • hemostasis   • blood coagulation   • response to stress   • coagulation   • regulation of biological quality   • response to wounding   • platelet activation   • Wnt signaling pathway, planar cell polarity pathway   • establishment of planar polarity   • establishment of body hair or bristle planar orientation   • establishment of tissue polarity   • morphogenesis of a polarized epithelium   • establishment of body hair planar orientation   • brain morphogenesis   • midbrain morphogenesis   • cell surface   • apicolateral plasma membrane   • organelle subcompartment   • endomembrane system   • endoplasmic reticulum subcompartment   • nuclear outer membrane-endoplasmic reticulum membrane network   • endoplasmic reticulum   • endoplasmic reticulum membrane   • intracellular vesicle   • cytoplasmic vesicle membrane   • vesicle membrane   • cytoplasmic vesicle   • intracellular membraneless organelle   • ciliary basal body   • microtubule organizing center   • cytoskeleton   • membraneless organelle   • microtubule cytoskeleton
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtO60353
Sequence
>8JHB_nogp_Chain_R
IGFWCPRHL KTSGGQGYK FLGIDQCAP PCPNMYFKS DELEFAKSF 
IGTVSIFCL CATLFTFLT FLIDVRRFR YPERPIIYY SVCYSIVSL 
MYFIGFLLG DSTACNKEL GDTVVLGSQ NKACTVLFM LLYFFTMAG 
TVWWVILTI TWFLAAGRK WSCEAIEQK AVWFHAVAW GTPGFLTVM 
LLAMNKVEG DNISGVCFV GLYDLDASR YFVLLPLCL CVFVGLSLL 
LAGIISLNH VRQVIQHDG RNQEKLKKF MIRIGVFSG LYLVPLVTL 
LGCYVYEQV NRITWEITW VSDHCRQYH IPCPYQAKA KARPELALF 
MIKYLMTLI VGISAVFWV G


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8JH7FProteinFrizzledFZD6Homo sapiens---3.22024-01-1710.1038/s41421-023-00627-y
8JHBFProteinFrizzledFZD6Homo sapiens--chim(NtGsXLas-Gs)/β1/γ23.32024-01-1710.1038/s41421-023-00627-y
8JHB (No Gprot) FProteinFrizzledFZD6Homo sapiens--3.32024-01-1710.1038/s41421-023-00627-y




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