Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:F58 3.4675407
2R:R:N61 7.005439
3R:R:N65 7.02439
4R:R:I71 3.9025406
5R:R:E121 7.285455
6R:R:F123 3.96405
7R:R:F124 7.41404
8R:R:L127 2.975405
9R:R:Y128 8.0625409
10R:R:Y130 3.872508
11R:R:Y144 5.615408
12R:R:W154 4.412505
13R:R:Q193 4.292502
14R:R:W207 9.2175424
15R:R:R208 8.51857724
16R:R:R212 8.4275425
17R:R:F220 6.44519
18R:R:F230 5.3525408
19R:R:Y231 5.98509
20R:R:W235 5.395405
21R:R:F260 5.162519
22R:R:Y267 10.25407
23R:R:I292 4.295405
24R:R:Y306 5.494519
25R:R:V310 5.41419
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:E103 R:R:E121 10.409612.69NoYes065
2R:R:E121 R:R:Y125 12.89843.37YesNo556
3R:R:V129 R:R:Y125 15.43313.79NoNo076
4R:R:V129 R:R:Y130 16.66983.79NoYes078
5R:R:Y126 R:R:Y130 32.02663.97NoYes058
6R:R:I122 R:R:Y126 34.27877.25NoNo065
7R:R:C180 R:R:I122 51.16233.27NoNo046
8R:R:C180 R:R:F123 58.88844.19NoYes045
9R:R:F123 R:R:F124 59.97255.36YesYes054
10R:R:F124 R:R:I98 66.912213.82YesNo044
11R:R:I98 R:R:S97 67.7523.1NoNo046
12R:R:F58 R:R:S97 68.58422.64YesNo076
13R:R:F58 R:R:L96 67.79783.65YesNo078
14R:R:L96 R:R:Y128 68.553611.72NoYes089
15R:R:S307 R:R:Y128 68.08038.9NoYes089
16R:R:D132 R:R:S307 68.62244.42NoNo098
17R:R:D132 R:R:Y306 43.76073.45NoYes199
18R:R:F260 R:R:Y306 57.37686.19YesYes199
19R:R:F220 R:R:F260 53.26955.36YesYes199
20R:R:F220 R:R:H268 1009.05YesNo099
21R:R:H268 R:R:Q303 95.743.71NoNo098
22R:R:Q303 R:R:Y267 94.304713.53NoYes087
23R:R:C264 R:R:Y306 52.592.69NoYes199
24R:R:C264 R:R:F220 52.04032.79NoYes199
25R:R:F263 R:R:Y306 12.860311.35NoYes089
26R:R:C90 R:R:N65 24.06769.45NoYes089
27R:R:N65 R:R:P311 27.37343.26YesNo099
28R:R:S315 R:R:V68 21.23143.23NoNo079
29R:R:F321 R:R:S315 20.04059.25NoNo087
30R:R:F321 R:R:I71 18.84198.79NoYes086
31R:R:D132 R:R:V310 25.58318.76NoYes199
32R:R:V310 R:R:Y314 86.56723.79YesNo099
33R:R:R143 R:R:Y314 64.373.09NoNo099
34R:R:R143 R:R:V139 30.26685.23NoNo098
35R:R:L85 R:R:V139 13.09692.98NoNo068
36R:R:L85 R:R:T165 11.94412.95NoNo066
37R:R:I82 R:R:V142 15.49416.14NoNo089
38R:R:I82 R:R:V139 17.673.07NoNo088
39R:R:I122 R:R:R183 19.055612.53NoNo066
40R:R:C118 R:R:R183 16.61642.79NoNo696
41R:R:C118 R:R:I113 15.43313.27NoNo098
42R:R:I113 R:R:Q193 10.40964.12NoYes082
43R:R:L175 R:R:Y130 10.40964.69NoYes058
44R:R:V136 R:R:Y314 21.96826.31NoNo089
45R:R:L227 R:R:V136 20.9914.47NoNo088
46R:R:L227 R:R:S140 20.14733NoNo089
47R:R:F230 R:R:S140 39.91685.28YesNo089
48R:R:R143 R:R:Y231 38.0125.14NoYes099
49R:R:S140 R:R:Y231 22.22396.36NoYes099
50R:R:F230 R:R:L141 14.86438.53YesNo085
51R:R:L141 R:R:L145 12.78394.15NoNo056
52R:R:F230 R:R:Y144 19.05945.16YesYes088
53R:R:L145 R:R:W154 10.7573.42NoYes065
54R:R:R208 R:R:R212 22.84615.33YesYes245
55R:R:N271 R:R:R212 42.241514.46NoYes055
56R:R:N271 R:R:Y267 62.251417.44NoYes057
57R:R:D274 R:R:R212 17.61273.57NoYes055
58R:R:D274 R:R:L296 16.90275.43NoNo054
59R:R:L296 R:R:N271 18.54794.12NoNo045
60R:R:I253 R:R:Y231 11.982312.09NoYes079
61R:R:I253 R:R:V249 10.8183.07NoNo076
62R:R:T299 R:R:Y267 25.44577.49NoYes087
63R:R:L270 R:R:T299 22.0562.95NoNo058
64R:R:L270 R:R:L273 17.11652.77NoNo056
65R:R:D274 R:R:I292 31.04177NoYes055
66R:R:I292 R:R:L273 15.5175.71YesNo056
67R:R:I292 R:R:L277 35.90111.43YesNo053
68R:R:I282 R:R:L277 15.43311.43NoNo033
69R:R:I282 R:R:L276 10.29512.85NoNo035
70R:R:D284 R:R:L277 15.43311.36NoNo013
71R:R:V310 R:R:Y306 68.72543.79YesYes199
72R:R:P311 R:R:V310 29.49575.3NoYes099
73R:R:C90 R:R:V68 20.67793.42NoNo089
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 8K4P_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.64
Number of Linked Nodes 252
Number of Links 269
Number of Hubs 25
Number of Links mediated by Hubs 101
Number of Communities 7
Number of Nodes involved in Communities 29
Number of Links involved in Communities 34
Path Summary
Number Of Nodes in MetaPath 74
Number Of Links MetaPath 73
Number of Shortest Paths 50342
Length Of Smallest Path 3
Average Path Length 17.1984
Length of Longest Path 36
Minimum Path Strength 1.24
Average Path Strength 5.65747
Maximum Path Strength 15.95
Minimum Path Correlation 0.7
Average Path Correlation 0.938075
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.84615
Average % Of Corr. Nodes 48.6112
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 33.6734
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• fibroblast proliferation   • cell population proliferation   • cellular process   • cellular response to nitrogen compound   • cellular response to stimulus   • response to dopamine   • regulation of cellular process   • response to stimulus   • signaling   • cellular response to dopamine   • response to monoamine   • cell communication   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • signal transduction   • regulation of biological process   • G protein-coupled dopamine receptor signaling pathway   • biological regulation   • response to oxygen-containing compound   • response to nitrogen compound   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to monoamine stimulus   • response to chemical   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • response to ketone   • response to prostaglandin   • response to lipid   • response to endogenous stimulus   • response to alcohol   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to alcohol   • response to hormone   • cellular response to lipid   • response to prostaglandin E   • cellular response to ketone   • cellular response to hormone stimulus   • cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex
Gene OntologyCellular Component• cellular anatomical structure   • membrane   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • plasma membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cell periphery   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • membrane-bounded organelle   • extracellular vesicle   • extracellular organelle   • extracellular region   • organelle   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • synapse   • cell junction   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • enzyme regulator activity   • adenylate cyclase inhibitor activity   • cyclase regulator activity   • molecular function inhibitor activity   • cyclase inhibitor activity   • molecular function regulator activity   • enzyme inhibitor activity   • adenylate cyclase regulator activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • catalytic activity   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • negative regulation of protein transport   • regulation of localization   • establishment of protein localization   • nitrogen compound transport   • negative regulation of biological process   • negative regulation of transport   • localization   • negative regulation of secretion   • negative regulation of hormone secretion   • negative regulation of secretion by cell   • intracellular protein localization   • regulation of biological quality   • regulation of peptide hormone secretion   • negative regulation of peptide hormone secretion   • regulation of hormone levels   • establishment of protein localization to extracellular region   • negative regulation of establishment of protein localization   • protein secretion   • establishment of localization   • regulation of protein secretion   • regulation of secretion   • negative regulation of protein secretion   • regulation of hormone secretion   • regulation of protein localization   • regulation of peptide secretion   • transport   • negative regulation of signaling   • hormone secretion   • negative regulation of cell communication   • protein localization to extracellular region   • negative regulation of peptide secretion   • peptide secretion   • regulation of secretion by cell   • secretion by cell   • amide transport   • signal release   • negative regulation of cellular process   • negative regulation of protein localization   • regulation of signaling   • regulation of transport   • secretion   • regulation of peptide transport   • regulation of establishment of protein localization   • export from cell   • cell-cell signaling   • regulation of protein transport   • peptide transport   • negative regulation of insulin secretion   • protein transport   • regulation of insulin secretion   • peptide hormone secretion   • macromolecule localization   • hormone transport   • regulation of cell communication   • insulin secretion   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • positive regulation of protein localization to cell periphery   • protein localization to cell periphery   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • regulation of protein localization to cell cortex   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • intracellular anatomical structure   • nucleus   • membrane-enclosed lumen   • intracellular membraneless organelle   • intracellular membrane-bounded organelle   • nucleolus   • intracellular organelle lumen   • intracellular organelle   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • cytoplasm   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • bounding membrane of organelle   • lysosomal membrane   • organelle membrane   • lysosome   • Golgi apparatus   • endomembrane system   • cilium   • plasma membrane bounded cell projection   • ciliary basal body   • cell projection   • G protein-coupled chemoattractant receptor activity   • C-C chemokine receptor activity   • molecular transducer activity   • chemokine receptor activity   • G protein-coupled receptor activity   • transmembrane signaling receptor activity   • signaling receptor activity   • cytokine receptor activity   • immune receptor activity   • C-C chemokine binding   • chemokine binding   • cytokine binding   • positive regulation of cytosolic calcium ion concentration   • cell chemotaxis   • chemotaxis   • response to external stimulus   • taxis   • locomotion   • intracellular signal transduction   • calcium-mediated signaling   • intracellular signaling cassette   • immune response   • host cell plasma membrane   • host cellular component   • host cell part   • host cell membrane   • other organism part   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • synaptic signaling   • cellular response to acetylcholine   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ76SF8
Sequence
>8K4P_nogp_Chain_R
YTWNVGILS LIFLINVLG NGLVTYIFC KHRSRAGAI DILLLGICL 
NSLCLSISL LAEVLMFLF PNIISTGLC RLEIFFYYL YVYLDIFSV 
VCVSLVRYL LVAYSTRSW PKKQSLGWV LTSAALLIA LVLSGDACR 
HRSRVVDPV SKQAMCYEN AGNMTADWR LHVRTVSVT AGFLLPLAL 
LILFYALTW CVVRRTKLQ ARRKVRGVI VAVVLLFFV FCFPYHVLN 
LLDTLLRRR WIRDSCYTR GLINVGLAV TSLLQALYS AVVPLIYSC 
LGSLFRQRM YGLFQSLRQ SFMSGA


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
8K4OAOtherUnclassifiedKSHVHuman gammaherpesvirus 8CXCL1-Gi1/β1/γ13.012024-07-24doi.org/10.1073/pnas.2403217121
8K4O (No Gprot) AOtherUnclassifiedKSHVHuman gammaherpesvirus 8CXCL1-3.012024-07-24doi.org/10.1073/pnas.2403217121
8K4PAOtherUnclassifiedKSHVHuman gammaherpesvirus 8--Gi1/β1/γ12.812024-07-24doi.org/10.1073/pnas.2403217121
8K4P (No Gprot) AOtherUnclassifiedKSHVHuman gammaherpesvirus 8--2.812024-07-24doi.org/10.1073/pnas.2403217121




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