Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:I25 7.4426
2R:R:Y29 16.7925428
3R:R:F33 10.796527
4R:R:N40 4.114509
5R:R:F47 13.11517
6R:R:Y59 6.62407
7R:R:D67 8.6875419
8R:R:M70 4.14517
9R:R:F74 6.516508
10R:R:S82 4.7275424
11R:R:L84 2.325403
12R:R:S97 3.0125405
13R:R:Y102 4.742515
14R:R:Y106 7.99667618
15R:R:F111 6.6225408
16R:R:F112 3.966519
17R:R:S116 7.1525409
18R:R:V124 5.5725408
19R:R:Y137 6.22503
20R:R:W146 5.53409
21R:R:V154 3.7225405
22R:R:Q162 5.952535
23R:R:E174 7.764535
24R:R:E178 4.71402
25R:R:F191 8.405405
26R:R:F195 13.134519
27R:R:F199 6.884517
28R:R:F205 13.81408
29R:R:Y206 7.288509
30R:R:I235 4.8275408
31R:R:F242 4.46143719
32R:R:F243 3.9775417
33R:R:F246 6.525619
34R:R:Y249 8.85507
35R:R:H250 12.022518
36R:R:R253 6.182516
37R:R:Y256 9.07405
38R:R:E278 11.522525
39R:R:N287 6.27667619
40R:R:D291 7.28833619
41R:R:I294 4.565418
42R:R:Y295 13.894519
43R:R:L298 5.218507
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:E278 R:R:Y29 33.454128.06YesYes258
2R:R:E278 R:R:R274 21.71878.14YesNo253
3R:R:F33 R:R:Y29 57.852513.41YesYes278
4R:R:F33 R:R:I78 16.96175.02YesNo277
5R:R:F33 R:R:F74 76.935918.22YesYes078
6R:R:N40 R:R:V288 11.49882.96YesNo098
7R:R:F101 R:R:M70 85.74396.22NoYes077
8R:R:A285 R:R:F101 1002.77NoNo077
9R:R:A285 R:R:F74 99.27194.16NoYes078
10R:R:D67 R:R:M70 32.41554.16YesYes197
11R:R:D291 R:R:D67 37.99675.32YesYes199
12R:R:D291 R:R:Y295 43.115918.39YesYes199
13R:R:V64 R:R:Y295 10.264310.09NoYes199
14R:R:F48 R:R:V64 10.23479.18NoNo049
15R:R:M70 R:R:N287 50.38264.21YesYes179
16R:R:D291 R:R:N287 35.34284.04YesYes199
17R:R:F47 R:R:Y295 23.947526.82YesYes179
18R:R:F47 R:R:L60 20.43256.09YesNo078
19R:R:F101 R:R:Y102 29.87625.16NoYes075
20R:R:Y102 R:R:Y106 30.55634.96YesYes158
21R:R:F191 R:R:Y106 21.312120.63YesYes058
22R:R:F191 R:R:M149 12.57444.98YesNo058
23R:R:M149 R:R:V107 12.04216.09NoNo087
24R:R:V107 R:R:W146 10.65984.9NoYes079
25R:R:I57 R:R:L60 18.77295.71NoNo078
26R:R:C299 R:R:I57 15.42043.27NoNo087
27R:R:C299 R:R:P301 13.74245.65NoNo086
28R:R:D291 R:R:I63 28.16855.6YesNo199
29R:R:F111 R:R:I63 33.23975.02YesNo089
30R:R:F111 R:R:N62 22.05519.67YesNo089
31R:R:N62 R:R:S142 20.63578.94NoNo097
32R:R:I58 R:R:S142 19.4164.64NoNo067
33R:R:I58 R:R:S138 14.08243.1NoNo068
34R:R:F111 R:R:V145 12.87757.87YesNo087
35R:R:I144 R:R:V145 12.74073.07NoNo027
36R:R:I144 R:R:L140 11.34734.28NoNo023
37R:R:L140 R:R:Y137 10.01665.86NoYes033
38R:R:S138 R:R:Y59 10.8528.9NoYes087
39R:R:F246 R:R:N287 20.21819.67YesYes199
40R:R:K77 R:R:S97 29.29961.53NoYes075
41R:R:F74 R:R:K77 30.55262.48YesNo087
42R:R:L84 R:R:S82 15.16174.5YesYes034
43R:R:E174 R:R:N90 21.62637.89YesNo057
44R:R:N90 R:R:V93 24.21362.96NoNo076
45R:R:S97 R:R:V93 25.49624.85YesNo056
46R:R:I158 R:R:R95 11.18463.76NoNo048
47R:R:I158 R:R:L159 14.87341.43NoNo045
48R:R:L159 R:R:P155 18.57331.64NoNo057
49R:R:N156 R:R:P155 29.6844.89NoNo057
50R:R:E178 R:R:N156 33.3582.63YesNo025
51R:R:E178 R:R:H184 43.58163.69YesNo023
52R:R:H184 R:R:N188 47.233419.13NoNo034
53R:R:N188 R:R:Y102 26.61256.98NoYes145
54R:R:M105 R:R:Y106 10.94813.59NoYes088
55R:R:I109 R:R:Y106 20.14786.04NoYes088
56R:R:H250 R:R:Y106 15.48337.62YesYes188
57R:R:F195 R:R:I109 10.09438.79YesNo098
58R:R:F195 R:R:H250 19.327335.07YesYes198
59R:R:F242 R:R:F246 28.24624.29YesYes199
60R:R:D291 R:R:I294 28.9415.6YesYes198
61R:R:F242 R:R:L202 28.8086.09YesNo098
62R:R:L202 R:R:S116 27.51436.01NoYes089
63R:R:F205 R:R:S116 21.810.57YesYes089
64R:R:I294 R:R:L298 31.5214.28YesYes087
65R:R:L298 R:R:R119 16.83614.86YesNo079
66R:R:F242 R:R:F243 16.67713.22YesYes197
67R:R:F243 R:R:V239 20.62833.93YesNo078
68R:R:I235 R:R:R119 10.41583.76YesNo089
69R:R:F205 R:R:Y120 15.6211.35YesNo088
70R:R:V124 R:R:Y120 12.663110.09YesNo088
71R:R:K125 R:R:V124 14.81063.04NoYes068
72R:R:K125 R:R:W128 10.826110.44NoNo064
73R:R:I123 R:R:I209 12.11614.42NoNo088
74R:R:I209 R:R:Y206 14.11948.46NoYes089
75R:R:F195 R:R:F199 10.34565.36YesYes197
76R:R:F236 R:R:V239 12.20485.24NoNo058
77R:R:K277 R:R:R274 40.52862.48NoNo053
78R:R:K277 R:R:Y256 38.026217.91NoYes055
79R:R:Q260 R:R:Y256 25.714313.53NoYes035
80R:R:S259 R:R:Y265 10.37527.63NoNo031
81R:R:K270 R:R:S259 12.94779.18NoNo033
82R:R:K270 R:R:Q260 23.17138.14NoNo033
83R:R:I25 R:R:Y29 24.72748.46YesYes268
84R:R:I25 R:R:R274 21.16433.76YesNo263
85R:R:I78 R:R:S82 14.2823.1NoYes274
86R:R:F111 R:R:V107 10.65243.93YesNo087
87R:R:F246 R:R:M105 12.83313.73YesNo098
88R:R:F246 R:R:I109 10.88158.79YesNo098
89R:R:F195 R:R:F242 18.67316.43YesYes199
90R:R:N188 R:R:R253 24.25064.82NoYes146
91R:R:R253 R:R:Y106 18.15195.14YesYes168
92R:R:F199 R:R:F243 10.13127.5YesYes177
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


PDB Summary
PDB 9J05
Class A
SubFamily Nucleotide
Type P2Y
SubType P2Y14
Species Homo Sapiens
Ligand -
Other Ligand(s) -
Protein Partners -
PDB Resolution 3.2
Date 2025-08-06
D.O.I. To be published
Net Summary
Imin 3
Number of Linked Nodes 262
Number of Links 305
Number of Hubs 43
Number of Links mediated by Hubs 164
Number of Communities 4
Number of Nodes involved in Communities 42
Number of Links involved in Communities 62
Path Summary
Number Of Nodes in MetaPath 93
Number Of Links MetaPath 92
Number of Shortest Paths 64301
Length Of Smallest Path 3
Average Path Length 13.3748
Length of Longest Path 29
Minimum Path Strength 1.215
Average Path Strength 7.19251
Maximum Path Strength 25.455
Minimum Path Correlation 0.7
Average Path Correlation 0.91721
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 5
Average % Of Corr. Nodes 45.327
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 47.9717
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier
SCOP2Family Identifier
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ15391
Sequence
>9J05_Chain_R
ITQQIIPVL YCMVFIAGI LLNGVSGWI FFYVPSSKS FIIYLKNIV 
IADFVMSLT FPFKILGDS GLGPWQLNV FVCRVSAVL FYVNMYVSI 
VFFGLISFD RYYKIVKPL WTSFIQSVS YSKLLSVIV WMLMLLLAV 
PNIILTNQS VREVTQIKC IELKSELGR KWHKASNYI FVAIFWIVF 
LLLIVFYTA ITKKIFKSH SVKKKSSRN IFSIVFVFF VCFVPYHIA 
RIPYTKSQT EAHYSCQSK EILRYMKEF TLLLSAANV CLDPIIYFF 
LCQPFREIL CKK


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9J0FANucleotideP2YP2Y14Homo sapiensNADH-Gi1/β1/γ22.762025-06-04doi.org/10.1038/s41421-025-00799-9
9J0F (No Gprot) ANucleotideP2YP2Y14Homo sapiensNADH-2.762025-06-04doi.org/10.1038/s41421-025-00799-9
9J0IANucleotideP2YP2Y14Homo sapiensUDP-Glucuronic acid-Gi1/β1/γ22.762025-06-04doi.org/10.1038/s41421-025-00799-9
9J0I (No Gprot) ANucleotideP2YP2Y14Homo sapiensUDP-Glucuronic acid-2.762025-06-04doi.org/10.1038/s41421-025-00799-9




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9J05.zip



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