Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:P5 5.7875400
2L:L:R7 6.59420
3L:L:F8 7.7425400
4L:L:?9 6.48410
5R:R:N61 6.344509
6R:R:M74 5.5625407
7R:R:F81 5.9825408
8R:R:L85 5.95439
9R:R:D89 8.312539
10R:R:L91 4.015407
11R:R:V92 6.2625407
12R:R:M97 5.36167617
13R:R:L105 4.488505
14R:R:T107 7.4775444
15R:R:W109 13.3825448
16R:R:Q123 6.578517
17R:R:S128 2.58406
18R:R:V131 3.88408
19R:R:I137 5.035439
20R:R:E140 8.005408
21R:R:F142 7.588508
22R:R:L153 4.75406
23R:R:W166 4.724569
24R:R:Y198 10.5575442
25R:R:E205 5.44524
26R:R:W207 9.39625
27R:R:R213 6.4375424
28R:R:R214 5.5575493
29R:R:Y216 9.4775406
30R:R:F221 9.09406
31R:R:Y225 8.1625408
32R:R:Y236 7.5925409
33R:R:F278 4.8354105
34R:R:W283 6.2675408
35R:R:W287 7.518507
36R:R:V306 4.1454113
37R:R:H315 9.106516
38R:R:W316 4.885405
39R:R:F319 7.71517
40R:R:Y329 4.675439
41R:R:F336 5.365408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:L200 R:R:M190 17.07995.65NoNo012
2R:R:M190 R:R:Y198 18.82323.59NoYes422
3R:R:Y198 R:R:Y201 35.12279.93YesNo023
4R:R:V182 R:R:Y201 42.94526.31NoNo053
5R:R:C203 R:R:V182 44.86475.12NoNo095
6R:R:C116 R:R:C203 20.66087.28NoNo799
7R:R:C116 R:R:L180 60.95663.17NoNo095
8R:R:E205 R:R:L180 60.33983.98YesNo045
9R:R:E205 R:R:R213 20.67344.65YesYes244
10R:R:R213 R:R:W204 13.36693YesNo043
11R:R:C116 R:R:P110 40.66085.65NoNo793
12R:R:D103 R:R:P110 66.87226.44NoNo043
13L:L:Q6 R:R:D103 66.91633.92NoNo004
14L:L:Q6 R:R:Q123 67.11146.4NoYes007
15L:L:?9 R:R:Q123 71.01329.88YesYes107
16L:L:?9 R:R:H315 11.31536.36YesYes106
17R:R:F311 R:R:H315 36.65839.05NoYes046
18L:L:P5 R:R:F311 21.592213YesNo004
19L:L:P5 R:R:T307 16.41915.25YesNo004
20L:L:F8 L:L:R7 22.989311.76YesYes000
21L:L:R7 R:R:E205 44.0784.65YesYes204
22R:R:D294 R:R:R213 10.774113.1NoYes054
23L:L:R7 R:R:L290 20.60426.07YesNo205
24L:L:F8 R:R:W287 29.94347.02YesYes007
25R:R:L290 R:R:W287 31.64253.42NoYes057
26L:L:?9 R:R:F319 60.09446.03YesYes107
27R:R:W109 R:R:Y198 12.372623.15YesYes482
28R:R:F319 R:R:M97 33.74458.71YesYes177
29R:R:M97 R:R:Y50 26.0734.79YesNo077
30R:R:L101 R:R:Y50 24.29223.45NoNo077
31R:R:L101 R:R:L105 22.49848.3NoYes075
32R:R:H38 R:R:L105 13.34172.57NoYes045
33R:R:F221 R:R:W287 28.281910.02YesYes067
34R:R:F221 R:R:Y225 28.91139.28YesYes068
35R:R:L284 R:R:Y225 79.578410.55NoYes058
36R:R:L284 R:R:P285 78.87983.28NoNo059
37R:R:L317 R:R:P285 78.20014.93NoNo079
38R:R:L317 R:R:W316 78.26313.42NoYes075
39R:R:W283 R:R:W287 41.2026.56YesYes087
40R:R:W283 R:R:Y225 53.12785.79YesYes088
41R:R:I53 R:R:W316 78.48968.22NoYes075
42R:R:I53 R:R:M97 78.69734.37NoYes077
43R:R:F54 R:R:M97 19.16937.46NoYes167
44R:R:F54 R:R:M58 18.94273.73NoNo066
45R:R:N321 R:R:W283 23.73829.04NoYes098
46R:R:F278 R:R:N321 19.47777.25YesNo1059
47R:R:F278 R:R:F320 13.12785.36YesNo055
48R:R:F320 R:R:S323 10.97555.28NoNo057
49R:R:C57 R:R:M58 18.2194.86NoNo086
50R:R:C96 R:R:F319 61.07616.98NoYes077
51R:R:C96 R:R:V92 60.5166.83NoYes077
52R:R:S322 R:R:V92 1008.08NoYes097
53R:R:D89 R:R:S322 99.3148.83YesNo099
54R:R:D89 R:R:N61 16.39412.12YesYes099
55R:R:C57 R:R:N61 17.60233.15NoYes089
56R:R:N61 R:R:P326 10.11334.89YesNo099
57R:R:A86 R:R:N61 15.09754.69NoYes099
58R:R:D89 R:R:L85 96.2874.07YesYes399
59R:R:I137 R:R:L85 99.58462.85YesYes399
60R:R:F81 R:R:I137 83.41726.28YesYes089
61R:R:E140 R:R:F81 79.91827YesYes088
62R:R:E140 R:R:T78 34.833212.7YesNo088
63R:R:T76 R:R:T78 33.23473.14NoNo078
64R:R:N79 R:R:T76 31.59858.77NoNo087
65R:R:M74 R:R:N79 29.94975.61YesNo078
66R:R:M74 R:R:N71 24.92767.01YesNo075
67R:R:K70 R:R:N71 23.228415.39NoNo055
68R:R:I67 R:R:K70 18.05545.82NoNo075
69R:R:F336 R:R:I67 16.30598.79YesNo087
70R:R:A86 R:R:C65 12.61171.81NoNo097
71R:R:C65 R:R:L83 10.11331.59NoNo076
72R:R:E140 R:R:L153 50.2149.28YesYes086
73R:R:S126 R:R:V92 16.77166.46NoYes087
74R:R:L91 R:R:S126 15.09756.01YesNo078
75R:R:L91 R:R:W166 11.10133.42YesYes079
76R:R:G93 R:R:M97 55.283.49NoYes077
77R:R:Q123 R:R:S119 14.88365.78YesNo175
78R:R:M118 R:R:S119 12.8323.07NoNo045
79R:R:M118 R:R:T115 10.72374.52NoNo046
80R:R:I224 R:R:W287 32.756510.57NoYes067
81R:R:I224 R:R:S128 33.07113.1NoYes066
82R:R:F132 R:R:S128 12.49213.96NoYes066
83R:R:I224 R:R:V131 16.3313.07NoYes068
84R:R:V131 R:R:W283 22.80683.68YesYes088
85R:R:P228 R:R:V131 15.06613.53NoYes098
86R:R:I137 R:R:Y329 14.09067.25YesYes399
87R:R:I137 R:R:R141 10.49723.76YesNo399
88R:R:L153 R:R:R143 31.39082.43YesNo065
89R:R:F142 R:R:R143 28.08684.28YesNo085
90R:R:F142 R:R:V146 14.266810.49YesNo086
91R:R:K157 R:R:L153 10.98172.82NoYes056
92R:R:I172 R:R:S128 12.49211.55NoYes056
93R:R:D294 R:R:R214 11.57964.76NoYes053
94R:R:L229 R:R:Y225 11.58597.03NoYes068
95R:R:I328 R:R:Y329 10.88114.84NoYes089
96R:R:F311 R:R:V306 14.64442.62NoYes043
97R:R:F336 R:R:N333 10.98173.62YesNo088
98R:R:C203 R:R:P110 26.10459.41NoNo793
99R:R:E205 R:R:W207 18.43935.45YesYes245
100R:R:F319 R:R:H315 31.54819.05YesYes176
101R:R:G93 R:R:V92 54.64443.68NoYes077
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:P2 R:R:W204 14.86 0 No No 0 3 0 1
L:L:N3 R:R:S202 8.94 0 No No 0 4 0 1
L:L:P5 R:R:N104 3.26 0 Yes No 0 4 0 1
L:L:P5 R:R:T307 5.25 0 Yes No 0 4 0 1
L:L:P5 R:R:F311 13 0 Yes No 0 4 0 1
L:L:Q6 R:R:D103 3.92 0 No No 0 4 0 1
L:L:Q6 R:R:Q123 6.4 0 No Yes 0 7 0 1
L:L:R7 R:R:E205 4.65 2 Yes Yes 0 4 0 1
L:L:R7 R:R:T217 3.88 2 Yes No 0 5 0 1
L:L:R7 R:R:L290 6.07 2 Yes No 0 5 0 1
L:L:F8 R:R:V127 9.18 0 Yes No 0 7 0 1
L:L:F8 R:R:W287 7.02 0 Yes Yes 0 7 0 1
L:L:?9 R:R:T100 3.65 1 Yes No 0 6 0 1
L:L:?9 R:R:Q123 9.88 1 Yes Yes 0 7 0 1
L:L:?9 R:R:H315 6.36 1 Yes Yes 0 6 0 1
L:L:?9 R:R:F319 6.03 1 Yes Yes 0 7 0 1
R:R:C96 R:R:F319 6.98 0 No Yes 7 7 2 1
R:R:F319 R:R:M97 8.71 1 Yes Yes 7 7 1 2
R:R:S119 R:R:T99 6.4 1 No No 5 6 2 2
R:R:Q123 R:R:T99 4.25 1 Yes No 7 6 1 2
R:R:H315 R:R:T100 8.21 1 Yes No 6 6 1 1
R:R:F319 R:R:T100 7.78 1 Yes No 7 6 1 1
R:R:D103 R:R:P110 6.44 0 No No 4 3 1 2
R:R:Q123 R:R:S119 5.78 1 Yes No 7 5 1 2
R:R:G120 R:R:Q123 6.58 0 No Yes 5 7 2 1
R:R:E205 R:R:T179 8.47 2 Yes No 4 5 1 2
R:R:T179 R:R:W207 19.41 2 No Yes 5 5 2 2
R:R:E205 R:R:L180 3.98 2 Yes No 4 5 1 2
R:R:E185 R:R:T183 7.06 5 No No 1 3 2 2
R:R:S202 R:R:T183 3.2 5 No No 4 3 1 2
R:R:E185 R:R:S202 8.62 5 No No 1 4 2 1
R:R:A206 R:R:W204 3.89 0 No No 3 3 2 1
R:R:E205 R:R:W207 5.45 2 Yes Yes 4 5 1 2
R:R:E205 R:R:R213 4.65 2 Yes Yes 4 4 1 2
R:R:R213 R:R:W207 5 2 Yes Yes 4 5 2 2
R:R:D294 R:R:R213 13.1 0 No Yes 5 4 2 2
R:R:L290 R:R:T217 4.42 2 No No 5 5 1 1
R:R:D294 R:R:T217 15.9 0 No No 5 5 2 1
R:R:F221 R:R:W287 10.02 0 Yes Yes 6 7 2 1
R:R:I224 R:R:W287 10.57 0 No Yes 6 7 2 1
R:R:W283 R:R:W287 6.56 0 Yes Yes 8 7 2 1
R:R:H315 R:R:L286 12.86 1 Yes No 6 7 1 2
R:R:L290 R:R:W287 3.42 2 No Yes 5 7 1 1
R:R:F311 R:R:H315 9.05 0 No Yes 4 6 1 1
R:R:F319 R:R:H315 9.05 1 Yes Yes 7 6 1 1
L:L:F8 R:R:G124 3.01 0 Yes No 0 5 0 1
R:R:R213 R:R:W204 3 2 Yes No 4 3 2 1
R:R:F311 R:R:V306 2.62 0 No Yes 4 3 1 2
R:R:G124 R:R:M173 1.75 0 No No 5 7 1 2
R:R:T307 R:R:V308 1.59 0 No No 4 3 1 2
R:R:L303 R:R:T307 1.47 0 No No 3 4 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9M0R_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.07
Number of Linked Nodes 285
Number of Links 311
Number of Hubs 41
Number of Links mediated by Hubs 151
Number of Communities 11
Number of Nodes involved in Communities 51
Number of Links involved in Communities 60
Path Summary
Number Of Nodes in MetaPath 102
Number Of Links MetaPath 101
Number of Shortest Paths 46258
Length Of Smallest Path 3
Average Path Length 15.1542
Length of Longest Path 38
Minimum Path Strength 1.435
Average Path Strength 6.33251
Maximum Path Strength 16.425
Minimum Path Correlation 0.7
Average Path Correlation 0.926471
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.44828
Average % Of Corr. Nodes 52.4406
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.0723
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeNH2
PDB ResiduesL:L:?9
Environment DetailsOpen EMBL-EBI Page
CodeNH2
NameAMINO GROUP
Synonyms
Identifier
FormulaH2 N
Molecular Weight16.023
SMILES
PubChem123329
Formal Charge0
Total Atoms3
Total Chiral Atoms0
Total Bonds2
Total Aromatic Bonds0

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9GZQ6
Sequence
>9M0R_nogp_Chain_R
LTFSSYYQH TSPVAAMFI VAYALIFLL CMVGNTLVC FIVLKNRHM 
HTVTNMFIL NLAVSDLLV GIFCMPTTL VDNLITGWP FDNATCKMS 
GLVQGMSVS ASVFTLVAI AVERFRCIV HPFREKLTL RKALVTIAV 
IWALALLIM CPSAVTLTV TREEHHFMV DARNRSYPL YSCWEAWPE 
KGMRRVYTT VLFSHIYLA PLALIVVMY ARIARKLCQ RRARVVHML 
VMVALFFTL SWLPLWALL LLIDYGQLS APQLHLVTV YAFPFAHWL 
AFFNSSANP IIYGYFNEN FRRG


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9M0RAPeptideNeuropeptide FFNPFF1Homo sapiensNeuropeptide-VF-Gi1/β1/γ22.472025-07-23doi.org/10.1016/j.celrep.2025.116160
9M0R (No Gprot) APeptideNeuropeptide FFNPFF1Homo sapiensNeuropeptide-VF-2.472025-07-23doi.org/10.1016/j.celrep.2025.116160
9M2FAPeptideNeuropeptide FFNPFF1Homo sapiensNeuropeptide-FF-Gi1/β1/γ22.932025-07-23doi.org/10.1016/j.celrep.2025.116160
9M2F (No Gprot) APeptideNeuropeptide FFNPFF1Homo sapiensNeuropeptide-FF-2.932025-07-23doi.org/10.1016/j.celrep.2025.116160
9VI9APeptideNeuropeptide FFNPFF1Homo sapiensRFRP-3-Gi1/β1/γ23.022025-12-0310.1093/procel/pwaf090
9VI9 (No Gprot) APeptideNeuropeptide FFNPFF1Homo sapiensRFRP-3-3.022025-12-0310.1093/procel/pwaf090
9VIFAPeptideNeuropeptide FFNPFF1Homo sapiensNeuropeptide-VF-Gi1/β1/γ23.192025-12-0310.1093/procel/pwaf090
9VIF (No Gprot) APeptideNeuropeptide FFNPFF1Homo sapiensNeuropeptide-VF-3.192025-12-0310.1093/procel/pwaf090




You can download a compressed (zip) file with structure(s), 3D outputs (as PyMol and VMD scripts) and numerical data files (as csv and plain text files).

Download 9M0R_nogp.zip



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