Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1L:L:?1 7.078181110
2R:R:K11 3.97405
3R:R:N26 10.34409
4R:R:L28 4.1025406
5R:R:H36 7.26505
6R:R:F46 5.365407
7R:R:M62 5.475417
8R:R:N65 7.16416
9R:R:W74 5.445628
10R:R:W84 7.818506
11R:R:H98 6.014548
12R:R:Y116 5.536557
13R:R:V125 4.1775407
14R:R:W133 4.755449
15R:R:Y149 7.23429735
16R:R:H154 8.53502
17R:R:Y173 4.50429737
18R:R:F182 7.2618
19R:R:Y193 5.18571719
20R:R:R195 4.115465
21R:R:Y197 4.67405
22R:R:M241 4.68418
23R:R:F244 5.86519
24R:R:W248 6.4075818
25R:R:F251 10.1425416
26R:R:F252 10.7525417
27R:R:F276 6.688515
28R:R:W277 9.584514
29R:R:Y280 8.002517
30R:R:S284 3.2275407
31R:R:Y290 5.645419
32R:R:F297 5.6525408
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1L:L:?1 R:R:F276 86.16678.15YesYes105
2R:R:F276 R:R:N65 27.38873.62YesYes156
3R:R:N65 R:R:W277 22.101714.69YesYes164
4R:R:L15 R:R:W277 28.620512.53NoYes064
5R:R:K11 R:R:L15 23.73148.46YesNo056
6R:R:K11 R:R:K7 16.0194.31YesNo054
7R:R:K7 R:R:L8 10.72111.41NoNo044
8R:R:F276 R:R:Y280 64.57736.19YesYes157
9R:R:W277 R:R:Y280 17.147211.58YesYes147
10L:L:?1 R:R:V89 71.472213.71YesNo004
11R:R:V89 R:R:Y173 69.27563.79NoYes047
12R:R:Y149 R:R:Y173 63.84152.98YesYes357
13R:R:T150 R:R:Y149 24.48917.48NoYes035
14R:R:H154 R:R:T150 23.16458.21YesNo023
15R:R:H154 R:R:Y157 39.21627.62YesNo023
16R:R:H161 R:R:Y157 33.61316.53NoNo753
17R:R:H161 R:R:P162 30.89331.53NoNo053
18R:R:D163 R:R:P162 25.29023.22NoNo033
19R:R:D163 R:R:R73 22.47232.38NoNo034
20R:R:L75 R:R:R73 19.64351.21NoNo024
21R:R:L75 R:R:S71 16.80383NoNo024
22R:R:I70 R:R:S71 11.09174.64NoNo054
23R:R:K158 R:R:Y149 28.76763.58NoYes045
24R:R:H154 R:R:K158 23.611513.1YesNo024
25L:L:?1 R:R:W248 1003.81YesYes108
26R:R:N282 R:R:W248 20.40127.91NoYes098
27R:R:C247 R:R:N282 15.85559.45NoNo099
28R:R:C247 R:R:I278 14.31841.64NoNo097
29R:R:I278 R:R:L281 12.77054.28NoNo075
30R:R:I18 R:R:L281 11.21162.85NoNo075
31R:R:M62 R:R:Y280 51.85598.38YesYes177
32R:R:M62 R:R:V57 54.6523.04YesNo077
33R:R:S283 R:R:V57 53.31126.46NoNo097
34R:R:D54 R:R:S283 51.95948.83NoNo099
35R:R:D54 R:R:N26 50.596816.16NoYes099
36R:R:A51 R:R:N26 45.03734.69NoYes099
37R:R:A51 R:R:V29 37.84273.39NoNo099
38R:R:L28 R:R:V29 36.37114.47YesNo069
39R:R:F301 R:R:L28 31.87444.87NoYes076
40R:R:A291 R:R:F301 30.53364.16NoNo077
41R:R:A291 R:R:F297 29.1714.16NoYes078
42R:R:F297 R:R:N44 24.52726.04YesNo088
43R:R:L39 R:R:N44 21.53494.12NoNo088
44R:R:K38 R:R:L39 18.34092.82NoNo058
45R:R:H36 R:R:K38 16.727522.27YesNo055
46R:R:F244 R:R:W248 79.65888.02YesYes198
47R:R:F244 R:R:L99 35.18833.65YesNo098
48R:R:L99 R:R:Y290 34.14183.52NoYes089
49R:R:I102 R:R:Y290 36.58364.84NoYes089
50R:R:F46 R:R:I102 35.17743.77YesNo078
51R:R:D105 R:R:F46 19.2624.78NoYes097
52R:R:D105 R:R:Y116 16.1284.6NoYes597
53L:L:?1 R:R:T93 14.4713.7YesNo106
54R:R:S136 R:R:T93 13.08667.99NoNo086
55R:R:A94 R:R:S136 10.71563.42NoNo078
56R:R:S140 R:R:V89 10.96093.23NoNo074
57L:L:?1 R:R:F167 15.70283.06YesNo004
58R:R:F167 R:R:N85 21.8519.67NoNo044
59R:R:N85 R:R:W84 15.10335.65NoYes046
60R:R:F64 R:R:W84 15.762811.02NoYes046
61R:R:F64 R:R:F83 10.68843.22NoNo044
62R:R:N65 R:R:W84 17.67054.52YesYes066
63R:R:W74 R:R:W84 14.4225.62YesYes086
64R:R:F244 R:R:M241 47.90974.98YesYes198
65R:R:M241 R:R:Y193 45.1793.59YesYes189
66R:R:S103 R:R:Y193 17.49066.36NoYes099
67R:R:S103 R:R:T192 15.93726.4NoNo097
68R:R:I120 R:R:Y116 11.44067.25NoYes067
69R:R:F182 R:R:W248 10.54124.01YesYes188
70R:R:F182 R:R:W183 12.53073.01YesNo084
71L:L:?1 R:R:F252 10.68297.13YesYes107
72R:R:F182 R:R:F252 16.329619.29YesYes187
73R:R:L237 R:R:Y193 16.1284.69NoYes089
74R:R:I240 R:R:Y193 14.16043.63NoYes089
75R:R:L237 R:R:Y197 12.97765.86NoYes085
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
L:L:?1 R:R:V89 13.71 1 Yes No 0 4 0 1
L:L:?1 R:R:S92 7.54 1 Yes No 0 6 0 1
L:L:?1 R:R:T93 3.7 1 Yes No 0 6 0 1
L:L:?1 R:R:F167 3.06 1 Yes No 0 4 0 1
L:L:?1 R:R:S177 5.03 1 Yes No 0 5 0 1
L:L:?1 R:R:S181 7.54 1 Yes No 0 6 0 1
L:L:?1 R:R:W248 3.81 1 Yes Yes 0 8 0 1
L:L:?1 R:R:F251 14.27 1 Yes Yes 0 6 0 1
L:L:?1 R:R:F252 7.13 1 Yes Yes 0 7 0 1
L:L:?1 R:R:Y255 3.92 1 Yes No 0 6 0 1
L:L:?1 R:R:F276 8.15 1 Yes Yes 0 5 0 1
R:R:F276 R:R:N65 3.62 1 Yes Yes 5 6 1 2
R:R:N65 R:R:Y280 5.81 1 Yes Yes 6 7 2 2
R:R:F167 R:R:N85 9.67 0 No No 4 4 1 2
R:R:S140 R:R:V89 3.23 0 No No 7 4 2 1
R:R:V89 R:R:Y173 3.79 0 No Yes 4 7 1 2
R:R:S92 R:R:W248 4.94 1 No Yes 6 8 1 1
R:R:S136 R:R:T93 7.99 0 No No 8 6 2 1
R:R:S181 R:R:T93 7.99 1 No No 6 6 1 1
R:R:I96 R:R:W248 11.74 0 No Yes 8 8 2 1
R:R:F167 R:R:V169 3.93 0 No No 4 3 1 2
R:R:V169 R:R:Y173 12.62 0 No Yes 3 7 2 2
R:R:V169 R:R:Y255 6.31 0 No No 3 6 2 1
R:R:S177 R:R:S181 3.26 1 No No 5 6 1 1
R:R:F182 R:R:F244 6.43 1 Yes Yes 8 9 2 2
R:R:F182 R:R:W248 4.01 1 Yes Yes 8 8 2 1
R:R:F182 R:R:F252 19.29 1 Yes Yes 8 7 2 1
R:R:F244 R:R:W248 8.02 1 Yes Yes 9 8 2 1
R:R:F252 R:R:W248 8.02 1 Yes Yes 7 8 1 1
R:R:N282 R:R:W248 7.91 0 No Yes 9 8 2 1
R:R:F251 R:R:F252 8.57 1 Yes Yes 6 7 1 1
R:R:F251 R:R:L275 4.87 1 Yes No 6 5 1 2
R:R:F251 R:R:F276 12.86 1 Yes Yes 6 5 1 1
R:R:F276 R:R:Y280 6.19 1 Yes Yes 5 7 1 2
R:R:G279 R:R:W248 2.81 0 No Yes 7 8 2 1
R:R:A174 R:R:Y255 2.67 0 No No 5 6 2 1
R:R:F276 R:R:V272 2.62 1 Yes No 5 4 1 2

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 9M57_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 3.04
Number of Linked Nodes 252
Number of Links 279
Number of Hubs 32
Number of Links mediated by Hubs 135
Number of Communities 7
Number of Nodes involved in Communities 43
Number of Links involved in Communities 58
Path Summary
Number Of Nodes in MetaPath 76
Number Of Links MetaPath 75
Number of Shortest Paths 43484
Length Of Smallest Path 3
Average Path Length 13.0216
Length of Longest Path 38
Minimum Path Strength 1.42
Average Path Strength 6.17249
Maximum Path Strength 16.595
Minimum Path Correlation 0.7
Average Path Correlation 0.921834
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 3.125
Average % Of Corr. Nodes 47.8562
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 45.7286
Maximum Path Hubs % 100

Details about the values in these tables can be found in the corresponding documentation page .
CodeOTR
PDB ResiduesL:L:?1
Environment DetailsOpen EMBL-EBI Page
CodeOTR
Name4-(2R-AMINO-1-HYDROXYETHYL)PHENOL
SynonymsR-OCTOPAMINE
Identifier
FormulaC8 H11 N O2
Molecular Weight153.178
SMILES
PubChem440266
Formal Charge0
Total Atoms22
Total Chiral Atoms1
Total Bonds22
Total Aromatic Bonds6

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtB7Q337
Sequence
>9M57_nogp_Chain_R
LKLVLKTLA LVTIISSAV FGNLLVVTS VIRHHKLRI TTNYFIVSL 
ALADTLVAL FAMTFNASV TISGRWLFN QTVCDFWNS CDVLFSTAS 
IMHLCCISV DRYYAIIKP LEYPTKITG RTVAIMLTC AWVSSGLIS 
FIPIFLGWY TTNEHLVYK VEHPDECIF VVNKPYAII SSSVSFWIP 
CCIMLFTYW RIYVEATRQ EKMLCKAAK TLGIIMGAF ILCWLPFFL 
WYVSITMLV VDLLFWIGY LNSSLNPVI YAYFNREFR QAFKETLQA 
I


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
9M55AAmineAdrenergicOct-Beta2Ixodes scapularisDPMF-chim(NtGi1-Gs)/β1/γ23.392025-12-1710.1093/pnasnexus/pgaf376
9M55 (No Gprot) AAmineAdrenergicOct-Beta2Ixodes scapularisDPMF-3.392025-12-1710.1093/pnasnexus/pgaf376
9M57AAmineAdrenergicOct-Beta2Ixodes scapularisOctopamine-chim(NtGi1-Gs)/β1/γ23.652025-12-1710.1093/pnasnexus/pgaf376
9M57 (No Gprot) AAmineAdrenergicOct-Beta2Ixodes scapularisOctopamine-3.652025-12-1710.1093/pnasnexus/pgaf376




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Download 9M57_nogp.zip



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