Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:G45 2.4825408
2R:R:N49 7.165409
3R:R:Q63 5.22448
4R:R:F69 5.975629
5R:R:N72 8.1775439
6R:R:D77 9.065419
7R:R:L120 3.825405
8R:R:H131 8.475619
9R:R:N137 9.4325429
10R:R:Y139 5.68286727
11R:R:L140 5.1925426
12R:R:R144 5427
13R:R:Y153 7.31429726
14R:R:W166 8.71438
15R:R:Q204 6.5375417
16R:R:L208 5.078518
17R:R:Y212 6.33619
18R:R:F293 7.86167619
19R:R:L300 4.576556
20R:R:S321 3.6425456
21R:R:L328 4.8025419
22R:R:N332 7.65519
23R:R:Y336 9.87419
24R:R:W338 7.475475
25R:R:F343 7.22667649
26W:W:?1 7.93444900
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:A48 R:R:G45 16.57981.95NoYes098
2R:R:A48 R:R:P333 17.66593.74NoNo099
3R:R:N49 R:R:P333 46.123814.66YesNo099
4R:R:C74 R:R:N49 30.3243.15NoYes089
5R:R:C74 R:R:V52 29.31086.83NoNo089
6R:R:P333 R:R:V52 30.96913.53NoNo099
7R:R:D77 R:R:N49 79.66616.73YesYes099
8R:R:F343 R:R:V52 57.95822.62YesNo099
9R:R:F343 R:R:L55 27.65614.87YesNo098
10R:R:F343 R:R:Q63 23.024.68YesYes498
11R:R:L55 R:R:S346 21.1439.01NoNo088
12R:R:F59 R:R:S346 18.824910.57NoNo088
13R:R:L62 R:R:Q63 11.81622.66NoYes098
14R:R:D77 R:R:N332 10014.81YesYes199
15R:R:H131 R:R:N332 87.38210.2YesYes199
16R:R:H131 R:R:L208 37.55883.86YesYes198
17R:R:L208 R:R:Q204 32.53643.99YesYes187
18R:R:C132 R:R:Q204 84.37887.63NoYes077
19R:R:C132 R:R:L207 82.7976.35NoNo075
20R:R:C211 R:R:L207 81.20793.17NoNo075
21R:R:C211 R:R:Y139 79.61156.72NoYes077
22R:R:L140 R:R:Y139 46.69613.52YesYes267
23R:R:L140 R:R:Y153 43.9377.03YesYes266
24R:R:F69 R:R:Y153 24.26295.16YesYes296
25R:R:F293 R:R:H131 40.146510.18YesYes199
26R:R:F293 R:R:Q204 54.980510.54YesYes197
27R:R:L328 R:R:N332 37.88684.12YesYes199
28R:R:F293 R:R:L328 37.75563.65YesYes199
29R:R:F69 R:R:L162 15.28234.87YesNo097
30R:R:L162 R:R:N72 13.365210.98NoYes079
31R:R:C326 R:R:W84 26.32946.53NoNo056
32R:R:C326 R:R:V80 30.68853.42NoNo059
33R:R:S329 R:R:V80 54.9048.08NoNo099
34R:R:S127 R:R:S329 25.69164.89NoNo199
35R:R:L120 R:R:W84 20.22459.11YesNo056
36R:R:G123 R:R:L122 18.74481.71NoNo066
37R:R:G123 R:R:V80 23.3591.84NoNo069
38R:R:H131 R:R:L289 18.79945.14YesNo098
39R:R:L208 R:R:Y212 19.49195.86YesYes189
40R:R:L289 R:R:Y212 12.55248.21NoYes089
41R:R:T143 R:R:Y139 10.700912.48NoYes287
42R:R:I215 R:R:Y139 10.91233.63NoYes097
43R:R:L201 R:R:T297 25.17044.42NoNo056
44R:R:F293 R:R:T297 26.4469.08YesNo096
45R:R:L201 R:R:L300 21.83914.15NoYes056
46R:R:C290 R:R:Y212 14.06134.03NoYes089
47R:R:V286 R:R:Y212 14.09056.31NoYes089
48R:R:V286 W:W:?1 12.83675.6NoYes080
49R:R:C290 W:W:?1 14.06496.96NoYes080
50R:R:I142 R:R:R218 14.50231.25NoNo097
51R:R:L300 R:R:S321 15.39163YesYes566
52R:R:S321 R:R:V303 11.33874.85YesNo065
53R:R:D77 R:R:S329 31.3817.36YesNo199
54R:R:N332 R:R:S127 26.58824.47YesNo199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:C290 R:R:L209 3.17 0 No No 8 4 1 2
R:R:V286 R:R:Y212 6.31 0 No Yes 8 9 1 2
R:R:C290 R:R:Y212 4.03 0 No Yes 8 9 1 2
R:R:L213 W:W:?1 5.2 0 No Yes 4 0 1 0
R:R:V216 W:W:?1 13.07 0 No Yes 6 0 1 0
R:R:V219 W:W:?1 14 0 No Yes 8 0 1 0
R:R:R220 W:W:?1 4.57 0 No Yes 6 0 1 0
R:R:R280 R:R:S282 5.27 0 No No 5 9 2 1
R:R:S282 W:W:?1 2.82 0 No Yes 9 0 1 0
R:R:G283 W:W:?1 9.65 0 No Yes 7 0 1 0
R:R:V286 W:W:?1 5.6 0 No Yes 8 0 1 0
R:R:C291 R:R:L287 3.17 0 No No 6 6 2 1
R:R:L287 W:W:?1 9.54 0 No Yes 6 0 1 0
R:R:C290 W:W:?1 6.96 0 No Yes 8 0 1 0
R:R:L284 R:R:L287 2.77 0 No No 7 6 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7EJX_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.82
Number of Linked Nodes 204
Number of Links 231
Number of Hubs 26
Number of Links mediated by Hubs 104
Number of Communities 7
Number of Nodes involved in Communities 41
Number of Links involved in Communities 55
Path Summary
Number Of Nodes in MetaPath 55
Number Of Links MetaPath 54
Number of Shortest Paths 46918
Length Of Smallest Path 3
Average Path Length 14.5033
Length of Longest Path 26
Minimum Path Strength 1.605
Average Path Strength 6.21868
Maximum Path Strength 13.665
Minimum Path Correlation 0.7
Average Path Correlation 0.915296
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.7619
Average % Of Corr. Nodes 39.476
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 44.698
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process
Gene OntologyCellular Component
SCOP2Domain Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
SCOP2Family Identifier• Transducin (heterotrimeric G protein), gamma chain   • Ras-like P-loop GTPases
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeJ5F
PDB ResiduesW:W:?1
Environment DetailsOpen EMBL-EBI Page
CodeJ5F
Name(1R,2R)-N-[(2S,3S)-2-azanyl-3-methyl-pentyl]-N-[4-(4-propylphenyl)phenyl]-2-pyridin-2-yl-cyclopropane-1-carboxamide
Synonyms
Identifier
FormulaC30 H37 N3 O
Molecular Weight455.634
SMILES
PubChem58466521
Formal Charge0
Total Atoms71
Total Chiral Atoms4
Total Bonds74
Total Aromatic Bonds18

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9GZN0
Sequence
>7EJX_nogp_Chain_R
LYSGLAIGG TLANGMVIY LVSSFRKLQ TTSNAFIVN GCAADLSVC 
ALWMPRLLR GGLLGLGLT VSLLSHCLV ALNRYLLIT RAPATYQAL 
YQRRHTAGM LALSWALAL GLVLLLPPW AHYPALLAA AALLAQTAL 
LLHCYLGIV RRVRVSVKR VSVRLSGLS VLLLCCVFL LATQPLVWV 
SLASGFSLP VPWGVQAAS WLLCCALSA LNPLLYTWR NEEFRRSVR 
SVLP


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7EJXAOrphanOrphanGPR88Homo sapiens-(1R;2R)-2-PCCAGi1/β1/γ22.42022-04-13doi.org/10.1038/s41467-022-30081-5
7EJX (No Gprot) AOrphanOrphanGPR88Homo sapiens-(1R;2R)-2-PCCA2.42022-04-13doi.org/10.1038/s41467-022-30081-5
7WZ4AOrphanOrphanGPR88Homo sapiens--Gi1/β1/γ232022-10-26doi.org/10.1038/s41467-022-30081-5
7WZ4 (No Gprot) AOrphanOrphanGPR88Homo sapiens--32022-10-26doi.org/10.1038/s41467-022-30081-5




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Download 7EJX_nogp.zip



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