Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: hub id, click on each number to highlight the corresponding hub in the 3D visualization.

Hub: the hub being considered.

Avg Int. Strength: the average interaction strength of all the links of the corresponding hub.

Num Of Links: the number of links of the corresponding hub.

Community: the id of the community the link belong to, otherwise 0.

ConSurf: this column reports the ConSurf conservation grades of each hub.

Index Hub Avg Int. Strength Num Of Links Community ConSurf
1R:R:G45 2.4825408
2R:R:N49 7.165409
3R:R:Q63 5.22448
4R:R:F69 5.975629
5R:R:N72 8.1775439
6R:R:D77 9.065419
7R:R:L120 3.825405
8R:R:H131 8.475619
9R:R:N137 9.4325429
10R:R:Y139 5.68286727
11R:R:L140 5.1925426
12R:R:R144 5427
13R:R:Y153 7.31429726
14R:R:W166 8.71438
15R:R:Q204 6.5375417
16R:R:L208 5.078518
17R:R:Y212 6.33619
18R:R:F293 7.86167619
19R:R:L300 4.576556
20R:R:S321 3.6425456
21R:R:L328 4.8025419
22R:R:N332 7.65519
23R:R:Y336 9.87419
24R:R:W338 7.475475
25R:R:F343 7.22667649
26W:W:?1 7.93444900
   

Color ConSurf Grade
      No Conservation data available
      1
      2
      3
      4
      5
      6
      7
      8
      9

Index: link id, click on each number to highlight the corresponding link in the 3D visualization.

Node1 Node2: the two nodes of the corresponding link.

Recurrence: the relative Recurrence in the pool of shortest paths.

Int. Strength: the interaction strength between the two nodes.

Hub1?, Hub2?: "Yes" if the corresponding node has more than 3 links, otherwise "No".

Community: the id of the community the link belong to, otherwise 0.

ConSurf1, ConSurf2: these columns report the ConSurf conservation grades of the two nodes involved in a link.

Index Node1 Node2 Recurrence Int. Strength Hub1? Hub2? Community ConSurf1 ConSurf2
1R:R:A48 R:R:G45 16.57981.95NoYes098
2R:R:A48 R:R:P333 17.66593.74NoNo099
3R:R:N49 R:R:P333 46.123814.66YesNo099
4R:R:C74 R:R:N49 30.3243.15NoYes089
5R:R:C74 R:R:V52 29.31086.83NoNo089
6R:R:P333 R:R:V52 30.96913.53NoNo099
7R:R:D77 R:R:N49 79.66616.73YesYes099
8R:R:F343 R:R:V52 57.95822.62YesNo099
9R:R:F343 R:R:L55 27.65614.87YesNo098
10R:R:F343 R:R:Q63 23.024.68YesYes498
11R:R:L55 R:R:S346 21.1439.01NoNo088
12R:R:F59 R:R:S346 18.824910.57NoNo088
13R:R:L62 R:R:Q63 11.81622.66NoYes098
14R:R:D77 R:R:N332 10014.81YesYes199
15R:R:H131 R:R:N332 87.38210.2YesYes199
16R:R:H131 R:R:L208 37.55883.86YesYes198
17R:R:L208 R:R:Q204 32.53643.99YesYes187
18R:R:C132 R:R:Q204 84.37887.63NoYes077
19R:R:C132 R:R:L207 82.7976.35NoNo075
20R:R:C211 R:R:L207 81.20793.17NoNo075
21R:R:C211 R:R:Y139 79.61156.72NoYes077
22R:R:L140 R:R:Y139 46.69613.52YesYes267
23R:R:L140 R:R:Y153 43.9377.03YesYes266
24R:R:F69 R:R:Y153 24.26295.16YesYes296
25R:R:F293 R:R:H131 40.146510.18YesYes199
26R:R:F293 R:R:Q204 54.980510.54YesYes197
27R:R:L328 R:R:N332 37.88684.12YesYes199
28R:R:F293 R:R:L328 37.75563.65YesYes199
29R:R:F69 R:R:L162 15.28234.87YesNo097
30R:R:L162 R:R:N72 13.365210.98NoYes079
31R:R:C326 R:R:W84 26.32946.53NoNo056
32R:R:C326 R:R:V80 30.68853.42NoNo059
33R:R:S329 R:R:V80 54.9048.08NoNo099
34R:R:S127 R:R:S329 25.69164.89NoNo199
35R:R:L120 R:R:W84 20.22459.11YesNo056
36R:R:G123 R:R:L122 18.74481.71NoNo066
37R:R:G123 R:R:V80 23.3591.84NoNo069
38R:R:H131 R:R:L289 18.79945.14YesNo098
39R:R:L208 R:R:Y212 19.49195.86YesYes189
40R:R:L289 R:R:Y212 12.55248.21NoYes089
41R:R:T143 R:R:Y139 10.700912.48NoYes287
42R:R:I215 R:R:Y139 10.91233.63NoYes097
43R:R:L201 R:R:T297 25.17044.42NoNo056
44R:R:F293 R:R:T297 26.4469.08YesNo096
45R:R:L201 R:R:L300 21.83914.15NoYes056
46R:R:C290 R:R:Y212 14.06134.03NoYes089
47R:R:V286 R:R:Y212 14.09056.31NoYes089
48R:R:V286 W:W:?1 12.83675.6NoYes080
49R:R:C290 W:W:?1 14.06496.96NoYes080
50R:R:I142 R:R:R218 14.50231.25NoNo097
51R:R:L300 R:R:S321 15.39163YesYes566
52R:R:S321 R:R:V303 11.33874.85YesNo065
53R:R:D77 R:R:S329 31.3817.36YesNo199
54R:R:N332 R:R:S127 26.58824.47YesNo199
Download PSN data

2D representation of the global metapath, ligand(s) interactions and
histograms of path distribution according to several parameters
(click on the image to enlarge it 🔍):

A 2D representation of the global communication in the network.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Number of shortest communication paths as a function of the average residue correlation.

Number of shortest communication paths as a function of the average interaction strength of their links.

Number of shortest communication paths as a function of the % of hub nodes in each path.

Number of shortest communication paths as a function of the number of nodes in each path.

Number of shortest communication paths as a function of the % of correlated nodes in each path.


2D representation of the interactions of this orthosteric/allosteric ligand.


Links and nodes colored according to ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  

Node1 Node2 LinkStrength Comm IsNode1Hub? IsNode2Hub? Node1Cons Node2Cons Node1Shell Node2Shell
R:R:C290 R:R:L209 3.17 0 No No 8 4 1 2
R:R:V286 R:R:Y212 6.31 0 No Yes 8 9 1 2
R:R:C290 R:R:Y212 4.03 0 No Yes 8 9 1 2
R:R:L213 W:W:?1 5.2 0 No Yes 4 0 1 0
R:R:V216 W:W:?1 13.07 0 No Yes 6 0 1 0
R:R:V219 W:W:?1 14 0 No Yes 8 0 1 0
R:R:R220 W:W:?1 4.57 0 No Yes 6 0 1 0
R:R:R280 R:R:S282 5.27 0 No No 5 9 2 1
R:R:S282 W:W:?1 2.82 0 No Yes 9 0 1 0
R:R:G283 W:W:?1 9.65 0 No Yes 7 0 1 0
R:R:V286 W:W:?1 5.6 0 No Yes 8 0 1 0
R:R:C291 R:R:L287 3.17 0 No No 6 6 2 1
R:R:L287 W:W:?1 9.54 0 No Yes 6 0 1 0
R:R:C290 W:W:?1 6.96 0 No Yes 8 0 1 0
R:R:L284 R:R:L287 2.77 0 No No 7 6 2 1

Location and physicochemical properties of the interaction partners of this ligand

Interactions of this ligand

Similarities between the interactions of this ligand and those of other networks

PDB Summary
PDB 7EJX_nogp
Class
SubFamily
Type
SubType
Species
Ligand
Other Ligand(s)
Protein Partners
PDB Resolution
Date
D.O.I.
Net Summary
Imin 2.82
Number of Linked Nodes 204
Number of Links 231
Number of Hubs 26
Number of Links mediated by Hubs 104
Number of Communities 7
Number of Nodes involved in Communities 41
Number of Links involved in Communities 55
Path Summary
Number Of Nodes in MetaPath 55
Number Of Links MetaPath 54
Number of Shortest Paths 46918
Length Of Smallest Path 3
Average Path Length 14.5033
Length of Longest Path 26
Minimum Path Strength 1.605
Average Path Strength 6.21868
Maximum Path Strength 13.665
Minimum Path Correlation 0.7
Average Path Correlation 0.915287
Maximum Path Correlation 0.99
Minimum % Of Corr. Nodes 4.7619
Average % Of Corr. Nodes 39.45
Maximum % Of Corr. Nodes 100
Minimum Path Hubs % 0
Average Path Hubs % 44.698
Maximum Path Hubs % 100
AnnotationTypeLinks
Gene OntologyMolecular Function
Gene OntologyBiological Process• multicellular organismal process   • system process   • nervous system process   • biological regulation   • action potential   • transmission of nerve impulse   • cell communication   • neuronal action potential   • cellular process   • regulation of biological quality   • regulation of membrane potential   • behavior   • locomotory behavior   • cellular response to stimulus   • response to light stimulus   • response to stimulus   • cellular response to light stimulus   • response to radiation   • response to abiotic stimulus   • cellular response to radiation   • cellular response to abiotic stimulus   • cellular response to environmental stimulus   • phototransduction   • detection of light stimulus   • detection of external stimulus   • regulation of biological process   • regulation of cellular process   • signaling   • response to external stimulus   • detection of abiotic stimulus   • detection of stimulus   • signal transduction   • G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • learning   • learning or memory   • motor learning   • cognition   • neuromuscular process   • neuromuscular process controlling balance   • membrane-bounded organelle   • cell projection   • cellular anatomical structure   • organelle   • cilium   • plasma membrane bounded cell projection   • cell periphery   • plasma membrane   • membrane   • intracellular anatomical structure   • cytoplasm   • intracellular organelle   • nucleus   • intracellular membrane-bounded organelle
Gene OntologyCellular Component• membrane-bounded organelle   • cell projection   • cellular anatomical structure   • organelle   • cilium   • plasma membrane bounded cell projection   • cell periphery   • plasma membrane   • membrane   • intracellular anatomical structure   • cytoplasm   • intracellular organelle   • nucleus   • intracellular membrane-bounded organelle   • ciliary membrane   • bounding membrane of organelle   • plasma membrane region   • organelle membrane   • cell projection membrane   • D2 dopamine receptor binding   • protein binding   • binding   • signaling receptor binding   • G protein-coupled receptor binding   • dopamine receptor binding   • phosphorus-oxygen lyase activity   • enzyme regulator activity   • cyclase regulator activity   • molecular function regulator activity   • cyclase activity   • adenylate cyclase regulator activity   • lyase activity   • catalytic activity   • adenylate cyclase activity   • guanyl nucleotide binding   • GTP binding   • nucleotide binding   • guanyl ribonucleotide binding   • purine ribonucleotide binding   • purine ribonucleoside triphosphate binding   • nucleoside phosphate binding   • ion binding   • purine nucleotide binding   • anion binding   • heterocyclic compound binding   • carbohydrate derivative binding   • ribonucleotide binding   • small molecule binding   • cation binding   • magnesium ion binding   • metal ion binding   • GDP binding   • G protein-coupled serotonin receptor binding   • protein-containing complex binding   • G-protein beta/gamma-subunit complex binding   • pyrophosphatase activity   • GTPase activity   • G protein activity   • ribonucleoside triphosphate phosphatase activity   • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides   • hydrolase activity   • hydrolase activity, acting on acid anhydrides   • cellular response to stimulus   • regulation of biological process   • regulation of cellular process   • response to stimulus   • signaling   • biological regulation   • adenylate cyclase-inhibiting serotonin receptor signaling pathway   • G protein-coupled serotonin receptor signaling pathway   • cell communication   • adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway   • adenylate cyclase-modulating G protein-coupled receptor signaling pathway   • G protein-coupled receptor signaling pathway   • cellular process   • signal transduction   • response to hormone   • response to chemical   • response to endogenous stimulus   • response to peptide hormone   • response to oxygen-containing compound   • response to nitrogen compound   • cell division   • leukocyte migration   • immune system process   • mononuclear cell migration   • lymphocyte migration   • cell migration   • T cell migration   • cell motility   • regulation of steroid biosynthetic process   • regulation of cholesterol biosynthetic process   • regulation of cholesterol metabolic process   • steroid metabolic process   • regulation of lipid metabolic process   • sterol metabolic process   • positive regulation of biological process   • cholesterol metabolic process   • lipid biosynthetic process   • alcohol metabolic process   • regulation of primary metabolic process   • positive regulation of metabolic process   • regulation of small molecule metabolic process   • positive regulation of biosynthetic process   • positive regulation of lipid metabolic process   • small molecule metabolic process   • steroid biosynthetic process   • positive regulation of cellular process   • regulation of biosynthetic process   • secondary alcohol biosynthetic process   • regulation of alcohol biosynthetic process   • small molecule biosynthetic process   • regulation of steroid metabolic process   • cholesterol biosynthetic process   • positive regulation of cholesterol biosynthetic process   • primary metabolic process   • secondary alcohol metabolic process   • positive regulation of steroid biosynthetic process   • biosynthetic process   • sterol biosynthetic process   • positive regulation of lipid biosynthetic process   • regulation of sterol biosynthetic process   • alcohol biosynthetic process   • positive regulation of cholesterol metabolic process   • positive regulation of steroid metabolic process   • metabolic process   • regulation of lipid biosynthetic process   • positive regulation of small molecule metabolic process   • regulation of metabolic process   • positive regulation of alcohol biosynthetic process   • positive regulation of sterol biosynthetic process   • lipid metabolic process   • regulation of cytoskeleton organization   • regulation of cellular component organization   • microtubule cytoskeleton organization   • regulation of mitotic spindle organization   • mitotic cell cycle   • cellular component organization   • cell cycle   • cellular component organization or biogenesis   • regulation of cell cycle   • microtubule cytoskeleton organization involved in mitosis   • spindle organization   • cell cycle process   • regulation of cell cycle process   • regulation of microtubule-based process   • regulation of spindle organization   • regulation of organelle organization   • mitotic spindle organization   • organelle organization   • mitotic cell cycle process   • microtubule-based process   • cytoskeleton organization   • regulation of microtubule cytoskeleton organization   • protein localization   • positive regulation of protein localization to cell periphery   • regulation of localization   • protein localization to cell periphery   • cellular localization   • regulation of protein localization   • positive regulation of protein localization to cell cortex   • regulation of protein localization to cell periphery   • localization   • regulation of cellular localization   • regulation of protein localization to cell cortex   • cellular macromolecule localization   • macromolecule localization   • positive regulation of protein localization   • protein localization to cell cortex   • response to ketone   • response to prostaglandin   • response to lipid   • response to alcohol   • response to prostaglandin E   • cellular response to forskolin   • cellular response to oxygen-containing compound   • cellular response to chemical stimulus   • cellular response to alcohol   • response to forskolin   • cellular response to lipid   • cellular response to ketone   • midbody   • membrane-enclosed lumen   • intracellular membraneless organelle   • nucleolus   • intracellular organelle lumen   • organelle lumen   • membraneless organelle   • nuclear lumen   • cell cortex   • protein-containing complex   • extrinsic component of plasma membrane   • catalytic complex   • plasma membrane protein complex   • cytoplasmic side of membrane   • membrane protein complex   • heterotrimeric G-protein complex   • side of membrane   • cytoplasmic side of plasma membrane   • GTPase complex   • extrinsic component of membrane   • extrinsic component of cytoplasmic side of plasma membrane   • extracellular exosome   • extracellular vesicle   • extracellular organelle   • extracellular region   • extracellular space   • vesicle   • extracellular membrane-bounded organelle   • centrosome   • microtubule organizing center   • cytoskeleton   • microtubule cytoskeleton   • centriolar satellite   • cytosol   • nucleoplasm   • vacuolar membrane   • lytic vacuole   • vacuole   • lytic vacuole membrane   • lysosomal membrane   • lysosome   • Golgi apparatus   • endomembrane system   • ciliary basal body   • enzyme binding   • GTPase binding   • signaling receptor complex adaptor activity   • protein-macromolecule adaptor activity   • molecular adaptor activity   • signaling adaptor activity   • multicellular organismal process   • system process   • sensory perception of chemical stimulus   • sensory perception   • nervous system process   • sensory perception of taste   • developmental process   • sensory organ development   • eye development   • animal organ development   • retina development in camera-type eye   • visual system development   • multicellular organism development   • camera-type eye development   • anatomical structure development   • sensory system development   • system development   • cell population proliferation   • cellular response to prostaglandin stimulus   • cellular response to endogenous stimulus   • cellular response to prostaglandin E stimulus   • cellular response to hormone stimulus   • small GTPase-mediated signal transduction   • Ras protein signal transduction   • intracellular signal transduction   • intracellular signaling cassette   • phospholipase C-activating G protein-coupled receptor signaling pathway   • cellular response to nitrogen compound   • response to dopamine   • cellular response to dopamine   • response to monoamine   • response to catecholamine   • adenylate cyclase-activating dopamine receptor signaling pathway   • cellular response to catecholamine stimulus   • G protein-coupled dopamine receptor signaling pathway   • adenylate cyclase-activating G protein-coupled receptor signaling pathway   • cellular response to monoamine stimulus   • synaptic signaling   • cellular response to acetylcholine   • cell-cell signaling   • acetylcholine receptor signaling pathway   • postsynaptic signal transduction   • G protein-coupled acetylcholine receptor signaling pathway   • response to acetylcholine   • non-motile cilium   • 9+0 non-motile cilium   • neuron projection   • photoreceptor disc membrane   • photoreceptor outer segment   • photoreceptor cell cilium   • synapse   • cell junction   • G-protein beta-subunit binding   • fibroblast proliferation
SCOP2Domain Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
SCOP2Family Identifier• Ras-like P-loop GTPases   • Transducin (heterotrimeric G protein), gamma chain
Membrane Protein Annotations-• Orientations of Proteins in Membranes database (OPM)   • Protein Data Bank of Transmembrane Proteins (PDBTM)   • MemProtMD


Details about the values in these tables can be found in the corresponding documentation page .
CodeJ5F
PDB ResiduesW:W:?1
Environment DetailsOpen EMBL-EBI Page
CodeJ5F
Name(1R,2R)-N-[(2S,3S)-2-azanyl-3-methyl-pentyl]-N-[4-(4-propylphenyl)phenyl]-2-pyridin-2-yl-cyclopropane-1-carboxamide
Synonyms
Identifier
FormulaC30 H37 N3 O
Molecular Weight455.634
SMILES
PubChem58466521
Formal Charge0
Total Atoms71
Total Chiral Atoms4
Total Bonds74
Total Aromatic Bonds18

PDBsumOpen PDBsum Page
ChainR
ProteinReceptor
UniProtQ9GZN0
Sequence
>7EJX_nogp_Chain_R
LYSGLAIGG TLANGMVIY LVSSFRKLQ TTSNAFIVN GCAADLSVC 
ALWMPRLLR GGLLGLGLT VSLLSHCLV ALNRYLLIT RAPATYQAL 
YQRRHTAGM LALSWALAL GLVLLLPPW AHYPALLAA AALLAQTAL 
LLHCYLGIV RRVRVSVKR VSVRLSGLS VLLLCCVFL LATQPLVWV 
SLASGFSLP VPWGVQAAS WLLCCALSA LNPLLYTWR NEEFRRSVR 
SVLP


Click on each residue to open a popup with some information about it.

ConSurf Conservation Grade (See documentation): 

 n/a   1    2    3    4    5    6    7    8    9  




This receptor, from the same or other species and bound to the same or other ligands, is also present in the following networks:
Show PDB Class SubFamily Type SubType Species Orthosteric Ligand Other Ligand(s) Protein Partners Resolution Date DOI
7WZ4AOrphanOrphanGPR88Homo sapiens--Gi1/β1/γ232022-10-2610.1038/s41467-022-30081-5
7WZ4 (No Gprot) AOrphanOrphanGPR88Homo sapiens--32022-10-2610.1038/s41467-022-30081-5
7EJXAOrphanOrphanGPR88Homo sapiens-(1R;2R)-2-PCCAGi1/β1/γ22.42022-04-1310.1038/s41467-022-30081-5
7EJX (No Gprot) AOrphanOrphanGPR88Homo sapiens-(1R;2R)-2-PCCA2.42022-04-1310.1038/s41467-022-30081-5




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